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L3_082_090G1_scaffold_12

Search features with annotation key words

Displaying items 1-30 of 189 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_082_090G1_scaffold_12_1
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1..2835
DNA (2835bp) protein (945aa)
SusC/RagA family TonB-linked outer membrane protein n=7 Tax=Bacteroides RepID=I9BP65_BACFG
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EIZ01683.1}; TaxID=997881 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL05T12C13.;"
putative TonB dependent outer membrane exported protein
L3_082_090G1_scaffold_12_2
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2868..4367
DNA (1500bp) protein (500aa)
SusD family protein n=7 Tax=Bacteroides RepID=D1JRQ7_9BACE
hypothetical protein
Putative outer membrane protein probably involved in nutrient binding {ECO:0000313|EMBL:BAD47417.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
L3_082_090G1_scaffold_12_3
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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4908..7832
DNA (2925bp) protein (975aa)
SusC/RagA family TonB-linked outer membrane protein n=2 Tax=Bacteroides fragilis RepID=K1G1U7_BACFG
TonB-linked outer membrane , SusC/RagA family protein {ECO:0000313|EMBL:EXY86119.1}; TaxID=1339283 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3996 N(B) 6.;"
putative TonB dependent outer membrane protein
L3_082_090G1_scaffold_12_4
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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7867..9261
DNA (1395bp) protein (465aa)
SusD family protein n=1 Tax=Bacteroides sp. 2_1_16 RepID=D1JRQ9_9BACE
Starch-binding associating with outer membrane family protein {ECO:0000313|EMBL:EXY92319.1}; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
putative lipoprotein
L3_082_090G1_scaffold_12_5
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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9378..10631
DNA (1254bp) protein (418aa)
GTPase HflX n=10 Tax=Bacteroides RepID=E1WL65_BACF6
putative GTP-binding protein
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=1073387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 615.;"
L3_082_090G1_scaffold_12_6
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10656..12647
DNA (1992bp) protein (664aa)
Uncharacterized protein n=9 Tax=Bacteroides RepID=Q5LHM9_BACFN
Uncharacterized protein {ECO:0000313|EMBL:EYE47312.1}; TaxID=1339329 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S23L17.;"
hypothetical protein
L3_082_090G1_scaffold_12_7
Bacteroides sp. 2_1_16, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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12677..15190
DNA (2514bp) protein (838aa)
Peptidase family M1 n=1 Tax=Bacteroides sp. 2_1_16 RepID=D1JRR2_9BACE
Peptidase family M1 {ECO:0000313|EMBL:EEZ26126.1}; TaxID=469587 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_16.;"
pepN; putative aminopeptidase
L3_082_090G1_scaffold_12_8
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15614..17260
DNA (1647bp) protein (549aa)
Fumarate hydratase class I, anaerobic {ECO:0000313|EMBL:EXY86125.1}; EC=4.2.1.2 {ECO:0000313|EMBL:EXY86125.1};; TaxID=1339283 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3996 N(B) 6.;"
Anaerobic fumarate hydratase class I n=6 Tax=Bacteroides RepID=Q64YK2_BACFR
fumB; putative fumarate hydratase class I, anaerobic
L3_082_090G1_scaffold_12_9
Bacteroides sp. 2_1_16, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17393..18538
DNA (1146bp) protein (382aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=D1JRR5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEZ26129.1}; TaxID=469587 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_16.;"
putative transmembrane acyl-transferase protein
L3_082_090G1_scaffold_12_10
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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18563..20719
DNA (2157bp) protein (719aa)
Alpha-N-acetylglucosaminidase (NAGLU) n=1 Tax=Bacteroides sp. 2_1_16 RepID=D1JRR6_9BACE
Alpha-N-acetylglucosaminidase (NAGLU) C-terminal domain protein {ECO:0000313|EMBL:EXY92306.1}; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
putative alpha-N-acetylglucosaminidase
L3_082_090G1_scaffold_12_11
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20812..22479)
DNA (1668bp) protein (556aa)
Cationic amino acid transporter n=9 Tax=Bacteroides RepID=Q64YJ9_BACFR
Amino acid permease family protein {ECO:0000313|EMBL:EXY92315.1}; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
cationic amino acid transporter
L3_082_090G1_scaffold_12_12
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23007..24332)
DNA (1326bp) protein (442aa)
Uncharacterized protein n=10 Tax=Bacteroides RepID=C6I1G7_9BACE
tolC; putative outer membrane protein
Outer membrane efflux family protein {ECO:0000313|EMBL:EYB11165.1}; TaxID=1339310 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3783N1-6.;"
L3_082_090G1_scaffold_12_13
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24329..27364)
DNA (3036bp) protein (1012aa)
Multidrug efflux membrane fusion protein n=11 Tax=Bacteroides RepID=Q64YJ6_BACFR
putative AcrB/AcrD/AcrF family efflux transporter
Hydrophobe/amphiphile efflux-1 (HAE1) family RND transporter {ECO:0000313|EMBL:EIY99388.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
L3_082_090G1_scaffold_12_14
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27379..28461)
DNA (1083bp) protein (361aa)
Efflux transporter, RND family, MFP subunit n=14 Tax=Bacteroides RepID=C6I1G5_9BACE
putative HlyD-family efflux transporter component
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EYE56718.1}; TaxID=1339318 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S6L5.;"
L3_082_090G1_scaffold_12_15
Bacteroides sp. 2_1_16, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28830..29549)
DNA (720bp) protein (240aa)
CAAX amino terminal protease family protein n=4 Tax=Bacteroides RepID=D1JRS2_9BACE
CAAX amino terminal protease family protein {ECO:0000313|EMBL:EEZ26136.1}; TaxID=469587 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_16.;"
hypothetical protein
L3_082_090G1_scaffold_12_16
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30693..31625)
DNA (933bp) protein (311aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
Putative ribosome biogenesis GTPase RsgA n=2 Tax=Bacteroides RepID=D1JRS5_9BACE
putative ATP/GTP binding protein
L3_082_090G1_scaffold_12_17
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31722..32282)
DNA (561bp) protein (187aa)
Ribosome-recycling factor n=1 Tax=Bacteroides sp. 2_1_16 RepID=D1JRS6_9BACE
frr; putative ribosome recycling factor
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
L3_082_090G1_scaffold_12_18
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32661..33821
DNA (1161bp) protein (387aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=Q64YI4_BACFR
Uncharacterized protein {ECO:0000313|EMBL:EYB11172.1}; TaxID=1339310 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3783N1-6.;"
hypothetical protein
L3_082_090G1_scaffold_12_19
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34069..34779)
DNA (711bp) protein (237aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197270};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; TaxID=1339289 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3986 N(B)19.;"
Uridylate kinase n=14 Tax=Bacteroides RepID=PYRH_BACFN
putative uridylate kinase
L3_082_090G1_scaffold_12_20
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34828..36141)
DNA (1314bp) protein (438aa)
DNA-damage-inducible protein F n=5 Tax=Bacteroides RepID=Q64YI1_BACFR
DNA-damage-inducible protein F
MATE efflux family protein {ECO:0000313|EMBL:EIY51240.1}; TaxID=997878 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL03T00C08.;"
L3_082_090G1_scaffold_12_21
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36341..37663
DNA (1323bp) protein (441aa)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=I8XDE2_BACFG
Glycosyl hydrolases 16 family protein {ECO:0000313|EMBL:EXY86141.1}; TaxID=1339283 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3996 N(B) 6.;"
putative beta-glucanase precursor
L3_082_090G1_scaffold_12_22
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37778..38461
DNA (684bp) protein (228aa)
Uncharacterized protein n=3 Tax=Bacteroides fragilis RepID=Q64YH8_BACFR
hypothetical protein
TPR repeat family protein {ECO:0000313|EMBL:EXY86142.1}; TaxID=1339283 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3996 N(B) 6.;"
L3_082_090G1_scaffold_12_23
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38488..39798)
DNA (1311bp) protein (437aa)
Zinc-dependent metalloase lipoprotein, BF0631 family {ECO:0000313|EMBL:EXY92229.1}; EC=3.4.24.- {ECO:0000313|EMBL:EXY92229.1};; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
BF0631 family zinc-dependent metalloproteinase lipoprotein n=1 Tax=Bacteroides fragilis CAG:47 RepID=R7ABT4_9BACE
hypothetical protein
L3_082_090G1_scaffold_12_24
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(39864..40619)
DNA (756bp) protein (252aa)
Biotin--[acetyl-CoA-carboxylase] ligase n=3 Tax=Bacteroides RepID=D1JRT5_9BACE
putative biotin-(acetyl-CoA carboxylase) synthetase
Putative biotin-(Acetyl-CoA carboxylase) synthetase {ECO:0000313|EMBL:BAD47451.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
L3_082_090G1_scaffold_12_25
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(40603..40959)
DNA (357bp) protein (119aa)
Uncharacterized protein n=13 Tax=Bacteroides RepID=E1WL97_BACF6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EYB11181.1}; TaxID=1339310 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3783N1-6.;"
L3_082_090G1_scaffold_12_26
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(40966..41331)
DNA (366bp) protein (122aa)
UPF0102 protein BF0634 n=9 Tax=Bacteroides RepID=Y634_BACFN
UPF0102 protein M125_0992 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
hypothetical protein
L3_082_090G1_scaffold_12_27
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

41469..41702
DNA (234bp) protein (78aa)
Uncharacterized protein n=15 Tax=Bacteroides RepID=E1WL99_BACF6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAD47454.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
L3_082_090G1_scaffold_12_28
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

41707..42144
DNA (438bp) protein (146aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=1339289 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3986 N(B)19.;"
Possible cytosine deaminase n=12 Tax=Bacteroides RepID=E1WLA0_BACF6
cytosine deaminase
L3_082_090G1_scaffold_12_29
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(42161..42448)
DNA (288bp) protein (96aa)
Uncharacterized protein n=13 Tax=Bacteroides RepID=E1WLA1_BACF6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EXZ30085.1}; TaxID=1339327 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S36L11.;"
L3_082_090G1_scaffold_12_30
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(42511..43221)
DNA (711bp) protein (237aa)
CDP-diacylglycerol-serine O-phosphatidyltransferase n=11 Tax=Bacteroides RepID=Q64YG9_BACFR
putative phosphatidylserine synthase
CDP-diacylglycerol-serine O-phosphatidyltransferase {ECO:0000313|EMBL:CDD40142.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
Displaying items 1-30 of 189 in total

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