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L3_082_000M1_scaffold_329

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Displaying items 1-30 of 53 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_082_000M1_scaffold_329_1
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

559..1923
DNA (1365bp) protein (455aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K6A047_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN09048.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
two-component system response regulator
L3_082_000M1_scaffold_329_2
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1920..2921
DNA (1002bp) protein (334aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WJ79_9PORP
two-component system sensor histidine kinase
L3_082_000M1_scaffold_329_3
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2887..5271)
DNA (2385bp) protein (795aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZCW7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN09050.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
integral membrane sensor signal transduction histidine kinase
L3_082_000M1_scaffold_329_4
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5371..7761)
DNA (2391bp) protein (797aa)
TonB-dependent receptor n=2 Tax=Parabacteroides RepID=A7ADY2_9PORP
TonB-dependent receptor {ECO:0000313|EMBL:EDN87274.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
TonB dependent outer membrane protein
L3_082_000M1_scaffold_329_5
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7842..8522
DNA (681bp) protein (227aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7ADY1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN87273.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_082_000M1_scaffold_329_6
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8517..8831)
DNA (315bp) protein (105aa)
Thioredoxin n=6 Tax=Parabacteroides RepID=A7ADY0_9PORP
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
thioredoxin
L3_082_000M1_scaffold_329_7
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8900..12700)
DNA (3801bp) protein (1267aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
DNA polymerase III, alpha subunit n=2 Tax=Parabacteroides merdae RepID=A7ADX9_9PORP
DNA polymerase III subunit alpha
L3_082_000M1_scaffold_329_8
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12828..13457
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y590_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13567.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_082_000M1_scaffold_329_9
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


13789..14244
DNA (456bp) protein (152aa)
50S ribosomal protein L13 n=6 Tax=Parabacteroides RepID=A7ADX7_9PORP
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|RuleBase:RU003878}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
rplM; 50S ribosomal protein L13
L3_082_000M1_scaffold_329_10
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


14250..14636
DNA (387bp) protein (129aa)
30S ribosomal protein S9 n=6 Tax=Parabacteroides RepID=A7ADX6_9PORP
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
rpsI; 30S ribosomal protein S9
L3_082_000M1_scaffold_329_11
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


14778..15620
DNA (843bp) protein (281aa)
30S ribosomal protein S2 n=5 Tax=Parabacteroides RepID=A7ADX5_9PORP
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
rpsB; 30S ribosomal protein S2
L3_082_000M1_scaffold_329_12
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15756..16745
DNA (990bp) protein (330aa)
Elongation factor Ts n=4 Tax=Parabacteroides RepID=A7ADX4_9PORP
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
tsf; elongation factor Ts
L3_082_000M1_scaffold_329_13
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16855..18048)
DNA (1194bp) protein (398aa)
Aminotransferase class I/II n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y4Z7_9PORP
Aminotransferase class I/II {ECO:0000313|EMBL:CDD13467.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
aspartate aminotransferase
L3_082_000M1_scaffold_329_14
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18074..19291)
DNA (1218bp) protein (406aa)
Riboflavin biosynthesis protein RibBA n=3 Tax=Parabacteroides RepID=A7ADX2_9PORP
Riboflavin biosynthesis protein RibBA {ECO:0000256|HAMAP-Rule:MF_01283, ECO:0000256|SAAS:SAAS00280052}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
3,4-dihydroxy-2-butanone 4-phosphate synthase
L3_082_000M1_scaffold_329_15
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19318..21255)
DNA (1938bp) protein (646aa)
Permease YjgP/YjgQ family n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X2Y4_9PORP
Permease YjgP/YjgQ family {ECO:0000313|EMBL:CDD13469.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_082_000M1_scaffold_329_16
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21357..21740)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WVY3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13470.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_082_000M1_scaffold_329_17
unknown

Not on your lists

21868..21978
DNA (111bp) protein (37aa)

This feature has no annotations

L3_082_000M1_scaffold_329_18
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22495..23418)
DNA (924bp) protein (308aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=A7ADW9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN87261.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
lipoprotein
L3_082_000M1_scaffold_329_19
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24479..26533
DNA (2055bp) protein (685aa)
Response regulator receiver domain protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y502_9PORP
Response regulator receiver domain protein {ECO:0000313|EMBL:CDD13472.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
two-component system sensor histidine kinase/response regulator
L3_082_000M1_scaffold_329_20
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26946..28214
DNA (1269bp) protein (423aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WQ76_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13473.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
fimbrilin
L3_082_000M1_scaffold_329_21
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28458..29669
DNA (1212bp) protein (404aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X2Z0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13474.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
fimbrilin
L3_082_000M1_scaffold_329_22
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29706..30608
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WVY9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13475.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
lipoprotein
L3_082_000M1_scaffold_329_23
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30645..32675
DNA (2031bp) protein (677aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XAW5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13476.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L3_082_000M1_scaffold_329_24
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32688..33803
DNA (1116bp) protein (372aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=A7ADW3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN87255.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_082_000M1_scaffold_329_25
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33861..35198
DNA (1338bp) protein (446aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WQ82_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13478.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_082_000M1_scaffold_329_26
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35421..36509
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X2Z6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13479.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L3_082_000M1_scaffold_329_27
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36563..38071
DNA (1509bp) protein (503aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WVZ5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13480.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L3_082_000M1_scaffold_329_28
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38556..40667
DNA (2112bp) protein (704aa)
VirE N-terminal domain protein n=2 Tax=Parabacteroides merdae RepID=A7ADV9_9PORP
VirE N-terminal domain protein {ECO:0000313|EMBL:EDN87251.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
putative helicase
L3_082_000M1_scaffold_329_29
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

40786..41181
DNA (396bp) protein (132aa)
Uncharacterized protein n=5 Tax=Parabacteroides RepID=A7ADV8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN87250.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_082_000M1_scaffold_329_30
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

41415..41972
DNA (558bp) protein (186aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6BPV7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13488.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
Displaying items 1-30 of 53 in total

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