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L3_082_090G1_scaffold_144

Search features with annotation key words

Displaying items 1-30 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_082_090G1_scaffold_144_1
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..581)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5H0U3_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJE06569.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_082_090G1_scaffold_144_2
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

625..1479
DNA (855bp) protein (285aa)
Transcriptional regulatory protein, C-terminal domain protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A749_BIFAD
transcriptional regulator
Transcriptional regulatory protein, C-terminal domain protein {ECO:0000313|EMBL:EDN82632.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
L3_082_090G1_scaffold_144_3
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1646..2311
DNA (666bp) protein (222aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
Endonuclease III n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A751_BIFAD
nth; endonuclease III
L3_082_090G1_scaffold_144_4
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2401..3948
DNA (1548bp) protein (516aa)
ABC transporter, substrate-binding protein, family 5 n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A752_BIFAD
ABC transporter, substrate-binding protein, family 5 {ECO:0000313|EMBL:EDN82635.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
ABC transporter substrate-binding protein
L3_082_090G1_scaffold_144_5
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


4063..6792
DNA (2730bp) protein (910aa)
Valine--tRNA ligase {ECO:0000256|SAAS:SAAS00105779}; EC=6.1.1.9 {ECO:0000256|SAAS:SAAS00105779};; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
valS; valyl-tRNA synthetase (EC:6.1.1.9)
Valine--tRNA ligase n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5H0B6_9BIFI
L3_082_090G1_scaffold_144_6
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7272..9203)
DNA (1932bp) protein (644aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5H0T7_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIM01607.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_082_090G1_scaffold_144_7
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9313..9726)
DNA (414bp) protein (138aa)
Chorismate mutase {ECO:0000313|EMBL:EDN82638.1}; EC=5.4.99.5 {ECO:0000313|EMBL:EDN82638.1};; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
Chorismate mutase n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A755_BIFAD
chorismate mutase
L3_082_090G1_scaffold_144_8
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9775..10251)
DNA (477bp) protein (159aa)
AsnC-type transcriptional regulator n=3 Tax=Bifidobacterium RepID=A1A3F1_BIFAA
AsnC-type transcriptional regulator
AsnC-type transcriptional regulator {ECO:0000313|EMBL:AJE06578.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_082_090G1_scaffold_144_9
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10623..12635)
DNA (2013bp) protein (671aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
Transcription termination factor Rho n=2 Tax=Bifidobacterium adolescentis RepID=A1A3F2_BIFAA
rho; transcription termination factor Rho
L3_082_090G1_scaffold_144_10
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12969..14558)
DNA (1590bp) protein (530aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A761_BIFAD
FAD dependent oxidoreductase
Flavin containing amine oxidoreductase {ECO:0000313|EMBL:KFI94991.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
L3_082_090G1_scaffold_144_11
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14731..15042)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GLF6_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCY18265.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
L3_082_090G1_scaffold_144_12
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15039..16109)
DNA (1071bp) protein (357aa)
Possible acetyltransferase n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A3F4_BIFAA
putative acetyltransferase
Acetyltransferase {ECO:0000313|EMBL:KFI94989.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
L3_082_090G1_scaffold_144_13
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16380..17861)
DNA (1482bp) protein (494aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121, ECO:0000256|SAAS:SAAS00222465}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00121};; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=2 Tax=Bifidobacterium RepID=A1A3F5_BIFAA
aspartyl/glutamyl-tRNA amidotransferase subunit B
L3_082_090G1_scaffold_144_14
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17902..19437)
DNA (1536bp) protein (512aa)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120};; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
Glutamyl-tRNA(Gln) amidotransferase subunit A n=3 Tax=root RepID=A7A767_BIFAD
aspartyl/glutamyl-tRNA amidotransferase subunit A
L3_082_090G1_scaffold_144_15
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19439..19735)
DNA (297bp) protein (99aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00122};; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=3 Tax=root RepID=GATC_BIFAA
gatC; aspartyl/glutamyl-tRNA amidotransferase subunit C
L3_082_090G1_scaffold_144_16
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19919..20833)
DNA (915bp) protein (305aa)
RNA methyltransferase, TrmH family n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A770_BIFAD
RNA methyltransferase, TrmH family {ECO:0000313|EMBL:EDN82653.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
hypothetical protein
L3_082_090G1_scaffold_144_17
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20920..21591)
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A3F9_BIFAA
orotate phosphoribosyltransferase
Orotate phosphoribosyltransferase {ECO:0000313|EMBL:AII76961.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_082_090G1_scaffold_144_18
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21661..22995)
DNA (1335bp) protein (445aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A3G0_BIFAA
Putative DNA recombination protein RmuC {ECO:0000313|EMBL:KFI94983.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
hypothetical protein
L3_082_090G1_scaffold_144_19
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23139..24074
DNA (936bp) protein (312aa)
Copper-transporting ATPase n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A3G1_BIFAA
silP; copper-transporting ATPase
Copper-transporting ATPase {ECO:0000313|EMBL:CCY19767.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
L3_082_090G1_scaffold_144_20
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24078..26795)
DNA (2718bp) protein (906aa)
ATP-dependent chaperone protein ClpB n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A774_BIFAD
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
chaperone clpB
L3_082_090G1_scaffold_144_21
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27098..27919)
DNA (822bp) protein (274aa)
Possible 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase in the fumarylacetoacetate hydrolase family n=2 Tax=Bifidobacterium adolescentis RepID=A1A3G3_BIFAA
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase {ECO:0000313|EMBL:KIM01621.1}; Putative 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase in the fumarylacetoacetate hydrolase family {ECO:0000313|EMBL:AJE06592.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_082_090G1_scaffold_144_22
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28014..28634)
DNA (621bp) protein (207aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=A1A3G4_BIFAA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCY19770.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
L3_082_090G1_scaffold_144_23
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28794..29813)
DNA (1020bp) protein (340aa)
Truncated clumping factor n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A3G7_BIFAA
Clumping factor {ECO:0000313|EMBL:KFI94978.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
clfA; truncated clumping factor
L3_082_090G1_scaffold_144_24
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29940..31229)
DNA (1290bp) protein (430aa)
Possible sortase-like protein n=2 Tax=root RepID=R5GRA4_9BIFI
sortase-like protein
Sortase-like protein {ECO:0000313|EMBL:AII76953.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_082_090G1_scaffold_144_25
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31505..32323)
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A3G9_BIFAA
hypothetical protein
Alanine racemase domain-containing protein {ECO:0000313|EMBL:KFI94976.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
L3_082_090G1_scaffold_144_26
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32612..33031)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A785_BIFAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AII76951.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_082_090G1_scaffold_144_27
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33439..34560
DNA (1122bp) protein (374aa)
Glutamyl-Q tRNA(Asp) synthetase {ECO:0000313|EMBL:KFI94974.1}; EC=6.1.1.17 {ECO:0000313|EMBL:KFI94974.1};; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
Glutamyl-Q tRNA(Asp) synthetase n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A3H1_BIFAA
glutamyl-Q tRNA(Asp) synthetase
L3_082_090G1_scaffold_144_28
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34656..35558)
DNA (903bp) protein (301aa)
Membrane protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GVE9_9BIFI
membrane protein
Membrane protein {ECO:0000313|EMBL:AII76949.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_082_090G1_scaffold_144_29
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35734..36465)
DNA (732bp) protein (244aa)
Glycerol uptake facilitator-like protein in Mip family n=3 Tax=Bifidobacterium RepID=A1A3H3_BIFAA
glpF; glycerol uptake facilitator protein
Glycerol uptake facilitator protein {ECO:0000313|EMBL:KFI94972.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
L3_082_090G1_scaffold_144_30
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36949..40197
DNA (3249bp) protein (1083aa)
Uncharacterized protein n=2 Tax=root RepID=A7A791_BIFAD
Uncharacterized protein {ECO:0000313|EMBL:EDN82674.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
hypothetical protein
Displaying items 1-30 of 59 in total

View Taxonomy