ggKbase home page

L3_082_090G1_scaffold_76

Search features with annotation key words

Displaying items 1-30 of 96 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_082_090G1_scaffold_76_1
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2..562
DNA (561bp) protein (187aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=E1YUY7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KDS74588.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
transcriptional regulator UpxY-like protein
L3_082_090G1_scaffold_76_2
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

603..992
DNA (390bp) protein (130aa)
Uncharacterized protein n=4 Tax=Bacteroidales RepID=E1YVI4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EFK62123.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
hypothetical protein
L3_082_090G1_scaffold_76_3
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1408..1578
DNA (171bp) protein (57aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=E1YVI5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EFK62124.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
L3_082_090G1_scaffold_76_4
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1548..1694
DNA (147bp) protein (49aa)
Uncharacterized protein n=5 Tax=Parabacteroides RepID=C7XB03_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN29374.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
L3_082_090G1_scaffold_76_5
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1767..2411
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6IMV3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KEJ86342.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
capsular polysaccharide biosynthesis glycosyltransferase
L3_082_090G1_scaffold_76_6
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2462..2650
DNA (189bp) protein (63aa)
Uncharacterized protein n=3 Tax=Bacteroidales RepID=E1YVI7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EFK62126.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
hypothetical protein
L3_082_090G1_scaffold_76_7
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2873..4312
DNA (1440bp) protein (480aa)
Lipopolysaccharide biosynthesis protein n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7ITP6_9BACE
Lipopolysaccharide biosynthesis protein {ECO:0000313|EMBL:EFI08196.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
polysaccharide transporter/flippase
L3_082_090G1_scaffold_76_8
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4355..6283
DNA (1929bp) protein (643aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=E1YVI9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EFK62128.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
haloacid dehalogenase domain-containing protein hydrolase
L3_082_090G1_scaffold_76_9
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6322..7143
DNA (822bp) protein (274aa)
Glycosyltransferase n=3 Tax=Bacteroidales RepID=D7ITP8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EKN20734.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
family 2 glycosyl transferase
L3_082_090G1_scaffold_76_10
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7143..8174
DNA (1032bp) protein (344aa)
Uncharacterized protein n=3 Tax=Bacteroidales RepID=E1YVJ1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EFK62130.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
putative O-antigen polymerase
L3_082_090G1_scaffold_76_11
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8188..9306
DNA (1119bp) protein (373aa)
Glycosyltransferase, group 1 family protein {ECO:0000313|EMBL:EFK62131.1}; EC=2.4.-.- {ECO:0000313|EMBL:EFK62131.1};; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
Mannosyltransferase B n=3 Tax=Bacteroidales RepID=D7ITQ0_9BACE
glycosyltransferase
L3_082_090G1_scaffold_76_12
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9340..10797
DNA (1458bp) protein (486aa)
Radical SAM domain protein n=2 Tax=Parabacteroides RepID=E1YVJ3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN20737.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
Fe-S oxidoreductase
L3_082_090G1_scaffold_76_13
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10813..11565
DNA (753bp) protein (251aa)
Glycosyltransferase, group 2 family protein n=2 Tax=Parabacteroides RepID=E1YVJ4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN20738.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
glycosyl transferase family protein
L3_082_090G1_scaffold_76_14
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11796..12023
DNA (228bp) protein (76aa)
Uncharacterized protein n=4 Tax=Bacteroidales RepID=E1YVJ5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EFK62134.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
hypothetical protein
L3_082_090G1_scaffold_76_15
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12161..13279
DNA (1119bp) protein (373aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6IMU1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDB50590.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
hypothetical protein
L3_082_090G1_scaffold_76_16
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13287..14423
DNA (1137bp) protein (379aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=C7XB18_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEU51445.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
transmembrane protein
L3_082_090G1_scaffold_76_17
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14478..15662
DNA (1185bp) protein (395aa)
L-serine dehydratase, iron-sulfur-dependent, single chain form n=8 Tax=Bacteroidales RepID=A6LBN5_PARD8
L-serine dehydratase
L-serine dehydratase, iron-sulfur-dependent, single chain form {ECO:0000313|EMBL:EFI08206.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L3_082_090G1_scaffold_76_18
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15702..16706
DNA (1005bp) protein (335aa)
Glycoside hydrolase family 43, candidate beta-glycosidase n=2 Tax=Parabacteroides RepID=A6LBN4_PARD8
glycoside hydrolase family protein
Glycoside hydrolase family 43, candidate beta-glycosidase {ECO:0000313|EMBL:ABR43098.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_082_090G1_scaffold_76_19
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16917..17546
DNA (630bp) protein (210aa)
Transcriptional regulator, TetR family n=1 Tax=Parabacteroides sp. D13 RepID=C7XB21_9PORP
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EEU51448.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
transcriptional regulator
L3_082_090G1_scaffold_76_20
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17584..18870
DNA (1287bp) protein (429aa)
Outer membrane efflux protein n=1 Tax=Parabacteroides sp. D13 RepID=C7XB22_9PORP
Outer membrane efflux protein {ECO:0000313|EMBL:EEU51449.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
outer membrane efflux protein
L3_082_090G1_scaffold_76_21
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18898..19788
DNA (891bp) protein (297aa)
Uncharacterized protein n=6 Tax=Bacteroidales RepID=C7XB23_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN20746.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
hypothetical protein
L3_082_090G1_scaffold_76_22
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19781..20686
DNA (906bp) protein (302aa)
ABC transporter, ATP-binding protein n=2 Tax=Bacteroidales RepID=D0TBF2_9BACE
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEY84565.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
ABC transporter ATP-binding protein
L3_082_090G1_scaffold_76_23
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20955..21689
DNA (735bp) protein (245aa)
ABC transporter, ATP-binding protein n=3 Tax=Parabacteroides RepID=E1YVK4_9PORP
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFK62143.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
ybhF; putative ABC transporter ATP-binding protein YbhF
L3_082_090G1_scaffold_76_24
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21693..22778
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis CL03T12C09 RepID=K6AHA9_9PORP
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
ABC transporter permease
L3_082_090G1_scaffold_76_25
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22782..23873
DNA (1092bp) protein (364aa)
ABC-2 type transporter n=6 Tax=root RepID=C7XB27_9PORP
ABC transporter membrane protein
ABC-2 type transporter {ECO:0000313|EMBL:EEU51454.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_082_090G1_scaffold_76_26
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23937..25256
DNA (1320bp) protein (440aa)
Transporter, gluconate:H+ symporter family n=1 Tax=Parabacteroides sp. D13 RepID=C7XB28_9PORP
Transporter, gluconate:H+ symporter family {ECO:0000313|EMBL:EEU51455.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
H+/gluconate symporter and related permease
L3_082_090G1_scaffold_76_27
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25275..25796
DNA (522bp) protein (174aa)
Uncharacterized protein n=9 Tax=Bacteroidales RepID=A6LBM6_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDS74618.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_082_090G1_scaffold_76_28
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25837..26310
DNA (474bp) protein (158aa)
Endoribonuclease L-PSP n=6 Tax=Bacteroidales RepID=C7XB30_9PORP
translation initiation inhibitor
Uncharacterized protein {ECO:0000313|EMBL:EKN29344.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
L3_082_090G1_scaffold_76_29
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26314..27417
DNA (1104bp) protein (368aa)
D-threonine aldolase, metal-activated pyridoxal enzyme n=3 Tax=Bacteroidales RepID=A6LBM4_PARD8
D-threonine aldolase
D-threonine aldolase, metal-activated pyridoxal enzyme {ECO:0000313|EMBL:ABR43088.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_082_090G1_scaffold_76_30
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27465..28547
DNA (1083bp) protein (361aa)
Renal dipeptidase family protein n=2 Tax=Parabacteroides RepID=C7XB32_9PORP
peptidase
Putative peptidase {ECO:0000313|EMBL:ABR43087.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
Displaying items 1-30 of 96 in total

View Taxonomy