ggKbase home page

L3_082_090G1_scaffold_106

Search features with annotation key words

Displaying items 1-30 of 85 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_082_090G1_scaffold_106_1
unknown

Not on your lists

comp(2..64)
DNA (63bp) protein (21aa)

This feature has no annotations

L3_082_090G1_scaffold_106_2
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(187..1419)
DNA (1233bp) protein (411aa)
CinA-like protein n=3 Tax=Bacteroides RepID=A5ZCE4_9BACE
CinA-like protein {ECO:0000256|HAMAP-Rule:MF_00226}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
competence/damage-inducible protein cinA
L3_082_090G1_scaffold_106_3
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(1496..2518)
DNA (1023bp) protein (341aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00195365}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-threonylcarbamoyladenine synthase {ECO:0000256|HAMAP-Rule:MF_01445}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZCE3_9BACE
DNA-binding/iron metalloprotein/AP endonuclease
L3_082_090G1_scaffold_106_4
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2720..7165
DNA (4446bp) protein (1482aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZCE2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM22161.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Family of unknown function (DUF490).
L3_082_090G1_scaffold_106_5
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7320..7754)
DNA (435bp) protein (145aa)
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=A5ZCE1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM22160.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Protein of unknown function (DUF2874).
L3_082_090G1_scaffold_106_6
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7777..8214)
DNA (438bp) protein (146aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZCE0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM22159.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Protein of unknown function (DUF2874).
L3_082_090G1_scaffold_106_7
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8535..9686
DNA (1152bp) protein (384aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZCD9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM22158.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L3_082_090G1_scaffold_106_8
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9690..10433
DNA (744bp) protein (248aa)
ABC transporter, ATP-binding protein n=3 Tax=Bacteroides RepID=A5ZCD8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ74052.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
ABC-type multidrug transport system, ATPase component
L3_082_090G1_scaffold_106_9
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10405..11382
DNA (978bp) protein (326aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I9PUX1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ74051.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
ABC-type transport system involved in multi-copper enzyme maturation, permease component
L3_082_090G1_scaffold_106_10
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11507..12778)
DNA (1272bp) protein (424aa)
Histidine kinase A domain protein n=3 Tax=Bacteroides RepID=A5ZCD6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ74050.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Signal transduction histidine kinase
L3_082_090G1_scaffold_106_11
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12788..13477)
DNA (690bp) protein (230aa)
Response regulator receiver domain protein n=2 Tax=Bacteroides RepID=A5ZCD5_9BACE
Response regulator receiver domain protein {ECO:0000313|EMBL:EDM22154.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
two-component system response regulator
L3_082_090G1_scaffold_106_12
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(13653..15146)
DNA (1494bp) protein (498aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01571}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01571};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01571}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
prolyl-tRNA synthetase (EC:6.1.1.15)
Proline--tRNA ligase n=3 Tax=Bacteroides RepID=A5ZCD4_9BACE
L3_082_090G1_scaffold_106_13
unknown

Not on your lists

comp(15430..15603)
DNA (174bp) protein (58aa)

This feature has no annotations

L3_082_090G1_scaffold_106_14
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15643..17055
DNA (1413bp) protein (471aa)
Outer membrane efflux protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZCD3_9BACE
Outer membrane efflux protein {ECO:0000313|EMBL:EDM22152.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L3_082_090G1_scaffold_106_15
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17062..18048
DNA (987bp) protein (329aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZCD2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM22151.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L3_082_090G1_scaffold_106_16
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18056..19240
DNA (1185bp) protein (395aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I8V5G1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY20487.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
transmembrane protein
L3_082_090G1_scaffold_106_17
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19224..20408
DNA (1185bp) protein (395aa)
ABC-2 type transporter n=3 Tax=Bacteroides RepID=A5ZCD0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73271.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L3_082_090G1_scaffold_106_18
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20562..24554
DNA (3993bp) protein (1331aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZCC9_9BACE
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:EDM22148.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
two-component system sensor histidine kinase/response regulator
L3_082_090G1_scaffold_106_19
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24616..25128)
DNA (513bp) protein (171aa)
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=A5ZCC8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY20490.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_082_090G1_scaffold_106_20
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25141..27030)
DNA (1890bp) protein (630aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5UCC8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73274.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
TonB-dependent outer membrane receptor
L3_082_090G1_scaffold_106_21
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27047..27466)
DNA (420bp) protein (140aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=A5ZCC6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM22145.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L3_082_090G1_scaffold_106_22
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27466..28869)
DNA (1404bp) protein (468aa)
4Fe-4S binding domain protein n=3 Tax=Bacteroides RepID=A5ZCC5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY20493.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Predicted oxidoreductases of the aldo/keto reductase family
L3_082_090G1_scaffold_106_23
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28889..30403)
DNA (1515bp) protein (505aa)
4Fe-4S binding domain protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5UX12_9BACE
4Fe-4S binding domain protein {ECO:0000313|EMBL:CCZ73277.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
4Fe-4S binding domain.
L3_082_090G1_scaffold_106_24
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30726..31901
DNA (1176bp) protein (392aa)
L-fucose:H+ symporter permease n=2 Tax=Bacteroides caccae RepID=A5ZCC3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY20495.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
major facilitator transporter
L3_082_090G1_scaffold_106_25
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31902..32150)
DNA (249bp) protein (83aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZCC2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM22141.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Protein of unknown function (DUF3098).
L3_082_090G1_scaffold_106_26
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32165..35299)
DNA (3135bp) protein (1045aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8V5H1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY20497.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_082_090G1_scaffold_106_27
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35441..36529)
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZCC0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM22139.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L3_082_090G1_scaffold_106_28
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36774..37394
DNA (621bp) protein (207aa)
HAD hydrolase, family IA, variant 3 n=4 Tax=root RepID=A5ZCB9_9BACE
HAD hydrolase, family IA {ECO:0000313|EMBL:EIY20499.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
L3_082_090G1_scaffold_106_29
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37427..38236
DNA (810bp) protein (270aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I8V216_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY20500.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Short-chain alcohol dehydrogenase of unknown specificity
L3_082_090G1_scaffold_106_30
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38326..39054)
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9PUZ0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY20501.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
Displaying items 1-30 of 85 in total

View Taxonomy