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L3_082_090G1_scaffold_5

Search features with annotation key words

Displaying items 1-30 of 320 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_082_090G1_scaffold_5_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..1063)
DNA (1062bp) protein (354aa)
Phage Tail Collar domain protein n=12 Tax=Escherichia coli RepID=M9DMM9_ECOLX
hypothetical protein
Putative variable tail fiber protein {ECO:0000313|EMBL:AFH10580.1}; TaxID=566546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain ATCC 9637 / CCM 2024 / DSM 1116 / NCIMB 8666; / NRRL B-766 / W).;"
L3_082_090G1_scaffold_5_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1060..1665)
DNA (606bp) protein (202aa)
Phage tail protein n=46 Tax=Enterobacteriaceae RepID=E2QQ86_ECOLX
phage tail protein
Phage tail protein I {ECO:0000313|EMBL:EZJ45194.1}; TaxID=1444258 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-005-03_S4_C3.;"
L3_082_090G1_scaffold_5_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1658..2566)
DNA (909bp) protein (303aa)
Baseplate J-like family protein n=22 Tax=Enterobacteriaceae RepID=E9ULM4_ECOLX
Baseplate J-like family protein {ECO:0000313|EMBL:KDX85800.1}; TaxID=1444181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C3.;"
Baseplate J family protein
L3_082_090G1_scaffold_5_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2553..2912)
DNA (360bp) protein (120aa)
Baseplate assembly protein W n=2 Tax=Enterobacteriaceae RepID=E6BAD6_ECOLX
Baseplate assembly protein W {ECO:0000313|EMBL:EFU95880.1}; TaxID=670892 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3431.;"
GPW/gp25 family protein
L3_082_090G1_scaffold_5_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2909..3487)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Escherichia coli SCI-07 RepID=H8DHX1_ECOLX
Baseplate assembly protein {ECO:0000313|EMBL:AIX62636.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
V; Baseplate assembly protein V (GpV)
L3_082_090G1_scaffold_5_6
Cronobacter dublinensis, Cronobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3575..4804
DNA (1230bp) protein (410aa)
AAA ATPase n=1 Tax=Escherichia coli STEC_C165-02 RepID=G1YMV2_ECOLX
Putative ATP binding protein SugR {ECO:0000313|EMBL:CCJ82929.1}; TaxID=1208656 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Cronobacter.;" source="Cronobacter dublinensis 1210.;"
hypothetical protein
L3_082_090G1_scaffold_5_7
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4804..5457
DNA (654bp) protein (218aa)
TIGR02646 family protein n=1 Tax=Escherichia coli UMEA 3671-1 RepID=T9R3D1_ECOLX
HNH endonuclease family protein
Uncharacterized protein {ECO:0000313|EMBL:EHT10888.1}; TaxID=883121 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca 10-5246.;"
L3_082_090G1_scaffold_5_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5652..6098)
DNA (447bp) protein (149aa)
Phage virion morphogenesis protein n=1 Tax=Escherichia coli STEC_C165-02 RepID=G1YMV0_ECOLX
phage tail completion protein
Phage virion morphogenesis protein {ECO:0000313|EMBL:EKJ80353.1}; TaxID=1169664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli AD30.;"
L3_082_090G1_scaffold_5_9
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6091..6522)
DNA (432bp) protein (144aa)
Phage tail completion protein R n=18 Tax=Enterobacteriaceae RepID=B5FS39_SALDC
gpR; phage tail completion protein R
P2 phage tail completion protein R {ECO:0000313|EMBL:EMR49784.1}; TaxID=1192688 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. enterica serovar Dublin str. UC16.;"
L3_082_090G1_scaffold_5_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6618..7046)
DNA (429bp) protein (143aa)
LysB family phage lysis regulatory protein n=5 Tax=Escherichia coli RepID=L2V8S5_ECOLX
regulatory protein
LysB family phage lysis regulatory protein {ECO:0000313|EMBL:ELC10820.1}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE10.;"
L3_082_090G1_scaffold_5_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7043..7558)
DNA (516bp) protein (172aa)
Lysozyme {ECO:0000256|RuleBase:RU003788}; EC=3.2.1.17 {ECO:0000256|RuleBase:RU003788};; TaxID=679204 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 145-7.;"
Lysozyme n=4 Tax=Escherichia coli RepID=E1IQZ7_ECOLX
glycoside hydrolase family protein
L3_082_090G1_scaffold_5_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7539..7754)
DNA (216bp) protein (72aa)
Possible secretory protein n=280 Tax=Enterobacteriaceae RepID=E2QQ94_ECOLX
nucE; secretory protein
Putative membrane protein {ECO:0000313|EMBL:EHU32770.1}; TaxID=868138 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2A.;"
L3_082_090G1_scaffold_5_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7758..7961)
DNA (204bp) protein (68aa)
Phage tail protein n=257 Tax=Enterobacteriaceae RepID=E2QQ95_ECOLX
phage tail protein
Phage Tail Protein X {ECO:0000313|EMBL:EFJ84618.1}; TaxID=749533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 84-1.;"
L3_082_090G1_scaffold_5_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7961..8425)
DNA (465bp) protein (155aa)
Head completion/stabilization protein (GpL) n=183 Tax=Enterobacteriaceae RepID=B7MYT4_ECO81
phage head completion protein
Phage head completion protein GPL {ECO:0000313|EMBL:EIH43619.1}; TaxID=869678 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 99.0741.;"
L3_082_090G1_scaffold_5_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8521..9171)
DNA (651bp) protein (217aa)
Terminase, endonuclease subunit n=15 Tax=Escherichia coli RepID=H9UVN7_ECOLX
Terminase, endonuclease subunit
Phage small terminase subunit {ECO:0000313|EMBL:EMX08746.1}; TaxID=1125634 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 174750.;"
L3_082_090G1_scaffold_5_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9175..10233)
DNA (1059bp) protein (353aa)
Minor capsid protein H1 and H2, major capsid protein N n=115 Tax=Enterobacteriaceae RepID=B7MJI5_ECO45
minor capsid protein H1 and H2, major capsid protein N*
Phage major capsid protein, P2 family {ECO:0000313|EMBL:KDX18197.1}; TaxID=1444180 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-210-07_S3_C3.;"
L3_082_090G1_scaffold_5_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10250..11083)
DNA (834bp) protein (278aa)
Phage capsid scaffolding protein n=39 Tax=Escherichia coli RepID=A7ZYC5_ECOHS
hypothetical protein
Phage capsid scaffolding (GPO) serine peptidase family protein {ECO:0000313|EMBL:ENC92818.1}; TaxID=1116072 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli P0301867.11.;"
L3_082_090G1_scaffold_5_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11226..12992
DNA (1767bp) protein (589aa)
Terminase, ATPase subunit n=136 Tax=Enterobacteriaceae RepID=A7ZYC4_ECOHS
P; Terminase, ATPase subunit (GpP)
Terminase, ATPase subunit {ECO:0000313|EMBL:EGU95200.1}; TaxID=796392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 79-10.;"
L3_082_090G1_scaffold_5_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12992..14026
DNA (1035bp) protein (345aa)
PBSX family phage portal protein n=1 Tax=Escherichia coli KOEGE 33 (68a) RepID=T8GIN4_ECOLX
capsid portal protein
Phage portal protein, PBSX family {ECO:0000313|EMBL:EIG79933.1}; TaxID=869669 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1.2741.;"
L3_082_090G1_scaffold_5_20
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14071..14616)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Escherichia coli KOEGE 33 (68a) RepID=T8GL60_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:ESJ81423.1}; TaxID=1182171 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. enterica serovar Braenderup str.; CFSAN000756.;"
hypothetical protein
L3_082_090G1_scaffold_5_21
Enterobacter sp. 35669, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14842..15684)
DNA (843bp) protein (281aa)
Uncharacterized protein n=5 Tax=Escherichia coli RepID=K3I540_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KJN34779.1}; TaxID=1619244 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. 35669.;"
L3_082_090G1_scaffold_5_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15684..15899)
DNA (216bp) protein (72aa)
Uncharacterized protein n=8 Tax=Escherichia coli RepID=E9U6C7_ECOLX
ABC-type multidrug transport system, ATPase component {ECO:0000313|EMBL:EGI41918.1}; TaxID=656444 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli TA280.;"
multidrug ABC transporter ATPase
L3_082_090G1_scaffold_5_23
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16170..16403)
DNA (234bp) protein (78aa)
Putative DinI-like damage-inducible protein n=3 Tax=Enterobacteriaceae RepID=B7MJJ0_ECO45
damage-inducible protein DinI
Prophage protein {ECO:0000313|EMBL:ELX22418.1}; TaxID=687914 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. enterica serovar Rissen str. 150.;"
L3_082_090G1_scaffold_5_24
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16414..16602)
DNA (189bp) protein (63aa)
Uncharacterized protein n=111 Tax=Enterobacteriaceae RepID=B7UMQ6_ECO27
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCT25808.1}; TaxID=1265649 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. enterica serovar Agona str. 16.H.08.;"
L3_082_090G1_scaffold_5_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16756..19170)
DNA (2415bp) protein (805aa)
Bacteriophage replication protein A domain protein n=4 Tax=Escherichia coli RepID=I2YJG3_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EOW26528.1}; TaxID=1182703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE107.;"
replication protein for prophage
L3_082_090G1_scaffold_5_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19167..20024)
DNA (858bp) protein (286aa)
retron adenine methylase (EC:2.1.1.72)
Site-specific DNA-methyltransferase (adenine-specific) {ECO:0000256|RuleBase:RU361257}; EC=2.1.1.72 {ECO:0000256|RuleBase:RU361257};; TaxID=1116135 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP021552.12.;"
Retron EC67 DNA adenine methylase n=1 Tax=Escherichia coli O9:H4 (strain HS) RepID=A7ZYB7_ECOHS
L3_082_090G1_scaffold_5_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20021..20323)
DNA (303bp) protein (101aa)
Uncharacterized protein n=19 Tax=Escherichia coli RepID=L2WMU9_ECOLX
hypothetical protein
ASCH domain protein {ECO:0000313|EMBL:EIH43903.1}; TaxID=869678 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 99.0741.;"
L3_082_090G1_scaffold_5_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20320..20547)
DNA (228bp) protein (76aa)
Predicted transcriptional regulator, TraR/DksA family n=266 Tax=root RepID=B7UMQ3_ECO27
hypothetical protein
TraR family phage/conjugal plasmid C-4 type zinc finger protein {ECO:0000313|EMBL:EOU94763.1}; TaxID=1169353 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE36.;"
L3_082_090G1_scaffold_5_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20547..20780)
DNA (234bp) protein (78aa)
Uncharacterized protein n=92 Tax=Enterobacteriaceae RepID=B7MJJ6_ECO45
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOV80088.1}; TaxID=1182677 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE70.;"
L3_082_090G1_scaffold_5_30
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20848..21189)
DNA (342bp) protein (114aa)
Uncharacterized protein n=13 Tax=Enterobacteriaceae RepID=L5VV47_SALPU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETX31103.1}; TaxID=1331043 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str.; FCAV198.;"
Displaying items 1-30 of 320 in total

View Taxonomy