ggKbase home page

L3_082_090G1_scaffold_1309

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_082_090G1_scaffold_1309_1
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


65..445
DNA (381bp) protein (127aa)
30S ribosomal protein S13 n=6 Tax=Bacteroides RepID=RS13_BACV8
rpsM; 30S ribosomal protein S13
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_082_090G1_scaffold_1309_2
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


457..846
DNA (390bp) protein (130aa)
30S ribosomal protein S11 n=14 Tax=Bacteroides RepID=RS11_BACV8
30S ribosomal protein S11
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_082_090G1_scaffold_1309_3
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


963..1568
DNA (606bp) protein (202aa)
30S ribosomal protein S4 n=11 Tax=Bacteroides RepID=RS4_BACV8
30S ribosomal protein S4
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=483217 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei DSM 17855.;"
L3_082_090G1_scaffold_1309_4
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1580..2572
DNA (993bp) protein (331aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=483217 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei DSM 17855.;"
DNA-directed RNA polymerase subunit alpha n=15 Tax=root RepID=RPOA_BACV8
DNA-directed RNA polymerase subunit alpha
L3_082_090G1_scaffold_1309_5
Bacteroides massiliensis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


2576..3064
DNA (489bp) protein (163aa)
50S ribosomal protein L17 n=6 Tax=Bacteroides RepID=RL17_BACV8
rplQ; 50S ribosomal protein L17
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=1235788 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides massiliensis dnLKV3.;"
L3_082_090G1_scaffold_1309_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3475..3900
DNA (426bp) protein (142aa)
Putative uncharacterized protein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4VBA5_BACVU
Uncharacterized protein {ECO:0000313|EMBL:KDS54181.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
hypothetical protein
L3_082_090G1_scaffold_1309_7
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4019..4558
DNA (540bp) protein (180aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6KYG7_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOR98570.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_082_090G1_scaffold_1309_8
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4653..6452)
DNA (1800bp) protein (600aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HBP9_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EOR98569.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
DNA mismatch repair protein MutS
L3_082_090G1_scaffold_1309_9
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6782..7453
DNA (672bp) protein (224aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=A6KYG5_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EET14456.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
L3_082_090G1_scaffold_1309_10
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7710..8168)
DNA (459bp) protein (153aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6KYG4_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOR98567.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_082_090G1_scaffold_1309_11
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8165..8695)
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9H3H4_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EOR98566.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
hypothetical protein
L3_082_090G1_scaffold_1309_12
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8936..9142)
DNA (207bp) protein (69aa)
Sigma-70 region 2 n=1 Tax=Bacteroides dorei 5_1_36/D4 RepID=C3R9M6_9BACE
RNA polymerase sigma factor, sigma-70 family protein {ECO:0000313|EMBL:KDS27848.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
RNA polymerase sigma70 factor
L3_082_090G1_scaffold_1309_13
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9129..9614)
DNA (486bp) protein (162aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=D1K422_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KDS54172.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
hypothetical protein
L3_082_090G1_scaffold_1309_14
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9951..10679)
DNA (729bp) protein (243aa)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=2 Tax=Bacteroides RepID=D1K423_9BACE
Short chain dehydrogenase family protein {ECO:0000313|EMBL:KDS27846.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
oxidoreductase
L3_082_090G1_scaffold_1309_15
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10706..11878)
DNA (1173bp) protein (391aa)
O-acetylhomoserine aminocarboxypropyltransferase (EC:2.5.1.49)
O-acetylhomoserine aminocarboxypropyltransferase n=1 Tax=Bacteroides vulgatus PC510 RepID=D4VBB4_BACVU
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase family protein {ECO:0000313|EMBL:KDS54170.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L3_082_090G1_scaffold_1309_16
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12001..12444
DNA (444bp) protein (148aa)
Putative uncharacterized protein n=1 Tax=Bacteroides dorei DSM 17855 RepID=B6W5H9_9BACE
Thioesterase superfamily protein {ECO:0000313|EMBL:KDS54169.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
acyl-CoA thioester hydrolase
L3_082_090G1_scaffold_1309_17
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12509..13237)
DNA (729bp) protein (243aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I9R0U8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KDS54168.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
hypothetical protein
L3_082_090G1_scaffold_1309_18
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13234..13518)
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9H3B7_BACVU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOR98557.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_082_090G1_scaffold_1309_19
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13511..14353)
DNA (843bp) protein (281aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=I8WCG9_9BACE
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EEB22747.1}; TaxID=483217 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei DSM 17855.;"
L3_082_090G1_scaffold_1309_20
Bacteroides dorei CAG:222, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14791..15036)
DNA (246bp) protein (82aa)
Creatininase n=1 Tax=Bacteroides vulgatus PC510 RepID=D4VBB9_BACVU
amidase
Uncharacterized protein {ECO:0000313|EMBL:CDB38068.1}; TaxID=1263042 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides dorei CAG:222.;"
L3_082_090G1_scaffold_1309_21
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15036..15497)
DNA (462bp) protein (154aa)
Amidase n=3 Tax=Bacteroides RepID=E5UPS1_9BACE
amidase
Uncharacterized protein {ECO:0000313|EMBL:EIY78692.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_082_090G1_scaffold_1309_22
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15497..16669)
DNA (1173bp) protein (391aa)
Alcohol dehydrogenase, iron-dependent n=5 Tax=Bacteroides RepID=D4VBC0_BACVU
Iron-containing alcohol dehydrogenase family protein {ECO:0000313|EMBL:KDS27839.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
alcohol dehydrogenase
Displaying 22 items

View Taxonomy