ggKbase home page

L3_082_090G1_scaffold_42

Search features with annotation key words

Displaying items 1-30 of 108 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_082_090G1_scaffold_42_1
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2..151
DNA (150bp) protein (50aa)
Uncharacterized protein n=1 Tax=Bacteroides ovatus CL02T12C04 RepID=I9SQ47_BACOV
Two-component system sensor histidine kinase/response regulator, hybrid (One-component system) {ECO:0000313|EMBL:EFI12135.1}; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
Signal transduction histidine kinase
L3_082_090G1_scaffold_42_2
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(91..1368)
DNA (1278bp) protein (426aa)
ATP-binding protein n=2 Tax=Bacteroides RepID=D7J8A7_9BACE
ATP-binding protein {ECO:0000313|EMBL:EFI12134.1}; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
putative ATPase (AAA+ superfamily)
L3_082_090G1_scaffold_42_3
Bacteroides sp. 1_1_30, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1896..2669)
DNA (774bp) protein (258aa)
Radical SAM domain protein n=8 Tax=Bacteroides RepID=A7LYD6_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EGN07587.1}; TaxID=457387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_30.;"
Fe-S oxidoreductases
L3_082_090G1_scaffold_42_4
Bacteroides sp. 1_1_30, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2785..4896)
DNA (2112bp) protein (704aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 1_1_30 RepID=F7M219_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGN07586.1}; TaxID=457387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_30.;"
hypothetical protein
L3_082_090G1_scaffold_42_5
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4922..7270)
DNA (2349bp) protein (783aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=C3Q9X2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDO11641.1}; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
hypothetical protein
L3_082_090G1_scaffold_42_6
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7286..8953)
DNA (1668bp) protein (556aa)
Uncharacterized protein n=1 Tax=Bacteroides ovatus ATCC 8483 RepID=A7LYD3_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EDO11640.1}; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
hypothetical protein
L3_082_090G1_scaffold_42_7
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8971..9654)
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Bacteroides ovatus ATCC 8483 RepID=A7LYD2_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EDO11639.1}; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
hypothetical protein
L3_082_090G1_scaffold_42_8
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9664..11187)
DNA (1524bp) protein (508aa)
Uncharacterized protein n=1 Tax=Bacteroides ovatus ATCC 8483 RepID=A7LYD1_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EDO11638.1}; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
SusD family.
L3_082_090G1_scaffold_42_9
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11204..14557)
DNA (3354bp) protein (1118aa)
TonB-linked outer membrane protein, SusC/RagA family n=1 Tax=Bacteroides ovatus ATCC 8483 RepID=A7LYD0_BACOV
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EDO11637.1}; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
Outer membrane receptor proteins, mostly Fe transport
L3_082_090G1_scaffold_42_10
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14690..15868)
DNA (1179bp) protein (393aa)
Sigma factor regulatory protein, FecR/PupR family n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WBF2_BACOV
Sigma factor regulatory protein, FecR/PupR family {ECO:0000313|EMBL:EFF54123.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
Fe2+-dicitrate sensor, membrane component
L3_082_090G1_scaffold_42_11
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15900..16409)
DNA (510bp) protein (170aa)
RNA polymerase sigma-70 factor n=6 Tax=Bacteroides RepID=A7LYC8_BACOV
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:EDO11635.1}; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
RNA polymerase sigma factor, sigma-70 family/RNA polymerase sigma-70 factor, Bacteroides expansion family 1
L3_082_090G1_scaffold_42_12
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16453..18501)
DNA (2049bp) protein (683aa)
Putative uncharacterized protein n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WBF0_BACOV
Putative uncharacterized protein {ECO:0000313|EMBL:EFF54121.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
hypothetical protein
L3_082_090G1_scaffold_42_13
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18620..19225
DNA (606bp) protein (202aa)
Uncharacterized protein n=9 Tax=Bacteroides RepID=C3Q9Y0_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK67336.1}; TaxID=657309 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens XB1A.;"
L3_082_090G1_scaffold_42_14
Bacteroides sp. D1, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19585..20112)
DNA (528bp) protein (176aa)
rRNA methylases n=11 Tax=Bacteroides RepID=D6CYT3_9BACE
rRNA methylases
RNA methyltransferase, TrmH family {ECO:0000313|EMBL:EEO48765.1}; TaxID=556258 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D1.;"
L3_082_090G1_scaffold_42_15
Bacteroides ovatus CAG:22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20614..21552
DNA (939bp) protein (313aa)
Quinolinate synthase A {ECO:0000256|HAMAP-Rule:MF_00568}; EC=2.5.1.72 {ECO:0000256|HAMAP-Rule:MF_00568};; TaxID=1263050 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides ovatus CAG:22.;"
Quinolinate synthase A n=5 Tax=Bacteroides RepID=D6CYT2_9BACE
quinolinate synthetase A
L3_082_090G1_scaffold_42_16
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21697..22539)
DNA (843bp) protein (281aa)
OmpA family protein n=5 Tax=Bacteroides RepID=C3Q9Y4_9BACE
Flagellar motor protein MotB {ECO:0000313|EMBL:EFI12120.1}; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
Flagellar motor protein
L3_082_090G1_scaffold_42_17
Bacteroides sp. 2_1_22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(22571..23155)
DNA (585bp) protein (195aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate diphosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; TaxID=469588 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_22.;"
non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family (EC:3.6.1.15)
Non-canonical purine NTP pyrophosphatase n=4 Tax=Bacteroides RepID=C3Q9Y5_9BACE
L3_082_090G1_scaffold_42_18
Bacteroides sp. D1, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23203..24120)
DNA (918bp) protein (306aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=C3Q9Y6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEO48770.1}; TaxID=556258 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D1.;"
hypothetical protein
L3_082_090G1_scaffold_42_19
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24245..27079)
DNA (2835bp) protein (945aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
leucyl-tRNA synthetase (EC:6.1.1.4)
Leucine--tRNA ligase n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WBE3_BACOV
L3_082_090G1_scaffold_42_20
Bacteroides sp. D1, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27289..27441
DNA (153bp) protein (51aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. D1 RepID=C3Q9Y8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEO48772.2}; TaxID=556258 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D1.;"
L3_082_090G1_scaffold_42_21
Bacteroides sp. 1_1_30, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27815..30385
DNA (2571bp) protein (857aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 1_1_30 RepID=F7M241_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGN07518.1}; TaxID=457387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_30.;"
Alpha-L-rhamnosidase N-terminal domain./Bacterial alpha-L-rhamnosidase.
L3_082_090G1_scaffold_42_22
Bacteroides sp. 1_1_30, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30519..31415)
DNA (897bp) protein (299aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 1_1_30 RepID=F7M240_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGN07517.1}; TaxID=457387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_30.;"
HEPN domain.
L3_082_090G1_scaffold_42_23
Bacteroides sp. 1_1_30, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31453..33204)
DNA (1752bp) protein (584aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 1_1_30 RepID=F7M239_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGN07516.1}; TaxID=457387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_30.;"
Protein of unknown function (DUF1703)./Predicted AAA-ATPase.
L3_082_090G1_scaffold_42_24
Bacteroides sp. D1, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33335..34210
DNA (876bp) protein (292aa)
Putative membrane protein n=5 Tax=Bacteroides RepID=C3Q9Z2_9BACE
Putative membrane protein {ECO:0000313|EMBL:EEO48776.1}; TaxID=556258 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D1.;"
Permeases of the drug/metabolite transporter (DMT) superfamily
L3_082_090G1_scaffold_42_25
Bacteroides sp. 1_1_30, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34247..34669
DNA (423bp) protein (141aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I9AEK3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGN07514.1}; TaxID=457387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_30.;"
L3_082_090G1_scaffold_42_26
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34856..35992)
DNA (1137bp) protein (379aa)
Alkaline phosphatase family protein n=2 Tax=Bacteroides ovatus RepID=A7LYB1_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY71128.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
Alkaline phosphatase
L3_082_090G1_scaffold_42_27
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36006..37109)
DNA (1104bp) protein (368aa)
Ser/Thr phosphatase family protein n=2 Tax=Bacteroides RepID=D4W9B3_BACOV
Ser/Thr phosphatase family protein {ECO:0000313|EMBL:EFF54809.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
hypothetical protein
L3_082_090G1_scaffold_42_28
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37116..39374)
DNA (2259bp) protein (753aa)
Uncharacterized protein n=1 Tax=Bacteroides xylanisolvens CL03T12C04 RepID=I9AFM3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY86152.1}; TaxID=997892 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens CL03T12C04.;"
alpha-1,2-mannosidase, putative
L3_082_090G1_scaffold_42_29
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

39605..42796
DNA (3192bp) protein (1064aa)
Outer membrane receptor for ferrienterochelin and colicins n=1 Tax=Bacteroides xylanisolvens XB1A RepID=D6CYR9_9BACE
Outer membrane receptor for ferrienterochelin and colicins
Outer membrane receptor for ferrienterochelin and colicins {ECO:0000313|EMBL:CBK67321.1}; TaxID=657309 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens XB1A.;"
L3_082_090G1_scaffold_42_30
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

42809..44491
DNA (1683bp) protein (561aa)
Uncharacterized protein n=1 Tax=Bacteroides xylanisolvens CL03T12C04 RepID=I9AEJ8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY86150.1}; TaxID=997892 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens CL03T12C04.;"
hypothetical protein
Displaying items 1-30 of 108 in total

View Taxonomy