ggKbase home page

L3_082_090G1_scaffold_80

Search features with annotation key words

Displaying items 1-30 of 85 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_082_090G1_scaffold_80_1
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2..2986
DNA (2985bp) protein (995aa)
TonB-linked outer membrane protein, SusC/RagA family n=4 Tax=Bacteroides RepID=A7LZ07_BACOV
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EDO11179.1}; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
hypothetical protein
L3_082_090G1_scaffold_80_2
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3006..4460
DNA (1455bp) protein (485aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A7LZ08_BACOV
Putative lipoprotein {ECO:0000313|EMBL:EFF54543.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
hypothetical protein
L3_082_090G1_scaffold_80_3
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4563..5822
DNA (1260bp) protein (420aa)
GTPase HflX n=7 Tax=Bacteroides RepID=C3R1X8_9BACE
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
GTP-binding protein HflX
L3_082_090G1_scaffold_80_4
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5915..7906
DNA (1992bp) protein (664aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=A7LZ10_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EDO11182.1}; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
hypothetical protein
L3_082_090G1_scaffold_80_5
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8173..9810
DNA (1638bp) protein (546aa)
fumarase (EC:4.2.1.2)
Hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type n=6 Tax=Bacteroides RepID=A7LZ12_BACOV
Fumarate hydratase class I, anaerobic {ECO:0000313|EMBL:EIY55779.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
L3_082_090G1_scaffold_80_6
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9978..11072)
DNA (1095bp) protein (365aa)
Pectate lyase {ECO:0000313|EMBL:EDO11185.1}; EC=4.2.2.2 {ECO:0000313|EMBL:EDO11185.1};; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
Pectate lyase n=3 Tax=Bacteroides ovatus RepID=A7LZ13_BACOV
pectate lyase, PelA/Pel-15E family
L3_082_090G1_scaffold_80_7
Bacteroides ovatus CAG:22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11223..12563)
DNA (1341bp) protein (447aa)
Outer membrane protein n=5 Tax=Bacteroides RepID=D6D862_9BACE
Outer membrane protein
Uncharacterized protein {ECO:0000313|EMBL:CDB60271.1}; TaxID=1263050 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides ovatus CAG:22.;"
L3_082_090G1_scaffold_80_8
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12560..15592)
DNA (3033bp) protein (1011aa)
Cation/multidrug efflux pump n=6 Tax=Bacteroides RepID=D6D863_9BACE
Hydrophobe/amphiphile efflux-1 (HAE1) family RND transporter {ECO:0000313|EMBL:EIY55776.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
Cation/multidrug efflux pump
L3_082_090G1_scaffold_80_9
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15764..16852)
DNA (1089bp) protein (363aa)
RND family efflux transporter, MFP subunit n=6 Tax=Bacteroides RepID=D6D864_9BACE
RND family efflux transporter, MFP subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EDO11188.1}; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
L3_082_090G1_scaffold_80_10
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16992..17663)
DNA (672bp) protein (224aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=A7LZ17_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EDO11189.1}; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
hypothetical protein
L3_082_090G1_scaffold_80_11
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17741..18673)
DNA (933bp) protein (311aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
ribosome small subunit-dependent GTPase A (EC:3.6.1.-)
Putative ribosome biogenesis GTPase RsgA n=4 Tax=Bacteroides RepID=A7LZ18_BACOV
L3_082_090G1_scaffold_80_12
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18780..19340)
DNA (561bp) protein (187aa)
Ribosome-recycling factor n=16 Tax=Bacteroides RepID=D6D866_9BACE
ribosome recycling factor
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
L3_082_090G1_scaffold_80_13
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19392..20303)
DNA (912bp) protein (304aa)
Predicted permease, DMT superfamily n=10 Tax=Bacteroides RepID=D6D867_9BACE
Predicted permease, DMT superfamily
Putative integral membrane protein {ECO:0000313|EMBL:EFI37868.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
L3_082_090G1_scaffold_80_14
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20683..24714
DNA (4032bp) protein (1344aa)
Response regulator receiver domain protein n=3 Tax=Bacteroides RepID=D4W9Z4_BACOV
Response regulator receiver domain protein {ECO:0000313|EMBL:EFF54556.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
Signal transduction histidine kinase
L3_082_090G1_scaffold_80_15
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24846..27905
DNA (3060bp) protein (1020aa)
Putative uncharacterized protein n=1 Tax=Bacteroides ovatus 3_8_47FAA RepID=F7LFK5_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EGM99505.1}; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
Outer membrane receptor proteins, mostly Fe transport
L3_082_090G1_scaffold_80_16
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27920..29533
DNA (1614bp) protein (538aa)
SusD family protein n=6 Tax=Bacteroides RepID=C3R1Z1_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI37870.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
SusD family.
L3_082_090G1_scaffold_80_17
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29565..31673
DNA (2109bp) protein (703aa)
Conserved domain protein n=3 Tax=Bacteroides RepID=D4W9Z7_BACOV
Conserved domain protein {ECO:0000313|EMBL:EFF54559.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
Fibrobacter succinogenes major domain (Fib_succ_major).
L3_082_090G1_scaffold_80_18
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31685..34348
DNA (2664bp) protein (888aa)
Beta-galactosidase n=3 Tax=Bacteroides RepID=D7K5L7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGM99508.1}; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
Beta-galactosidase/beta-glucuronidase
L3_082_090G1_scaffold_80_19
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34352..35764
DNA (1413bp) protein (471aa)
Putative uncharacterized protein n=1 Tax=Bacteroides ovatus 3_8_47FAA RepID=F7LFK8_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EGM99509.1}; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
hypothetical protein
L3_082_090G1_scaffold_80_20
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35775..37328
DNA (1554bp) protein (518aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=R6JC05_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGM99510.1}; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
hypothetical protein
L3_082_090G1_scaffold_80_21
Bacteroides sp. 2_2_4, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37434..38144)
DNA (711bp) protein (237aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197270};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; TaxID=469590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_2_4.;"
Uridylate kinase n=4 Tax=Bacteroides RepID=C3R1Z7_9BACE
putative uridylate kinase
L3_082_090G1_scaffold_80_22
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38199..39527)
DNA (1329bp) protein (443aa)
MATE efflux family protein n=2 Tax=Bacteroides RepID=C3R1Z8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGM99512.1}; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
putative efflux protein, MATE family
L3_082_090G1_scaffold_80_23
Bacteroides sp. 2_2_4, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

39640..40323
DNA (684bp) protein (228aa)
Tetratricopeptide repeat protein n=1 Tax=Bacteroides sp. 2_2_4 RepID=C3R1Z9_9BACE
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EEO58233.1}; TaxID=469590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_2_4.;"
hypothetical protein
L3_082_090G1_scaffold_80_24
Bacteroides sp. 2_2_4, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(40358..41794)
DNA (1437bp) protein (479aa)
Peptidase, S41 family n=1 Tax=Bacteroides sp. 2_2_4 RepID=C3R200_9BACE
Peptidase, S41 family {ECO:0000313|EMBL:EEO58234.1}; TaxID=469590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_2_4.;"
peptidase S41
L3_082_090G1_scaffold_80_25
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(41881..42639)
DNA (759bp) protein (253aa)
birA, biotin-[acetyl-CoA-carboxylase] ligase region (EC:6.3.4.15)
Biotin-[acetyl-CoA-carboxylase] ligase n=1 Tax=Bacteroides ovatus CL03T12C18 RepID=I9SZI5_BACOV
Biotin-[acetyl-CoA-carboxylase] ligase {ECO:0000313|EMBL:EIY61841.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
L3_082_090G1_scaffold_80_26
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(42623..42979)
DNA (357bp) protein (119aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=C3R202_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY61840.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
hypothetical protein
L3_082_090G1_scaffold_80_27
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(43033..43398)
DNA (366bp) protein (122aa)
UPF0102 protein CUY_1463 n=4 Tax=Bacteroides RepID=D4WA07_BACOV
UPF0102 protein HMPREF1070_03793 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
Predicted endonuclease distantly related to archaeal Holliday junction resolvase
L3_082_090G1_scaffold_80_28
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

43466..43699
DNA (234bp) protein (78aa)
Uncharacterized protein n=17 Tax=Bacteroides RepID=A7LZ36_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY55756.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
hypothetical protein
L3_082_090G1_scaffold_80_29
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

43740..44177
DNA (438bp) protein (146aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
Cytidine and deoxycytidylate deaminase zinc-binding region n=9 Tax=Bacteroides RepID=A7LZ37_BACOV
Cytosine/adenosine deaminases
L3_082_090G1_scaffold_80_30
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(44193..44483)
DNA (291bp) protein (97aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=C3R207_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFF54572.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
hypothetical protein
Displaying items 1-30 of 85 in total

View Taxonomy