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L3_082_000M1_scaffold_1321

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Displaying 28 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_082_000M1_scaffold_1321_1
unknown

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2..439
DNA (438bp) protein (146aa)

This feature has no annotations

L3_082_000M1_scaffold_1321_2
Ethanoligenens harbinense, Ethanoligenens, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(305..703)
DNA (399bp) protein (133aa)
mRNA interferase {ECO:0000256|PIRNR:PIRNR033490}; EC=3.1.-.- {ECO:0000256|PIRNR:PIRNR033490};; TaxID=663278 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ethanoligenens.;" source="Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033; / YUAN-3).;"
mRNA interferase n=1 Tax=Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) RepID=E6U4K1_ETHHY
transcriptional modulator of MazE/toxin MazF
L3_082_000M1_scaffold_1321_3
Clostridium sp. CAG:492, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1020..2267)
DNA (1248bp) protein (416aa)
N-acetylglucosaminyltransferase n=1 Tax=Clostridium sp. CAG:492 RepID=R5Z983_9CLOT
N-acetylglucosaminyltransferase {ECO:0000313|EMBL:CDA30661.1}; TaxID=1262813 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:492.;"
family 2 glycosyl transferase
L3_082_000M1_scaffold_1321_4
Ruminococcus sp. CAG:579, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2407..2982)
DNA (576bp) protein (192aa)
metal dependent phosphohydrolase (EC:3.1.3.5)
Metal dependent phosphohydrolase n=1 Tax=Ruminococcus sp. CAG:579 RepID=R6C880_9FIRM
Metal dependent phosphohydrolase {ECO:0000313|EMBL:CDA71770.1}; TaxID=1262963 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:579.;"
L3_082_000M1_scaffold_1321_5
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3190..4530
DNA (1341bp) protein (447aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9M4D2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS65561.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
integral membrane protein-like protein
L3_082_000M1_scaffold_1321_6
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4527..7109
DNA (2583bp) protein (861aa)
Uncharacterized protein n=1 Tax=Clostridium leptum CAG:27 RepID=R6NFD8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC04936.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
hypothetical protein
L3_082_000M1_scaffold_1321_7
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7140..7793
DNA (654bp) protein (218aa)
Channel protein, hemolysin III family n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EF63_9CLOT
Channel protein, hemolysin III family {ECO:0000313|EMBL:EEG29866.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
hlyIII; channel protein, hemolysin III family
L3_082_000M1_scaffold_1321_8
unknown

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comp(7893..8015)
DNA (123bp) protein (41aa)

This feature has no annotations

L3_082_000M1_scaffold_1321_9
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8034..9485
DNA (1452bp) protein (484aa)
SWIM zinc finger n=1 Tax=Clostridium sp. CAG:149 RepID=R5MP97_9CLOT
SWIM zinc finger {ECO:0000313|EMBL:CCY87111.1}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
SWIM zinc finger.
L3_082_000M1_scaffold_1321_10
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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9503..11440
DNA (1938bp) protein (646aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9X819_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY91831.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
hypothetical protein
L3_082_000M1_scaffold_1321_11
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11461..12552
DNA (1092bp) protein (364aa)
MoxR-like ATPases n=1 Tax=Clostridium sp. CAG:299 RepID=R6YPQ7_9CLOT
MoxR-like ATPases {ECO:0000313|EMBL:CDD37953.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
MoxR-like ATPases
L3_082_000M1_scaffold_1321_12
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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12552..14822
DNA (2271bp) protein (757aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P985_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS11954.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L3_082_000M1_scaffold_1321_13
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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14838..16016
DNA (1179bp) protein (393aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P986_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS11955.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
VWA domain containing CoxE-like protein.
L3_082_000M1_scaffold_1321_14
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16078..16947)
DNA (870bp) protein (290aa)
molecular chaperone Hsp33 n=1 Tax=Ruminococcus flavefaciens RepID=UPI0001C37BF6
hslO; 33 kDa chaperonin
33 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00117, ECO:0000256|SAAS:SAAS00038673}; Heat shock protein 33 homolog {ECO:0000256|HAMAP-Rule:MF_00117}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
L3_082_000M1_scaffold_1321_15
Ruminococcus champanellensis, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16984..17730)
DNA (747bp) protein (249aa)
Methyltransferase domain n=1 Tax=Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / 18P13) RepID=D4LCR4_RUMC1
Methyltransferase domain.
Methyltransferase domain {ECO:0000313|EMBL:CBL17409.1}; TaxID=213810 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / 18P13).;"
L3_082_000M1_scaffold_1321_16
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17748..18047)
DNA (300bp) protein (100aa)
TrpR family protein YerC/YecD n=1 Tax=Clostridium sp. CAG:242 RepID=R6D418_9CLOT
TrpR family protein YerC/YecD {ECO:0000313|EMBL:CDA78891.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
TrpR-related protein YerC/YecD
L3_082_000M1_scaffold_1321_17
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

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comp(18185..19411)
DNA (1227bp) protein (409aa)
tyrosyl-tRNA synthetase (EC:6.1.1.1)
Tyrosine--tRNA ligase id=3085946 bin=GWF2_Clostridiales_36_10 species=Clostridium leptum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_36_10 organism_group=Firmicute
Tax=GWF2_Clostridiales_36_10_curated
L3_082_000M1_scaffold_1321_18
Enterococcus mundtii, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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20310..21281
DNA (972bp) protein (324aa)
hypothetical protein n=1 Tax=Enterococcus mundtii RepID=UPI0002D39F19
iron (Fe) ABC superfamily ATP binding cassette transporter, binding protein
Iron ABC transporter substrate-binding protein {ECO:0000313|EMBL:EYT96815.1}; TaxID=1450511 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus mundtii CRL35.;"
L3_082_000M1_scaffold_1321_19
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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21278..22300
DNA (1023bp) protein (341aa)
corrinoid ABC transporter permease n=1 Tax=Butyrivibrio sp. AE2015 RepID=UPI0003B41CB4
Fe3+-siderophore ABC transporter permease
ABC-type Fe3+-siderophore transport system, permease component {ECO:0000313|EMBL:AEV70554.1}; Flags: Precursor;; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45).;"
L3_082_000M1_scaffold_1321_20
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22303..23073
DNA (771bp) protein (257aa)
iron ABC transporter n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2E377
ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component
ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component {ECO:0000313|EMBL:AEV70553.1}; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45).;"
L3_082_000M1_scaffold_1321_21
Enterococcus mundtii, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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23070..23600
DNA (531bp) protein (177aa)
Cob(I)yrinic acid a,c-diamide adenosyltransferase n=1 Tax=Enterococcus mundtii QU 25 RepID=V5XQH1_ENTMU
cob(I)yrinic acid a,c-diamide adenosyltransferase
Cob(I)yrinic acid a,c-diamide adenosyltransferase {ECO:0000313|EMBL:BAO07785.1}; TaxID=1300150 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus mundtii QU 25.;"
L3_082_000M1_scaffold_1321_22
Paenibacillus sp. JCM 10914, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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24009..24230
DNA (222bp) protein (74aa)
Transcriptional regulator, AbrB family n=1 Tax=Paenibacillus sp. JCM 10914 RepID=V9GAJ7_9BACL
Transcriptional regulator, AbrB family {ECO:0000313|EMBL:GAE06868.1}; TaxID=1236974 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. JCM 10914.;"
AbrB family transcriptional regulator
L3_082_000M1_scaffold_1321_23
Bacillus subtilis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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24252..24995
DNA (744bp) protein (248aa)
ABC-type multidrug transporter, ATPase component, putative n=2 Tax=Bacillus atrophaeus RepID=E3E2W7_BACA1
ABC transporter ATP-binding protein
ABC transporter family protein {ECO:0000313|EMBL:KFK81495.1}; TaxID=1495315 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus subtilis subsp. niger.;"
L3_082_000M1_scaffold_1321_24
Paenibacillus sp. JCM 10914, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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24992..25729
DNA (738bp) protein (246aa)
hypothetical protein n=1 Tax=Paenibacillus sp. OSY-SE RepID=UPI0003161C79
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1236974 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. JCM 10914.;"
ABC-2 type transporter family protein
L3_082_000M1_scaffold_1321_25
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25797..26222)
DNA (426bp) protein (142aa)
ACT domain protein n=2 Tax=Clostridium RepID=A7VYM7_9CLOT
ACT domain protein {ECO:0000313|EMBL:CDC03378.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
amino acid-binding ACT protein
L3_082_000M1_scaffold_1321_26
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(26250..26834)
DNA (585bp) protein (195aa)
iorB; putative indolepyruvate oxidoreductase subunit IorB (EC:1.2.7.8)
Indolepyruvate oxidoreductase subunit beta n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6VYT2_9FIRM
Indolepyruvate oxidoreductase subunit beta {ECO:0000313|EMBL:CDD02305.1}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
L3_082_000M1_scaffold_1321_27
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(26860..28605)
DNA (1746bp) protein (582aa)
Indolepyruvate oxidoreductase subunit IorA {ECO:0000256|PIRNR:PIRNR006439}; Short=IOR {ECO:0000256|PIRNR:PIRNR006439};; EC=1.2.7.8 {ECO:0000256|PIRNR:PIRNR006439};; Indolepyruvate ferredoxin oxidoreductase subunit alpha {ECO:0000256|PIRNR:PIRNR006439}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
indolepyruvate ferredoxin oxidoreductase, alpha subunit (EC:1.2.7.8)
Indolepyruvate ferredoxin oxidoreductase alpha subunit n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6W6C4_9FIRM
L3_082_000M1_scaffold_1321_28
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(28653..29582)
DNA (930bp) protein (310aa)
Phenylacetate-coenzyme A ligase {ECO:0000256|PIRNR:PIRNR006444}; EC=6.2.1.30 {ECO:0000256|PIRNR:PIRNR006444};; Phenylacetyl-CoA ligase {ECO:0000256|PIRNR:PIRNR006444}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
phenylacetate-CoA ligase (EC:6.2.1.30)
Phenylacetate-coenzyme A ligase n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HWY8_9FIRM
Displaying 28 items

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