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L3_082_090G1_scaffold_9

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Displaying items 1-30 of 251 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_082_090G1_scaffold_9_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(364..1503)
DNA (1140bp) protein (380aa)
Epoxyqueuosine reductase {ECO:0000256|HAMAP-Rule:MF_00916}; EC=1.17.99.6 {ECO:0000256|HAMAP-Rule:MF_00916};; Queuosine biosynthesis protein QueG {ECO:0000256|HAMAP-Rule:MF_00916}; TaxID=869672 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 97.0259.;"
Epoxyqueuosine reductase n=2 Tax=Escherichia coli RepID=L4KX56_ECOLX
yjeS; putative Fe-S electron transport protein
L3_082_090G1_scaffold_9_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1517..3049
DNA (1533bp) protein (511aa)
YjeF family domain-containing protein n=1 Tax=Escherichia coli KTE165 RepID=L4KY92_ECOLX
YjeF family domain-containing protein {ECO:0000313|EMBL:EOW89982.1}; TaxID=1181728 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE182.;"
yjeF; hypothetical protein
L3_082_090G1_scaffold_9_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3021..3482
DNA (462bp) protein (154aa)
tRNA threonylcarbamoyladenosine biosynthesis protein TsaE n=1100 Tax=Bacteria RepID=TSAE_ECO57
hypothetical protein
ADP-binding protein {ECO:0000313|EMBL:EZD90850.1}; TaxID=1446698 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O157:NM str. 08-4540.;"
L3_082_090G1_scaffold_9_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3501..4832
DNA (1332bp) protein (444aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
N-acetylmuramoyl-L-alanine amidase AmiB n=2 Tax=Escherichia coli RepID=L4KX22_ECOLX
N-acetylmuramoyl-L-alanine amidase AmiB {ECO:0000313|EMBL:EOW89984.1}; TaxID=1181728 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE182.;"
L3_082_090G1_scaffold_9_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4842..6689
DNA (1848bp) protein (616aa)
DNA mismatch repair protein MutL n=12 Tax=Escherichia coli RepID=L2XJQ4_ECOLX
mutL; DNA mismatch repair protein
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=1444258 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-005-03_S4_C3.;"
L3_082_090G1_scaffold_9_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6682..7632
DNA (951bp) protein (317aa)
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
tRNA dimethylallyltransferase n=142 Tax=Escherichia RepID=MIAA_ECO45
L3_082_090G1_scaffold_9_7
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7718..8026
DNA (309bp) protein (103aa)
RNA-binding protein Hfq n=1365 Tax=Enterobacteriaceae RepID=HFQ_ECO24
hfq; RNA chaperone protein
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=42897 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 2a.;"
L3_082_090G1_scaffold_9_8
Escherichia albertii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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8102..9382
DNA (1281bp) protein (427aa)
GTPase HflX n=371 Tax=Escherichia RepID=E2QKA7_ECOLX
putative GTPase HflX
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=502347 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia albertii (strain TW07627).;"
L3_082_090G1_scaffold_9_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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9468..10727
DNA (1260bp) protein (420aa)
HflK protein n=262 Tax=Escherichia RepID=B1LQJ4_ECOSM
hflK; FtsH protease regulator HflK
Protein HflK {ECO:0000313|EMBL:ELJ64862.1}; TaxID=1169364 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE85.;"
L3_082_090G1_scaffold_9_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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10730..11734
DNA (1005bp) protein (335aa)
Modulator of FtsH protease HflC n=1420 Tax=Bacteria RepID=HFLC_ECO57
hflC; modulator for HflB protease specific for phage lambda CII repressor
Modulator of FtsH protease HflC {ECO:0000256|PIRNR:PIRNR005651}; TaxID=1444153 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C2.;"
L3_082_090G1_scaffold_9_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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11816..12013
DNA (198bp) protein (66aa)
Uncharacterized protein YjeT n=1249 Tax=Enterobacteriaceae RepID=YJET_ECO57
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEO20565.1}; TaxID=1444212 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-366-08_S4_C1.;"
L3_082_090G1_scaffold_9_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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12117..13415
DNA (1299bp) protein (433aa)
purA; adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; TaxID=656393 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H299.;"
Adenylosuccinate synthetase n=1229 Tax=Bacteria RepID=PURA_ECO24
L3_082_090G1_scaffold_9_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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13620..14045
DNA (426bp) protein (142aa)
HTH-type transcriptional repressor NsrR n=1034 Tax=Enterobacteriaceae RepID=NSRR_ECO27
transcriptional repressor NsrR
HTH-type transcriptional repressor NsrR {ECO:0000256|HAMAP-Rule:MF_01177, ECO:0000256|SAAS:SAAS00010440}; TaxID=1444165 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S3_C2.;"
L3_082_090G1_scaffold_9_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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14084..16525
DNA (2442bp) protein (814aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895, ECO:0000313|EMBL:CDN85059.1}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
Ribonuclease R n=4 Tax=Escherichia coli RepID=L2Y2B8_ECOLX
ribonuclease R
L3_082_090G1_scaffold_9_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16616..17347
DNA (732bp) protein (244aa)
23S rRNA (guanosine-2'-O-)-methyltransferase RlmB {ECO:0000256|HAMAP-Rule:MF_01887}; EC=2.1.1.185 {ECO:0000256|HAMAP-Rule:MF_01887};; 23S rRNA (guanosine2251 2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01887}; 23S rRNA Gm2251 2'-O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01887}; TaxID=1125638 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP020980.1.;"
23S rRNA (guanosine-2'-O-)-methyltransferase RlmB n=1351 Tax=Enterobacteriaceae RepID=RLMB_ECO57
yjfH; 23S rRNA (guanosine-2'-O-) -methyltransferase rlmB
L3_082_090G1_scaffold_9_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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17474..17875
DNA (402bp) protein (134aa)
Uncharacterized protein n=429 Tax=Enterobacteriaceae RepID=J7R996_ECOLX
yjfI; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFK75058.1}; TaxID=749532 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 78-1.;"
L3_082_090G1_scaffold_9_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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17894..18592
DNA (699bp) protein (233aa)
Predicted transcriptional regulator effectorprotein n=10 Tax=Escherichia coli RepID=B7UQJ1_ECO27
yjfJ; transcriptional regulator effectorprotein
Putative alpha helical protein {ECO:0000313|EMBL:EGI12859.1}; TaxID=656417 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M605.;"
L3_082_090G1_scaffold_9_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18642..19301
DNA (660bp) protein (220aa)
Uncharacterized protein n=39 Tax=Escherichia coli RepID=D2NFV9_ECOS5
yjfK; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEJ53556.1}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
L3_082_090G1_scaffold_9_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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19319..19717
DNA (399bp) protein (133aa)
Inner membrane protein yjfL n=316 Tax=Escherichia RepID=E2QKB8_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDW27146.1}; TaxID=1444150 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-156-04_S3_C2.;"
L3_082_090G1_scaffold_9_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19727..20365
DNA (639bp) protein (213aa)
Uncharacterized protein yjfM n=125 Tax=Escherichia RepID=E2QKB9_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI57611.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
L3_082_090G1_scaffold_9_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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20368..21531
DNA (1164bp) protein (388aa)
Synthetase/amidase n=4 Tax=Escherichia coli RepID=L4KX77_ECOLX
Putative synthetase/amidase {ECO:0000313|EMBL:EGI12863.1}; TaxID=656417 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M605.;"
yjfC; synthetase/amidase
L3_082_090G1_scaffold_9_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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21615..23240
DNA (1626bp) protein (542aa)
Isovaleryl CoA dehydrogenase n=2 Tax=Escherichia coli RepID=L4KYB0_ECOLX
aidB; Isovaleryl CoA dehydrogenase
Putative acyl-CoA dehydrogenase AidB {ECO:0000313|EMBL:KEJ53560.1}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
L3_082_090G1_scaffold_9_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(23357..23632)
DNA (276bp) protein (92aa)
Uncharacterized protein YjfN n=1370 Tax=Enterobacteriaceae RepID=YJFN_ECO57
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEJ43071.1}; TaxID=1444266 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-427-07_S4_C3.;"
L3_082_090G1_scaffold_9_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(23781..24110)
DNA (330bp) protein (110aa)
Uncharacterized protein n=54 Tax=Escherichia RepID=D2NFW5_ECOS5
hypothetical protein
Putative lipoprotein {ECO:0000313|EMBL:EGI12866.1}; TaxID=656417 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M605.;"
L3_082_090G1_scaffold_9_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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24292..25041
DNA (750bp) protein (250aa)
Esterase yjfP n=2 Tax=Escherichia coli RepID=L4KY54_ECOLX
yjfP; Esterase
Esterase YjfP {ECO:0000313|EMBL:EGI12867.1}; TaxID=656417 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M605.;"
L3_082_090G1_scaffold_9_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(25038..25793)
DNA (756bp) protein (252aa)
HTH-type transcriptional regulator UlaR n=1288 Tax=Enterobacteriaceae RepID=ULAR_ECO24
ulaR; DNA-binding transcriptional dual regulator
HTH-type transcriptional regulator UlaR {ECO:0000256|HAMAP-Rule:MF_01563}; TaxID=1281237 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3304-1.;"
L3_082_090G1_scaffold_9_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(25901..26965)
DNA (1065bp) protein (355aa)
Probable L-ascorbate-6-phosphate lactonase UlaG {ECO:0000256|HAMAP-Rule:MF_01266}; EC=3.1.1.- {ECO:0000256|HAMAP-Rule:MF_01266};; L-ascorbate utilization protein G {ECO:0000256|HAMAP-Rule:MF_01266}; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
Uncharacterized protein n=43 Tax=Escherichia coli RepID=V0ABT9_ECOLX
L-ascorbate 6-phosphate lactonase
L3_082_090G1_scaffold_9_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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27320..28717
DNA (1398bp) protein (466aa)
Ascorbate-specific permease IIC component UlaA n=314 Tax=Escherichia RepID=ULAA_ECOL6
ulaA; ascorbate-specific permease IIC component
PTS protein {ECO:0000313|EMBL:EGB70566.1}; TaxID=656449 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli TW10509.;"
L3_082_090G1_scaffold_9_29
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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28733..29038
DNA (306bp) protein (102aa)
PTS system L-ascorbate-specific transporter subunit IIB (EC:2.7.1.69)
Ascorbate-specific phosphotransferase enzyme IIB component n=1024 Tax=Enterobacteriaceae RepID=ULAB_ECO57
PTS system L-ascorbate-specific transporter subunit IIB {ECO:0000313|EMBL:ELL68527.1}; TaxID=702978 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. enterica serovar Enteritidis str. SE30663.;"
L3_082_090G1_scaffold_9_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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29048..29512
DNA (465bp) protein (155aa)
Ascorbate-specific phosphotransferase enzyme IIA component n=742 Tax=Enterobacteriaceae RepID=ULAC_SHIBS
PTS system L-ascorbate-specific transporter subunit IIA
Ascorbate-specific phosphotransferase enzyme IIA component {ECO:0000313|EMBL:EQO53298.1}; TaxID=1280991 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 41 (4-2677849).;"
Displaying items 1-30 of 251 in total

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