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L3_082_090G1_scaffold_105

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Displaying items 1-30 of 92 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_082_090G1_scaffold_105_1
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

351..704
DNA (354bp) protein (118aa)
Transcriptional regulator, ArsR family n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0E9N0_9CLOT
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:EEG31795.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
putative transcriptional regulator
L3_082_090G1_scaffold_105_2
[Clostridium] hiranonis, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

701..1264
DNA (564bp) protein (188aa)
4Fe-4S binding domain protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6FZQ3_9FIRM
4Fe-4S binding domain protein {ECO:0000313|EMBL:EEA84997.1}; TaxID=500633 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] hiranonis DSM 13275.;"
4Fe-4S dicluster domain protein
L3_082_090G1_scaffold_105_3
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1357..1647)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B5Z1_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN76543.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
L3_082_090G1_scaffold_105_4
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1678..1944)
DNA (267bp) protein (89aa)
Transposase and inactivated derivatives n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L2I7_9FIRM
Transposase and inactivated derivatives
Integrase core domain protein {ECO:0000313|EMBL:EEG92607.1}; Flags: Fragment;; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
L3_082_090G1_scaffold_105_5
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2047..2232)
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8C8W3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23196.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L3_082_090G1_scaffold_105_6
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2229..2513)
DNA (285bp) protein (95aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R5U7D3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD18126.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
hypothetical protein
L3_082_090G1_scaffold_105_7
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2860..3153
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TMU7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67053.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L3_082_090G1_scaffold_105_8
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3153..3470
DNA (318bp) protein (106aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=V8BSG2_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49662.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L3_082_090G1_scaffold_105_9
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3498..4073
DNA (576bp) protein (192aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=V8BSG2_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:CCZ67055.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L3_082_090G1_scaffold_105_10
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4321..5523
DNA (1203bp) protein (401aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BTI6_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49661.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
ABC-type uncharacterized transport system, periplasmic component
L3_082_090G1_scaffold_105_11
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5549..6430
DNA (882bp) protein (294aa)
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B607_RUMGN
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:EDN76559.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
ABC-type uncharacterized transport system, permease component
L3_082_090G1_scaffold_105_12
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6423..7196
DNA (774bp) protein (258aa)
ABC transporter, ATP-binding protein n=2 Tax=Clostridiales RepID=A7B608_RUMGN
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CCZ67058.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
ABC-type uncharacterized transport system, ATPase component
L3_082_090G1_scaffold_105_13
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7272..7592)
DNA (321bp) protein (107aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7B609_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49657.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
ABC transporter permease protein
L3_082_090G1_scaffold_105_14
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7890..8381
DNA (492bp) protein (164aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BTI1_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49656.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Transcriptional regulators
L3_082_090G1_scaffold_105_15
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8374..10107
DNA (1734bp) protein (578aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BUG1_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD18116.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
ABC-type multidrug transport system, ATPase and permease components
L3_082_090G1_scaffold_105_16
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10100..11983
DNA (1884bp) protein (628aa)
ABC transporter, ATP-binding protein n=2 Tax=Clostridiales RepID=A7B613_RUMGN
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CCZ67063.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
ABC-type multidrug transport system, ATPase and permease components
L3_082_090G1_scaffold_105_17
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12099..12875
DNA (777bp) protein (259aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R5TUV8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD18114.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
ABC transporter
L3_082_090G1_scaffold_105_18
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12865..14913
DNA (2049bp) protein (683aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BSF2_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD18113.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
ABC transporter permease
L3_082_090G1_scaffold_105_19
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14923..15594
DNA (672bp) protein (224aa)
Response regulator receiver domain protein n=3 Tax=Lachnospiraceae RepID=A7B616_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49651.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
two-component response regulator
L3_082_090G1_scaffold_105_20
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15560..16618
DNA (1059bp) protein (353aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B617_RUMGN
periplasmic sensor signal transduction histidine kinase
L3_082_090G1_scaffold_105_21
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16962..17918
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TUW6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67074.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
conserved hypothetical protein (putative transposase or invertase)
L3_082_090G1_scaffold_105_22
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18307..18804)
DNA (498bp) protein (166aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7B627_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49648.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L3_082_090G1_scaffold_105_23
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18797..19720)
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5U7F2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67076.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L3_082_090G1_scaffold_105_24
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19802..20914)
DNA (1113bp) protein (371aa)
ABC transporter, ATP-binding protein n=4 Tax=Clostridiales RepID=A7B629_RUMGN
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDN76581.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
carbohydrate ABC transporter ATP-binding protein, CUT1 family (TC 3.A.1.1.-)
L3_082_090G1_scaffold_105_25
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21035..21286)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TMW2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67078.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
MerR family transcriptional regulator
L3_082_090G1_scaffold_105_26
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21300..22217)
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TUW9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67079.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L3_082_090G1_scaffold_105_27
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22441..22959
DNA (519bp) protein (173aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
Peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase n=4 Tax=Clostridiales RepID=A7B632_RUMGN
L3_082_090G1_scaffold_105_28
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23136..24062
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5U7F5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67081.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L3_082_090G1_scaffold_105_29
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24049..24894
DNA (846bp) protein (282aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01710};; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
ABC transporter, ATP-binding protein n=4 Tax=Clostridiales RepID=A7B635_RUMGN
ABC-type cobalt transport system, ATPase component
L3_082_090G1_scaffold_105_30
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24879..25751
DNA (873bp) protein (291aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01710};; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TMW5_9FIRM
ABC-type cobalt transport system, ATPase component
Displaying items 1-30 of 92 in total

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