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L3_082_090G1_scaffold_87

Search features with annotation key words

Displaying items 1-30 of 133 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_082_090G1_scaffold_87_1
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

99..1118
DNA (1020bp) protein (340aa)
Uncharacterized protein n=3 Tax=Bifidobacterium RepID=R6GES8_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDB22895.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L3_082_090G1_scaffold_87_2
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1586..3148
DNA (1563bp) protein (521aa)
type I restriction-modification system methyltransferase subunit (EC:2.1.1.72)
Type I restriction-modification system methyltransferase subunit n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4NYL0_BIFBP
Type I restriction-modification system DNA methylase {ECO:0000313|EMBL:BAQ97389.1}; Type I restriction-modification system, M subunit {ECO:0000313|EMBL:ERI84089.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L3_082_090G1_scaffold_87_3
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3150..3923
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2CJ47_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:KFI42292.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
hypothetical protein
L3_082_090G1_scaffold_87_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3910..5094
DNA (1185bp) protein (395aa)
Type I restriction-modification system, specificity subunit S {ECO:0000313|EMBL:ESV32786.1}; EC=3.1.21.3 {ECO:0000313|EMBL:ESV32786.1};; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
Type I restriction-modification system, specificity subunit S n=1 Tax=Bifidobacterium longum E18 RepID=V6XWD6_BIFLN
type I restriction-modification system specificity determinant
L3_082_090G1_scaffold_87_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5209..6162
DNA (954bp) protein (318aa)
Abi family protein n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6H791_9BIFI
DNA-binding protein {ECO:0000313|EMBL:KEY31869.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
Abi family protein
L3_082_090G1_scaffold_87_6
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6254..9298
DNA (3045bp) protein (1015aa)
HsdR family type I site-specific deoxyribonuclease (EC:3.1.21.3)
Type I site-specific deoxyribonuclease, HsdR family n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2DWD0_BIFBI
Type I restriction-modification system endonuclease {ECO:0000313|EMBL:BAQ97392.1}; Type I site-specific deoxyribonuclease, HsdR family {ECO:0000313|EMBL:ERI84131.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L3_082_090G1_scaffold_87_7
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9786..10130
DNA (345bp) protein (115aa)
Mobilization protein n=4 Tax=Bifidobacterium RepID=E4NYL4_BIFBP
mobilization protein
Uncharacterized protein {ECO:0000313|EMBL:BAQ97393.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L3_082_090G1_scaffold_87_8
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10130..12022
DNA (1893bp) protein (631aa)
Relaxase n=3 Tax=Bifidobacterium RepID=E4NYL5_BIFBP
relaxase
Relaxase {ECO:0000313|EMBL:KFI42297.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L3_082_090G1_scaffold_87_9
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11964..12725
DNA (762bp) protein (254aa)
Uncharacterized protein n=3 Tax=Bifidobacterium RepID=T2HZK8_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCY96200.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L3_082_090G1_scaffold_87_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12976..14262)
DNA (1287bp) protein (429aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GST2_BIFLN
Membrane protein {ECO:0000313|EMBL:KFI72923.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
hypothetical protein
L3_082_090G1_scaffold_87_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14552..16072
DNA (1521bp) protein (507aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
Glutamate--tRNA ligase n=14 Tax=Bifidobacterium RepID=SYE_BIFLD
glutamyl-tRNA synthetase
L3_082_090G1_scaffold_87_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17002..17490
DNA (489bp) protein (163aa)
Uncharacterized protein n=8 Tax=Bifidobacterium RepID=V6XYY2_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEQ54528.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
L3_082_090G1_scaffold_87_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17442..17591)
DNA (150bp) protein (50aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5E9B8_BIFLI
Uncharacterized protein {ECO:0000313|EMBL:EEQ54527.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
hypothetical protein
L3_082_090G1_scaffold_87_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17887..23787
DNA (5901bp) protein (1967aa)
Endo-alpha-N-acetylgalactosaminidase, cell wall anchored n=1 Tax=Bifidobacterium longum E18 RepID=V6XU10_BIFLN
Endo-alpha-N-acetylgalactosaminidase, cell wall anchored {ECO:0000313|EMBL:ESV32790.1}; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
serine protease
L3_082_090G1_scaffold_87_15
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23886..24770)
DNA (885bp) protein (295aa)
Predicted membrane protein n=8 Tax=Bifidobacterium RepID=D6DAK0_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCY95231.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L3_082_090G1_scaffold_87_16
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24934..25047
DNA (114bp) protein (38aa)
Uncharacterized protein n=7 Tax=Bifidobacterium RepID=B3DU82_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCY95232.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L3_082_090G1_scaffold_87_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26153..27946
DNA (1794bp) protein (598aa)
Ftr1 n=1 Tax=Bifidobacterium longum subsp. longum (strain BBMN68) RepID=E4R0Q5_BIFLM
Iron permease {ECO:0000313|EMBL:KEY23576.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
ftr1; ftr1
L3_082_090G1_scaffold_87_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28120..28803
DNA (684bp) protein (228aa)
Fe2+ high-affinity transport protein n=16 Tax=Bifidobacterium RepID=B3DU80_BIFLD
hypothetical protein
Fe2+ high-affinity transport protein {ECO:0000313|EMBL:ACD98699.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L3_082_090G1_scaffold_87_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28953..30230
DNA (1278bp) protein (426aa)
Uncharacterized protein n=12 Tax=Bifidobacterium RepID=C2GSU3_BIFLN
hypothetical protein
Hypothetical membrane protein {ECO:0000313|EMBL:ACD98698.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L3_082_090G1_scaffold_87_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30252..31556
DNA (1305bp) protein (435aa)
SalY-type ABC antimicrobial peptide transport system permease component n=17 Tax=Bifidobacterium RepID=B3DU78_BIFLD
saly-type abc antimicrobial peptide transport system permease component
Possible permease protein of ABC transporter system {ECO:0000313|EMBL:AAN24288.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L3_082_090G1_scaffold_87_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31590..32813
DNA (1224bp) protein (408aa)
ABC-type transport system, involved in lipoprotein release, permease component n=8 Tax=Bifidobacterium RepID=D6DAJ4_BIFLN
saly-type abc antimicrobial peptide transport system permease component
Permease protein of ABC transporter system {ECO:0000313|EMBL:BAP82834.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
L3_082_090G1_scaffold_87_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32829..33626
DNA (798bp) protein (266aa)
ABC transporter ATP-binding protein n=1 Tax=Bifidobacterium longum subsp. longum KACC 91563 RepID=F8AU20_BIFLN
ABC transporter ATP-binding protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:AEI98287.1}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
L3_082_090G1_scaffold_87_23
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33742..34305
DNA (564bp) protein (188aa)
Uncharacterized protein n=11 Tax=Bifidobacterium RepID=B3DU75_BIFLD
FMN-binding domain.
Uncharacterized protein {ECO:0000313|EMBL:CCY95239.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L3_082_090G1_scaffold_87_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34311..34910)
DNA (600bp) protein (200aa)
AcrR-type transcriptional regulator n=11 Tax=Bifidobacterium RepID=B3DU74_BIFLD
AcrR family transcriptional regulator
AcrR-type transcriptional regulator {ECO:0000313|EMBL:BAP82837.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
L3_082_090G1_scaffold_87_25
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35025..37187)
DNA (2163bp) protein (721aa)
YhgE/Pip N-terminal domain/YhgE/Pip C-terminal domain n=12 Tax=Bacteria RepID=D6DAJ0_BIFLN
ABC-2 family transporter protein {ECO:0000313|EMBL:EIJ27057.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
hypothetical protein
L3_082_090G1_scaffold_87_26
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(37184..39814)
DNA (2631bp) protein (877aa)
Phage infection protein n=8 Tax=Bifidobacterium longum RepID=V6XWE9_BIFLN
ABC-2 family transporter protein {ECO:0000313|EMBL:EIJ27094.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
hypothetical protein
L3_082_090G1_scaffold_87_27
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

40168..41454
DNA (1287bp) protein (429aa)
Predicted membrane protein n=1 Tax=Bifidobacterium longum subsp. longum F8 RepID=D6DAI9_BIFLN
Predicted membrane protein
Predicted membrane protein {ECO:0000313|EMBL:CBK71192.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L3_082_090G1_scaffold_87_28
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

41633..43087
DNA (1455bp) protein (485aa)
6-phosphogluconate dehydrogenase, decarboxylating {ECO:0000256|PIRNR:PIRNR000109}; EC=1.1.1.44 {ECO:0000256|PIRNR:PIRNR000109};; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
6-phosphogluconate dehydrogenase, decarboxylating n=15 Tax=Bifidobacterium RepID=E8MGF7_BIFL2
6-phosphogluconate dehydrogenase
L3_082_090G1_scaffold_87_29
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(43327..44268)
DNA (942bp) protein (314aa)
6-phosphogluconolactonase n=11 Tax=Bifidobacterium RepID=E8MGF8_BIFL2
6-phosphogluconolactonase
Probable 6-phosphogluconolactonase {ECO:0000313|EMBL:AAN24279.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L3_082_090G1_scaffold_87_30
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(44464..45489)
DNA (1026bp) protein (342aa)
Glucose-6-phosphate dehydrogenase assembly protein OpcA n=12 Tax=Bacteria RepID=D6DAI6_BIFLN
Glucose-6-phosphate dehydrogenase assembly protein OpcA
OpcA protein {ECO:0000313|EMBL:KEY23563.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
Displaying items 1-30 of 133 in total

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