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L3_082_090G1_scaffold_103

Search features with annotation key words

Displaying items 1-30 of 77 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_082_090G1_scaffold_103_1
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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553..2802
DNA (2250bp) protein (750aa)
Outer membrane protein n=7 Tax=Bacteroidales RepID=D7IWD8_9BACE
TonB-linked outer membrane , SusC/RagA family protein {ECO:0000313|EMBL:KDS65461.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
hypothetical protein
L3_082_090G1_scaffold_103_2
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2823..4193
DNA (1371bp) protein (457aa)
SusD family protein n=5 Tax=Bacteroidales RepID=C7XA45_9PORP
hypothetical protein
Starch-binding associating with outer membrane family protein {ECO:0000313|EMBL:KDS65460.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_082_090G1_scaffold_103_3
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4271..5728)
DNA (1458bp) protein (486aa)
ABC transporter, ATP-binding protein n=1 Tax=Parabacteroides sp. D13 RepID=C7XA44_9PORP
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEU51121.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
molybdenum transport ATP-binding protein
L3_082_090G1_scaffold_103_4
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5880..7367)
DNA (1488bp) protein (496aa)
Uncharacterized protein n=6 Tax=Bacteroidales RepID=A6L9A3_PARD8
Susd and RagB outer membrane lipofamily protein {ECO:0000313|EMBL:KDS65459.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
hypothetical protein
L3_082_090G1_scaffold_103_5
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7393..10638)
DNA (3246bp) protein (1082aa)
Putative outer membrane protein, probably involved in nutrient binding n=1 Tax=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) RepID=A6L9A2_PARD8
hypothetical protein
Putative outer membrane protein, probably involved in nutrient binding {ECO:0000313|EMBL:ABR42266.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_082_090G1_scaffold_103_6
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11198..11866
DNA (669bp) protein (223aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=D0TAI5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEY84248.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
secreted glycosylhydrolase
L3_082_090G1_scaffold_103_7
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11918..12685)
DNA (768bp) protein (256aa)
Acetylglutamate kinase {ECO:0000256|HAMAP-Rule:MF_00082}; EC=2.7.2.8 {ECO:0000256|HAMAP-Rule:MF_00082};; N-acetyl-L-glutamate 5-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00082}; NAG kinase {ECO:0000256|HAMAP-Rule:MF_00082}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
Acetylglutamate kinase n=9 Tax=Bacteroidales RepID=ARGB_PARD8
acetylglutamate kinase
L3_082_090G1_scaffold_103_8
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13134..14387
DNA (1254bp) protein (418aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IWD1_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI07248.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
hypothetical protein
L3_082_090G1_scaffold_103_9
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14384..15970
DNA (1587bp) protein (529aa)
Alkaline phosphatase n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IWD0_9BACE
Alkaline phosphatase {ECO:0000313|EMBL:EFI07247.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
alkaline phosphatase
L3_082_090G1_scaffold_103_10
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16103..19483
DNA (3381bp) protein (1127aa)
Protein translocase subunit SecA n=8 Tax=Bacteroidales RepID=SECA_PARD8
secA; preprotein translocase subunit SecA
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
L3_082_090G1_scaffold_103_11
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19580..20674
DNA (1095bp) protein (365aa)
Alanine dehydrogenase {ECO:0000256|PIRNR:PIRNR000183}; EC=1.4.1.1 {ECO:0000256|PIRNR:PIRNR000183};; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
Alanine dehydrogenase n=1 Tax=Parabacteroides sp. D13 RepID=C7XA36_9PORP
alanine dehydrogenase
L3_082_090G1_scaffold_103_12
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20830..21573
DNA (744bp) protein (248aa)
Uncharacterized protein n=9 Tax=Bacteroidales RepID=A6L995_PARD8
hypothetical protein
TPR repeat family protein {ECO:0000313|EMBL:KDS67348.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_082_090G1_scaffold_103_13
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21665..22993)
DNA (1329bp) protein (443aa)
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
Membrane-associated zinc metalloprotease n=4 Tax=Bacteroidales RepID=A6L994_PARD8
membrane-associated zinc metalloprotease
L3_082_090G1_scaffold_103_14
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23024..24175)
DNA (1152bp) protein (384aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=3 Tax=Bacteroidales RepID=A6L993_PARD8
L3_082_090G1_scaffold_103_15
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24182..25045)
DNA (864bp) protein (288aa)
Peptidase, M23 family n=3 Tax=Bacteroidales RepID=C7XA32_9PORP
Peptidase, M23 family {ECO:0000313|EMBL:EEU51109.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
membrane peptidase
L3_082_090G1_scaffold_103_16
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25074..25595)
DNA (522bp) protein (174aa)
Ribosome maturation factor RimM n=4 Tax=Bacteroidales RepID=RIMM_PARD8
rimM; 16S rRNA-processing protein RimM
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00055369}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_082_090G1_scaffold_103_17
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25608..26912)
DNA (1305bp) protein (435aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=4 Tax=Bacteroidales RepID=A6L990_PARD8
L3_082_090G1_scaffold_103_18
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26909..27514)
DNA (606bp) protein (202aa)
Uncharacterized protein n=5 Tax=Bacteroidales RepID=A6L989_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEU51106.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_082_090G1_scaffold_103_19
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27581..28078)
DNA (498bp) protein (166aa)
Phosphinothricin N-acetyltransferase, putative n=2 Tax=Parabacteroides RepID=A6L988_PARD8
phosphinothricin N-acetyltransferase
Acetyltransferase family protein {ECO:0000313|EMBL:KDS67340.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_082_090G1_scaffold_103_20
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28174..29988)
DNA (1815bp) protein (605aa)
Glycosyl hydrolase, family 2 n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IWB9_9BACE
Glycosyl hydrolase, family 2 {ECO:0000313|EMBL:EFI07236.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
beta-glycosidase
L3_082_090G1_scaffold_103_21
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30383..30841
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D13 RepID=C7XA26_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEU51103.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
primosome, DnaD subunit
L3_082_090G1_scaffold_103_22
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31512..31946
DNA (435bp) protein (145aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A6L984_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEU51102.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_082_090G1_scaffold_103_23
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32148..32999
DNA (852bp) protein (284aa)
Uncharacterized protein n=9 Tax=Bacteroidales RepID=A6L983_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFK61425.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
L3_082_090G1_scaffold_103_24
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33050..33712
DNA (663bp) protein (221aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
Ribosomal RNA small subunit methyltransferase G n=3 Tax=Bacteroidales RepID=D7IWB3_9BACE
gidB; 16S rRNA methyltransferase GidB
L3_082_090G1_scaffold_103_25
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33709..34347
DNA (639bp) protein (213aa)
Metallo-beta-lactamase domain protein n=2 Tax=Parabacteroides RepID=E1YY72_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN27893.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
metallo-beta-lactamase
L3_082_090G1_scaffold_103_26
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34360..37212
DNA (2853bp) protein (951aa)
Glycine dehydrogenase (aminomethyl-transferring) {ECO:0000256|SAAS:SAAS00022796}; EC=1.4.4.2 {ECO:0000256|SAAS:SAAS00022796};; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
glycine dehydrogenase (EC:1.4.4.2)
Glycine dehydrogenase n=2 Tax=Parabacteroides RepID=C7XA21_9PORP
L3_082_090G1_scaffold_103_27
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37194..38318
DNA (1125bp) protein (375aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=K5ZJC7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN26997.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
hypothetical protein
L3_082_090G1_scaffold_103_28
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38430..39809
DNA (1380bp) protein (460aa)
Transporter, major facilitator family protein n=5 Tax=Parabacteroides RepID=C7XA19_9PORP
permease
Uncharacterized protein {ECO:0000313|EMBL:EKN26996.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
L3_082_090G1_scaffold_103_29
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

39993..40472
DNA (480bp) protein (160aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6ATS2_9PORP
transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:EKN26995.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
L3_082_090G1_scaffold_103_30
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

40627..41532
DNA (906bp) protein (302aa)
Electron transfer flavoprotein beta-subunit n=5 Tax=Bacteroidales RepID=A6L976_PARD8
electron transfer flavoprotein subunit beta
Electron transfer flavoprotein, beta subunit {ECO:0000313|EMBL:EFI07224.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
Displaying items 1-30 of 77 in total

View Taxonomy