ggKbase home page

L3_082_090G1_scaffold_69

Search features with annotation key words

Displaying items 1-30 of 99 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_082_090G1_scaffold_69_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(249..938)
DNA (690bp) protein (230aa)
Uncharacterized protein n=10 Tax=Escherichia coli RepID=L2XKT7_ECOLX
Putative TPR repeat protein {ECO:0000313|EMBL:EGI13202.1}; TaxID=656417 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M605.;"
hypothetical protein
L3_082_090G1_scaffold_69_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1048..1752)
DNA (705bp) protein (235aa)
Dipeptide ABC transporter, ATP binding protein n=12 Tax=Escherichia coli RepID=E7UCB0_ECOLX
Putative ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EGI13203.1}; TaxID=656417 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M605.;"
ATPase
L3_082_090G1_scaffold_69_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1739..2575)
DNA (837bp) protein (279aa)
Oligopeptide ABC transporter ATP-binding protein n=8 Tax=Escherichia coli RepID=L2XKW3_ECOLX
ABC transporter ATP-binding protein
Putative ATP-binding component of dipeptide transport system {ECO:0000313|EMBL:EGI13204.1}; TaxID=656417 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M605.;"
L3_082_090G1_scaffold_69_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2568..3401)
DNA (834bp) protein (278aa)
ABC transporter permease n=2 Tax=Escherichia coli RepID=L4KYV5_ECOLX
putative dipeptide/nickel transporter, Inner membrane permease subunit (yddQ)
Transporter permease {ECO:0000313|EMBL:CKH44446.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L3_082_090G1_scaffold_69_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3401..4450)
DNA (1050bp) protein (350aa)
ABC transporter permease n=254 Tax=Escherichia coli RepID=G7R9N9_ECOC2
yddR; ABC transporter permease
ABC transporter permease {ECO:0000313|EMBL:EQP43860.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L3_082_090G1_scaffold_69_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4550..6118)
DNA (1569bp) protein (523aa)
ABC transporter substrate-binding protein n=5 Tax=Escherichia coli RepID=L4KXT3_ECOLX
peptide ABC transporter substrate binding component
Peptide ABC transporter substrate binding component {ECO:0000313|EMBL:BAI57497.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
L3_082_090G1_scaffold_69_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6493..8172)
DNA (1680bp) protein (560aa)
fdhF1; Putative formate dehydrogenase H subunit (EC:1.2.1.2)
Formate dehydrogenase {ECO:0000313|EMBL:AJO86196.1}; Formate dehydrogenase-H subunit alpha {ECO:0000313|EMBL:CKH44573.1}; EC=1.2.1.2 {ECO:0000313|EMBL:CKH44573.1};; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
Formate dehydrogenase-H, selenopolypeptide subunit n=335 Tax=Escherichia RepID=E2QJX1_ECOLX
L3_082_090G1_scaffold_69_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8221..8640)
DNA (420bp) protein (140aa)
Formate dehydrogenase-H, selenopolypeptide subunit n=335 Tax=Escherichia RepID=E2QJX1_ECOLX
formate dehydrogenase subunit alpha
Formate dehydrogenase H {ECO:0000313|EMBL:EOV73805.1}; TaxID=1182680 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE73.;"
L3_082_090G1_scaffold_69_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8838..10304)
DNA (1467bp) protein (489aa)
Multidrug resistance outer membrane protein mdtP n=1 Tax=Escherichia coli KTE165 RepID=L4KYW0_ECOLX
hypothetical protein
Multidrug resistance outer membrane protein mdtP {ECO:0000313|EMBL:EOV52522.1}; TaxID=1182671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE64.;"
L3_082_090G1_scaffold_69_10
Escherichia coli CAG:4, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10301..12352)
DNA (2052bp) protein (684aa)
Multidrug resistance protein MdtO n=1 Tax=Escherichia coli KTE165 RepID=L4KWS6_ECOLX
Multidrug resistance protein MdtO {ECO:0000313|EMBL:CDC84097.1}; TaxID=1263075 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia; environmental samples.;" source="Escherichia coli CAG:4.;"
mdtO; Membrane fusion component of tripartite multidrug resistance system
L3_082_090G1_scaffold_69_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12352..13383)
DNA (1032bp) protein (344aa)
Multidrug resistance protein mdtN n=1 Tax=Escherichia coli KTE165 RepID=L4KXT8_ECOLX
multidrug resistance protein MdtN
Multidrug resistance protein MdtN {ECO:0000313|EMBL:AJO86200.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L3_082_090G1_scaffold_69_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13402..13677)
DNA (276bp) protein (92aa)
Uncharacterized protein n=16 Tax=Escherichia coli RepID=D2NFK3_ECOS5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI57503.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
L3_082_090G1_scaffold_69_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13886..15871)
DNA (1986bp) protein (662aa)
Alkyl sulfatase n=4 Tax=Escherichia coli RepID=L4KY01_ECOLX
Putative metallo-beta-lactamase domain protein {ECO:0000313|EMBL:EGI13214.1}; TaxID=656417 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M605.;"
hypothetical protein
L3_082_090G1_scaffold_69_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16143..17072)
DNA (930bp) protein (310aa)
D-allose kinase {ECO:0000256|HAMAP-Rule:MF_00988, ECO:0000313|EMBL:CDN84955.1}; Short=Allokinase {ECO:0000256|HAMAP-Rule:MF_00988};; EC=2.7.1.55 {ECO:0000256|HAMAP-Rule:MF_00988};; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
D-allose kinase n=3 Tax=Escherichia coli RepID=L2Y214_ECOLX
D-allose kinase
L3_082_090G1_scaffold_69_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17056..17751)
DNA (696bp) protein (232aa)
Allulose-6-phosphate 3-epimerase {ECO:0000313|EMBL:CKH44878.1}; EC=5.1.3.- {ECO:0000313|EMBL:CKH44878.1};; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
D-allulose-6-phosphate 3-epimerase n=311 Tax=Escherichia RepID=E2QJX8_ECOLX
D-allulose-6-phosphate 3-epimerase
L3_082_090G1_scaffold_69_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17762..18742)
DNA (981bp) protein (327aa)
D-allose ABC transporter, permease component n=159 Tax=Escherichia RepID=G0DBT9_ECOLX
yjcV; D-allose ABC transporter, permease component
D-allose transport system permease protein AlsC {ECO:0000313|EMBL:ESD39138.1}; TaxID=1268991 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908519.;"
L3_082_090G1_scaffold_69_17
Escherichia coli CAG:4, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18721..20253)
DNA (1533bp) protein (511aa)
D-allose import ATP-binding protein AlsA n=8 Tax=Escherichia RepID=L2XN44_ECOLX
D-allose import ATP-binding protein AlsA {ECO:0000313|EMBL:CDC84114.1}; TaxID=1263075 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia; environmental samples.;" source="Escherichia coli CAG:4.;"
D-allose ABC transporter ATP-binding component
L3_082_090G1_scaffold_69_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20381..21316)
DNA (936bp) protein (312aa)
D-allose ABC transporter, substrate-binding component n=39 Tax=Escherichia RepID=G0DBU1_ECOLX
yjcX; D-allose ABC transporter, substrate-binding component
D-allose-binding periplasmic protein (ALBP) {ECO:0000313|EMBL:EGI13219.1}; TaxID=656417 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M605.;"
L3_082_090G1_scaffold_69_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21375..22265)
DNA (891bp) protein (297aa)
HTH-type transcriptional regulator RpiR n=644 Tax=Escherichia RepID=RPIR_ECOL6
RpiR family transcriptional regulator
HTH-type transcriptional regulator rpiR {ECO:0000313|EMBL:EHU29596.1}; TaxID=868136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1D.;"
L3_082_090G1_scaffold_69_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22624..23073
DNA (450bp) protein (150aa)
Ribose 5-phosphate isomerase B {ECO:0000313|EMBL:EFR17574.1}; EC=5.3.1.6 {ECO:0000313|EMBL:EFR17574.1};; TaxID=670897 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2362-75.;"
Ribose-5-phosphate isomerase B n=122 Tax=Escherichia RepID=E2QJY3_ECOLX
rpiB; ribose 5-phosphate isomerase B/allose 6-phosphate isomerase
L3_082_090G1_scaffold_69_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23142..23489
DNA (348bp) protein (116aa)
Uncharacterized protein n=6 Tax=Escherichia coli RepID=T7LZ81_ECOLX
membrane protein
Uncharacterized protein {ECO:0000313|EMBL:CDL45308.1}; TaxID=1432559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC41.;"
L3_082_090G1_scaffold_69_22
Escherichia coli CAG:4, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23517..24275)
DNA (759bp) protein (253aa)
Protein phnP n=8 Tax=Escherichia RepID=L2XN48_ECOLX
Phosphonate metabolism protein PhnP {ECO:0000313|EMBL:CDC84123.1}; TaxID=1263075 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia; environmental samples.;" source="Escherichia coli CAG:4.;"
phnP; carbon-phosphorus lyase complex accessory protein
L3_082_090G1_scaffold_69_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24277..24711)
DNA (435bp) protein (145aa)
Acyltransferase n=1 Tax=Escherichia coli KTE165 RepID=L4KY11_ECOLX
phnO; aminoalkylphosphonic acid N-acetyltransferase
Putative acyltransferase with acyl-CoA N-acyltransferase domain {ECO:0000313|EMBL:CAR05752.1}; TaxID=585035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O45:K1 (strain S88 / ExPEC).;"
L3_082_090G1_scaffold_69_24
Escherichia coli CAG:4, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24698..25255)
DNA (558bp) protein (186aa)
Ribose 1,5-bisphosphate phosphokinase PhnN {ECO:0000256|HAMAP-Rule:MF_00836}; EC=2.7.4.23 {ECO:0000256|HAMAP-Rule:MF_00836};; Ribose 1,5-bisphosphokinase {ECO:0000256|HAMAP-Rule:MF_00836}; TaxID=1263075 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia; environmental samples.;" source="Escherichia coli CAG:4.;"
Ribose 1,5-bisphosphate phosphokinase PhnN n=58 Tax=Escherichia RepID=E0R4N7_ECOLX
ribose 1,5-bisphosphokinase
L3_082_090G1_scaffold_69_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25255..26391)
DNA (1137bp) protein (379aa)
Phosphonate metabolism protein PhnM n=1 Tax=Escherichia coli KTE165 RepID=L4KWU3_ECOLX
Phosphonate metabolism protein PhnM {ECO:0000313|EMBL:EGI13226.1}; TaxID=656417 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M605.;"
phnM; carbon-phosphorus lyase complex subunit PhnM
L3_082_090G1_scaffold_69_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26388..27068)
DNA (681bp) protein (227aa)
Phosphonates transport ATP-binding protein phnL n=209 Tax=Escherichia RepID=E2QJY9_ECOLX
phnL; Phosphonates transport ATP-binding protein PhnL
Phosphonate ABC transporter ATP-binding component {ECO:0000313|EMBL:BAI57517.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
L3_082_090G1_scaffold_69_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27179..27937)
DNA (759bp) protein (253aa)
Phosphonates transport ATP-binding protein phnK n=330 Tax=Escherichia RepID=E2QJZ0_ECOLX
phnK; phosphonate C-P lyase system protein PhnK
Phosphonate C-P lyase system protein PhnK {ECO:0000313|EMBL:EHU05485.1}; TaxID=868134 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1B.;"
L3_082_090G1_scaffold_69_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27934..28779)
DNA (846bp) protein (282aa)
Phosphonate metabolism protein n=100 Tax=Escherichia coli RepID=B6I5X0_ECOSE
phnJ; carbon-phosphorus lyase complex subunit
Phosphonate metabolism protein PhnJ {ECO:0000313|EMBL:EGI13229.1}; TaxID=656417 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M605.;"
L3_082_090G1_scaffold_69_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28772..29836)
DNA (1065bp) protein (355aa)
PhnI, carbon-phosphorus lyase complex subunit n=157 Tax=Escherichia RepID=A1AIU6_ECOK1
phnI; PhnI protein
Bacterial phosphonate metabolism family protein {ECO:0000313|EMBL:KEJ53811.1}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
L3_082_090G1_scaffold_69_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29836..30420)
DNA (585bp) protein (195aa)
Phosphonate metabolism protein n=76 Tax=Escherichia RepID=D2NFM1_ECOS5
phnH; phosphonate C-P lyase system protein PhnH
Protein phnH {ECO:0000313|EMBL:EQP43886.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
Displaying items 1-30 of 99 in total

View Taxonomy