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L3_082_090G1_scaffold_39

Search features with annotation key words

Displaying items 1-30 of 103 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_082_090G1_scaffold_39_1
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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256..1299
DNA (1044bp) protein (348aa)
Efflux transporter, RND family, MFP subunit n=3 Tax=Bacteroides RepID=D1JW21_9BACE
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EXZ42391.1}; TaxID=1339280 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 2-F-2 #4.;"
component of multidrug efflux system
L3_082_090G1_scaffold_39_2
Bacteroides sp. 2_1_16, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1296..4328
DNA (3033bp) protein (1011aa)
RND transporter, HAE1/HME family, permease protein n=1 Tax=Bacteroides sp. 2_1_16 RepID=D1JW22_9BACE
RND transporter, HAE1/HME family, permease protein {ECO:0000313|EMBL:EEZ24064.1}; TaxID=469587 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_16.;"
putative transmembrane AcrB/D/F-family transporter
L3_082_090G1_scaffold_39_3
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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4331..5620
DNA (1290bp) protein (430aa)
Outer membrane efflux protein n=1 Tax=Bacteroides sp. 2_1_16 RepID=D1JW23_9BACE
Outer membrane efflux family protein {ECO:0000313|EMBL:EXY83011.1}; TaxID=1339283 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3996 N(B) 6.;"
outer membrane protein
L3_082_090G1_scaffold_39_4
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5663..6688
DNA (1026bp) protein (342aa)
Histidine kinase n=4 Tax=Bacteroides RepID=D1JW24_9BACE
Histidine kinase family protein {ECO:0000313|EMBL:EXY63562.1}; TaxID=1339289 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3986 N(B)19.;"
putative two-component system sensor, no kinase domain
L3_082_090G1_scaffold_39_5
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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6681..7454
DNA (774bp) protein (258aa)
Two-component system response regulator n=12 Tax=Bacteroides RepID=Q64MN2_BACFR
putative two-component response regulator
Response regulator {ECO:0000313|EMBL:EYE41487.1}; TaxID=1339329 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S23L17.;"
L3_082_090G1_scaffold_39_6
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7692..8003)
DNA (312bp) protein (104aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=D1JW26_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY90032.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
L3_082_090G1_scaffold_39_7
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(8007..8492)
DNA (486bp) protein (162aa)
Transcriptional regulator, AsnC family n=4 Tax=Bacteroides RepID=E4W160_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EIY90033.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
putative AsnC-family transcriptional regulatory protein
L3_082_090G1_scaffold_39_8
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8538..8627)
DNA (90bp) protein (30aa)
Uncharacterized protein n=8 Tax=Bacteroides RepID=I0PYP4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY41211.1}; TaxID=997878 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL03T00C08.;"
L3_082_090G1_scaffold_39_9
Bacteroides sp. 2_1_16, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(8664..9533)
DNA (870bp) protein (290aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915, ECO:0000256|RuleBase:RU004231}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=469587 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_16.;"
Peptidyl-prolyl cis-trans isomerase n=3 Tax=Bacteroides RepID=D1JW28_9BACE
putative isomerase
L3_082_090G1_scaffold_39_10
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(9554..10138)
DNA (585bp) protein (195aa)
fklB; putative FkbP-type 22 kDa peptidyl-prolyl cis-trans isomerase (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=997878 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL03T00C08.;"
Peptidyl-prolyl cis-trans isomerase n=12 Tax=Bacteroides RepID=E1WSG3_BACF6
L3_082_090G1_scaffold_39_11
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10605..11315
DNA (711bp) protein (237aa)
NAD-dependent protein deacylase {ECO:0000256|HAMAP-Rule:MF_01121}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_01121};; Regulatory protein SIR2 homolog {ECO:0000256|HAMAP-Rule:MF_01121}; TaxID=1339283 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3996 N(B) 6.;"
NAD-dependent protein deacylase n=1 Tax=Bacteroides sp. 2_1_16 RepID=D1JW30_9BACE
cobB; putative nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase
L3_082_090G1_scaffold_39_12
Bacteroides sp. 2_1_16, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11249..12022)
DNA (774bp) protein (258aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EEZ24073.1}; EC=2.4.-.- {ECO:0000313|EMBL:EEZ24073.1};; TaxID=469587 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_16.;"
Uncharacterized protein n=5 Tax=Bacteroides RepID=C6IAU3_9BACE
putative glycosyltransferase
L3_082_090G1_scaffold_39_13
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12015..13280)
DNA (1266bp) protein (422aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=I3HPY1_BACFG
putative glycosyltransferase
Uncharacterized protein {ECO:0000313|EMBL:EIY90039.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
L3_082_090G1_scaffold_39_14
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13385..14587
DNA (1203bp) protein (401aa)
UDP-N-acetyl-D-mannosamine dehydrogenase n=12 Tax=Bacteroides RepID=Q64MP0_BACFR
putative UDP-N-acetyl-D-mannosamine dehydrogenase
Nucleotide sugar dehydrogenase family protein {ECO:0000313|EMBL:EYA16954.1}; TaxID=1339337 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 1007-1-F #3.;"
L3_082_090G1_scaffold_39_15
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14642..15772
DNA (1131bp) protein (377aa)
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:EYB07332.1}; EC=5.1.3.14 {ECO:0000313|EMBL:EYB07332.1};; TaxID=1339310 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3783N1-6.;"
UDP-N-acetylglucosamine 2-epimerase n=8 Tax=Bacteroides RepID=E1WSF8_BACF6
putative UDP-N-acetylglucosamine 2-epimerase
L3_082_090G1_scaffold_39_16
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15824..16471)
DNA (648bp) protein (216aa)
Uncharacterized protein n=11 Tax=Bacteroides RepID=Q64MP2_BACFR
putative transmembrane protein
Uncharacterized protein {ECO:0000313|EMBL:EYB07331.1}; TaxID=1339310 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3783N1-6.;"
L3_082_090G1_scaffold_39_17
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16540..17739)
DNA (1200bp) protein (400aa)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=I9V2Q0_BACFG
Glycosyl transferases group 1 family protein {ECO:0000313|EMBL:EXY87828.1}; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
putative glycosyltransferase
L3_082_090G1_scaffold_39_18
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17739..18749)
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis CAG:47 RepID=R7A5K8_9BACE
Putative glycosyltransferase {ECO:0000313|EMBL:EXY87832.1}; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
putative exopolysaccharide biosynthesis protein
L3_082_090G1_scaffold_39_19
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18759..19946)
DNA (1188bp) protein (396aa)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=I8WTN1_BACFG
Glycosyl transferases group 1 family protein {ECO:0000313|EMBL:EXY87831.1}; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
putative glycosyltransferase
L3_082_090G1_scaffold_39_20
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19950..21470)
DNA (1521bp) protein (507aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=I3HPY8_BACFG
Uncharacterized protein {ECO:0000313|EMBL:CDD38009.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
putative O-antigen repeat unit transporter
L3_082_090G1_scaffold_39_21
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(21486..23525)
DNA (2040bp) protein (680aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00098}; TaxID=1339283 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3996 N(B) 6.;"
Methionine--tRNA ligase n=8 Tax=Bacteroides RepID=SYM_BACFR
metG; putative methionyl-tRNA synthetase
L3_082_090G1_scaffold_39_22
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23689..24777)
DNA (1089bp) protein (363aa)
Uncharacterized protein n=9 Tax=Bacteroides RepID=Q64MP9_BACFR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAD51238.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
L3_082_090G1_scaffold_39_23
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24794..25147)
DNA (354bp) protein (118aa)
Uncharacterized protein n=8 Tax=Bacteroides RepID=Q64MQ0_BACFR
hypothetical protein
Putative exported protein {ECO:0000313|EMBL:CBW24863.1}; TaxID=862962 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain 638R).;"
L3_082_090G1_scaffold_39_24
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25222..26157
DNA (936bp) protein (312aa)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=I3HPZ2_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EXY87817.1}; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
putative transmembrane anchored hypothetical protein
L3_082_090G1_scaffold_39_25
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27087..28481
DNA (1395bp) protein (465aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=Q5L7J2_BACFN
Uncharacterized protein {ECO:0000313|EMBL:EXY82299.1}; TaxID=1339283 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3996 N(B) 6.;"
hypothetical protein
L3_082_090G1_scaffold_39_26
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28662..30731
DNA (2070bp) protein (690aa)
Uncharacterized protein n=3 Tax=Bacteroides fragilis RepID=I3HPZ5_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EIY90053.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
putative CoA-binding protein
L3_082_090G1_scaffold_39_27
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30831..31319
DNA (489bp) protein (163aa)
Uncharacterized protein n=9 Tax=Bacteroides RepID=Q5L7J4_BACFN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDD39564.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
L3_082_090G1_scaffold_39_28
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31309..32394
DNA (1086bp) protein (362aa)
Radical SAM additional 4Fe4S-binding domain-containing protein n=5 Tax=Bacteroides fragilis RepID=I9AXZ5_BACFG
putative radical SAM-family protein
Putative heme biosynthesis protein {ECO:0000313|EMBL:BAD51229.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
L3_082_090G1_scaffold_39_29
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32496..36485
DNA (3990bp) protein (1330aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_56FAA RepID=F7LVL5_9BACE
Response regulator {ECO:0000313|EMBL:EXY82295.1}; TaxID=1339283 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3996 N(B) 6.;"
putative two-component system sensor kinase/response regulator fusion protein
L3_082_090G1_scaffold_39_30
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36638..38671
DNA (2034bp) protein (678aa)
Uncharacterized protein n=8 Tax=Bacteroides RepID=Q5L7J7_BACFN
Uncharacterized protein {ECO:0000313|EMBL:EIY41233.1}; TaxID=997878 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL03T00C08.;"
hypothetical protein
Displaying items 1-30 of 103 in total

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