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L3_082_090G1_scaffold_142

Search features with annotation key words

Displaying items 1-30 of 74 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_082_090G1_scaffold_142_1
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

192..851
DNA (660bp) protein (220aa)
Topoisomerase DNA-binding C4 zinc finger domain protein n=3 Tax=Lachnospiraceae RepID=A7B5W2_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD17594.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
exonuclease, DNA polymerase III, epsilon subunit family
L3_082_090G1_scaffold_142_2
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(906..2021)
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B5W1_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN76698.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
L3_082_090G1_scaffold_142_3
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2011..2565)
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5U974_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67731.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
RNA polymerase sigma-70 factor
L3_082_090G1_scaffold_142_4
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2710..2991)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TPY5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67730.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L3_082_090G1_scaffold_142_5
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3098..3340)
DNA (243bp) protein (81aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7B5V7_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD17598.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
hypothetical protein
L3_082_090G1_scaffold_142_6
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3800..4444
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TPL6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67728.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L3_082_090G1_scaffold_142_7
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4527..5108
DNA (582bp) protein (194aa)
Xanthine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01184, ECO:0000256|SAAS:SAAS00064502}; Short=XPRTase {ECO:0000256|HAMAP-Rule:MF_01184};; EC=2.4.2.22 {ECO:0000256|HAMAP-Rule:MF_01184, ECO:0000256|SAAS:SAAS00064502};; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
xanthine phosphoribosyltransferase (EC:2.4.2.22)
Xanthine phosphoribosyltransferase n=4 Tax=Clostridiales RepID=A7B5V4_RUMGN
L3_082_090G1_scaffold_142_8
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5071..5814
DNA (744bp) protein (248aa)
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED (EC:5.4.2.6)
HAD hydrolase, family IA, variant 3 n=4 Tax=Clostridiales RepID=A7B5V3_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD17601.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L3_082_090G1_scaffold_142_9
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5905..6414
DNA (510bp) protein (170aa)
SNARE-like domain protein n=4 Tax=Clostridiales RepID=A7B5V2_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD17602.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
DedA family protein
L3_082_090G1_scaffold_142_10
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6431..7714
DNA (1284bp) protein (428aa)
Glycosyltransferase, group 1 family protein {ECO:0000313|EMBL:EDN76688.1}; EC=2.4.-.- {ECO:0000313|EMBL:EDN76688.1};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Glycosyltransferase, group 1 family protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B5V1_RUMGN
group 1 glycosyl transferase
L3_082_090G1_scaffold_142_11
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7662..8276
DNA (615bp) protein (205aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7B5V0_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN44569.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L3_082_090G1_scaffold_142_12
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8313..9011
DNA (699bp) protein (233aa)
Response regulator receiver domain protein n=4 Tax=Clostridiales RepID=A7B5U9_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:CCZ67722.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_082_090G1_scaffold_142_13
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8983..11169
DNA (2187bp) protein (729aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BT02_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN44567.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
sensor histidine kinase
L3_082_090G1_scaffold_142_14
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11144..12094
DNA (951bp) protein (317aa)
CAAX amino terminal protease family protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TPX2_9FIRM
CAAX amino terminal protease family protein {ECO:0000313|EMBL:CCZ67720.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
ABC transporter permease
L3_082_090G1_scaffold_142_15
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12172..12852
DNA (681bp) protein (227aa)
TIGR00266 family protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TWM7_9FIRM
TIGR00266 family protein {ECO:0000313|EMBL:CCZ67719.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
conserved hypothetical protein TIGR00266
L3_082_090G1_scaffold_142_16
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12862..13206
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TPK6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67718.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L3_082_090G1_scaffold_142_17
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13293..14486)
DNA (1194bp) protein (398aa)
Hydrogenase maturation GTPase HydF n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UFU7_9FIRM
Hydrogenase maturation GTPase HydF {ECO:0000313|EMBL:CCZ67717.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L3_082_090G1_scaffold_142_18
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14504..15925)
DNA (1422bp) protein (474aa)
Iron-only hydrogenase maturation rSAM protein HydG n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5U961_9FIRM
Iron-only hydrogenase maturation rSAM protein HydG {ECO:0000313|EMBL:CCZ67716.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
iron-only hydrogenase maturation protein HydG
L3_082_090G1_scaffold_142_19
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15965..17023)
DNA (1059bp) protein (353aa)
iron-only hydrogenase maturation protein HydE (EC:2.8.1.6)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TPW8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67715.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L3_082_090G1_scaffold_142_20
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17096..17443
DNA (348bp) protein (116aa)
Acylphosphatase {ECO:0000256|RuleBase:RU000553}; EC=3.6.1.7 {ECO:0000256|RuleBase:RU000553};; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Acylphosphatases (EC:3.6.1.7)
Acylphosphatase n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TWM4_9FIRM
L3_082_090G1_scaffold_142_21
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17493..18284
DNA (792bp) protein (264aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
pyrroline-5-carboxylate reductase (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TPK2_9FIRM
L3_082_090G1_scaffold_142_22
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18317..19009
DNA (693bp) protein (231aa)
nrdG; ribonucleoside-triphosphate reductase-like protein (EC:1.17.4.2)
Anaerobic ribonucleoside-triphosphate reductase activating protein n=3 Tax=Lachnospiraceae RepID=A7B590_RUMGN
Anaerobic ribonucleoside-triphosphate reductase activating protein {ECO:0000313|EMBL:ETD17619.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L3_082_090G1_scaffold_142_23
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19296..20621
DNA (1326bp) protein (442aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium CAG:215 RepID=R6EQ15_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA99289.1}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
extracellular solute-binding protein
L3_082_090G1_scaffold_142_24
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20708..21643
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium CAG:215 RepID=R6EFD0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA99288.1}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
binding-protein-dependent transport system inner membrane protein
L3_082_090G1_scaffold_142_25
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21657..22496
DNA (840bp) protein (280aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Lachnospiraceae bacterium CAG:215 RepID=R6FB40_9FIRM
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:CDA99287.1}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
binding-protein-dependent transport systems inner membrane component
L3_082_090G1_scaffold_142_26
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22531..23466
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KCV9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN38852.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
oxidoreductase domain-containing protein
L3_082_090G1_scaffold_142_27
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23512..25929
DNA (2418bp) protein (806aa)
Beta-glucosidase-related glycosidases (EC:3.2.1.21)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XTL3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY98951.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
L3_082_090G1_scaffold_142_28
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25972..27540
DNA (1569bp) protein (523aa)
Xylosidase/arabinosidase n=1 Tax=Lachnospiraceae bacterium CAG:215 RepID=R6ER27_9FIRM
Xylosidase/arabinosidase {ECO:0000313|EMBL:CDA99286.1}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
arfA; ArfA
L3_082_090G1_scaffold_142_29
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27575..29911
DNA (2337bp) protein (779aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium CAG:215 RepID=R6EHB1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA99285.1}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
hypothetical protein
L3_082_090G1_scaffold_142_30
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29912..31669)
DNA (1758bp) protein (586aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium CAG:215 RepID=R6EQ11_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA99284.1}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
signal transduction histidine kinase, LytS
Displaying items 1-30 of 74 in total

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