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L3_082_000M1_scaffold_105

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Displaying items 1-30 of 148 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_082_000M1_scaffold_105_1
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

115..825
DNA (711bp) protein (237aa)
Helix-turn-helix domain protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D4Q0_9FIRM
Helix-turn-helix domain protein {ECO:0000313|EMBL:CCX73774.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
hypothetical protein
L3_082_000M1_scaffold_105_2
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

1007..1624
DNA (618bp) protein (206aa)
Peptidase M56 family n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D0P4_9FIRM
Peptidase M56 family {ECO:0000313|EMBL:CCX73775.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
L3_082_000M1_scaffold_105_3
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

1778..3535
DNA (1758bp) protein (586aa)
Oligoendopeptidase pepF/M3 family n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5DCZ6_9FIRM
Oligoendopeptidase pepF/M3 family {ECO:0000313|EMBL:CCX73776.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
pepF/M3 family oligoendopeptidase
L3_082_000M1_scaffold_105_4
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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3731..7303
DNA (3573bp) protein (1191aa)
Chromosome partition protein Smc n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HJP1_9FIRM
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
smc; chromosome segregation protein SMC
L3_082_000M1_scaffold_105_5
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

7338..8207
DNA (870bp) protein (290aa)
Signal recognition particle receptor FtsY n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D0R1_9FIRM
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
ftsY; signal recognition particle receptor
L3_082_000M1_scaffold_105_6
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

8220..8942
DNA (723bp) protein (241aa)
Ribonuclease PH {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104182}; Short=RNase PH {ECO:0000256|HAMAP-Rule:MF_00564};; EC=2.7.7.56 {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104188};; tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_00564}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
rph; ribonuclease PH (EC:2.7.7.56)
Ribonuclease PH n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5DAE1_9FIRM
L3_082_000M1_scaffold_105_7
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists


8942..9532
DNA (591bp) protein (197aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate diphosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
rdgB; nucleoside-triphosphatase (EC:3.6.1.15)
Non-canonical purine NTP pyrophosphatase n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D4S5_9FIRM
L3_082_000M1_scaffold_105_8
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

9534..9854
DNA (321bp) protein (107aa)
RNA-binding protein YhbY family n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D0R5_9FIRM
RNA-binding protein YhbY family {ECO:0000313|EMBL:CCX73800.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
hypothetical protein
L3_082_000M1_scaffold_105_9
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

9856..11043
DNA (1188bp) protein (396aa)
Nicotinate-nucleotide adenylyltransferase {ECO:0000256|SAAS:SAAS00086517}; EC=2.7.7.18 {ECO:0000256|SAAS:SAAS00086517};; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
nadD; nicotinate-nucleotide adenylyltransferase (EC:2.7.7.18)
Probable nicotinate-nucleotide adenylyltransferase n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5DAE6_9FIRM
L3_082_000M1_scaffold_105_10
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

11040..11408
DNA (369bp) protein (123aa)
Ribosomal silencing factor RsfS n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D0T8_9FIRM
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
hypothetical protein
L3_082_000M1_scaffold_105_11
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists


11748..14174
DNA (2427bp) protein (809aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
leuS; leucyl-tRNA synthetase (EC:6.1.1.4)
Leucine--tRNA ligase n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D0S0_9FIRM
L3_082_000M1_scaffold_105_12
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

14473..15915
DNA (1443bp) protein (481aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5CY89_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX72863.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
L3_082_000M1_scaffold_105_13
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

16111..16296
DNA (186bp) protein (62aa)
30S ribosomal protein S21 n=2 Tax=environmental samples RepID=R5D261_9FIRM
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
rpsU; 30S ribosomal protein S21
L3_082_000M1_scaffold_105_14
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

comp(16356..17132)
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5CY78_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX72865.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
hypothetical protein
L3_082_000M1_scaffold_105_15
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

17269..17772
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5DAI6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX72866.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
hypothetical protein
L3_082_000M1_scaffold_105_16
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

17918..18484
DNA (567bp) protein (189aa)
Elongation factor P n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D7P9_9FIRM
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
efp; elongation factor P
L3_082_000M1_scaffold_105_17
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

18520..18942
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5CY94_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX72868.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
hypothetical protein
L3_082_000M1_scaffold_105_18
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

comp(19058..19552)
DNA (495bp) protein (165aa)
Acetyltransferase GNAT family n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D265_9FIRM
Acetyltransferase GNAT family {ECO:0000313|EMBL:CCX72869.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
hypothetical protein
L3_082_000M1_scaffold_105_19
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

19840..21729
DNA (1890bp) protein (630aa)
1,4-alpha-glucan branching enzyme GlgB {ECO:0000256|HAMAP-Rule:MF_00685}; EC=2.4.1.18 {ECO:0000256|HAMAP-Rule:MF_00685};; 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase {ECO:0000256|HAMAP-Rule:MF_00685}; Alpha-(1->4)-glucan branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; Glycogen branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
glgB; 1,4-alpha-glucan-branching enzyme (EC:2.4.1.18)
1,4-alpha-glucan branching enzyme GlgB n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5CY83_9FIRM
L3_082_000M1_scaffold_105_20
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

21726..22937
DNA (1212bp) protein (404aa)
Glucose-1-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565}; EC=2.7.7.27 {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565};; ADP-glucose pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00624}; ADP-glucose synthase {ECO:0000256|HAMAP-Rule:MF_00624}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
glgC; glucose-1-phosphate adenylyltransferase (EC:2.7.7.27)
Glucose-1-phosphate adenylyltransferase n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5DAJ2_9FIRM
L3_082_000M1_scaffold_105_21
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

22934..24049
DNA (1116bp) protein (372aa)
glgD; glycogen biosynthesis protein GlgD (EC:2.7.7.27)
Glycogen biosynthesis protein GlgD n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D7Q5_9FIRM
Glycogen biosynthesis protein GlgD {ECO:0000313|EMBL:CCX72872.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
L3_082_000M1_scaffold_105_22
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

24105..25526
DNA (1422bp) protein (474aa)
Glycogen synthase {ECO:0000256|HAMAP-Rule:MF_00484}; EC=2.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00484};; Starch [bacterial glycogen] synthase {ECO:0000256|HAMAP-Rule:MF_00484}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
glgA; glycogen synthase (EC:2.4.1.21)
Glycogen synthase n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5CY99_9FIRM
L3_082_000M1_scaffold_105_23
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

25555..27972
DNA (2418bp) protein (806aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
glgP; glycogen phosphorylase (EC:2.4.1.1)
Phosphorylase n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D270_9FIRM
L3_082_000M1_scaffold_105_24
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

comp(28076..29341)
DNA (1266bp) protein (422aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
Trigger factor n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5CY88_9FIRM
tig; trigger factor
L3_082_000M1_scaffold_105_25
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

29523..30212
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5DAJ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX72876.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
PAP2 superfamily.
L3_082_000M1_scaffold_105_26
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

30190..30840
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D7R2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX72877.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
hypothetical protein
L3_082_000M1_scaffold_105_27
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

30979..31821
DNA (843bp) protein (281aa)
Putative dihydroorotate dehydrogenase electron transfer subunit n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5CYA3_9FIRM
Putative dihydroorotate dehydrogenase electron transfer subunit {ECO:0000313|EMBL:CCX72878.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
pyrK; putative dihydroorotate dehydrogenase electron transfer subunit
L3_082_000M1_scaffold_105_28
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

31823..33223
DNA (1401bp) protein (467aa)
glutamate synthase (EC:1.4.1.13)
Glutamate synthase n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D276_9FIRM
Glutamate synthase {ECO:0000313|EMBL:CCX72879.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
L3_082_000M1_scaffold_105_29
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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33357..33734
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:105 RepID=R5DDL8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX74957.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
hypothetical protein
L3_082_000M1_scaffold_105_30
Haemophilus parainfluenzae, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33941..34471
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Haemophilus parainfluenzae HK2019 RepID=I3BCA3_HAEPA
Uncharacterized protein {ECO:0000313|EMBL:EIJ28996.1}; TaxID=1095746 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus parainfluenzae HK2019.;"
hypothetical protein
Displaying items 1-30 of 148 in total

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