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L3_082_090G1_scaffold_154

Search features with annotation key words

Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_082_090G1_scaffold_154_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

363..1118
DNA (756bp) protein (252aa)
NAD-dependent protein deacetylase n=13 Tax=Bifidobacterium RepID=B3DP85_BIFLD
nad-dependent protein deacetylase
Transcriptional regulator {ECO:0000313|EMBL:AEI98541.1}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
L3_082_090G1_scaffold_154_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1264..2529)
DNA (1266bp) protein (422aa)
Threonine dehydratase {ECO:0000313|EMBL:KEY33228.1}; EC=4.3.1.19 {ECO:0000313|EMBL:KEY33228.1};; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
Threonine dehydratase n=14 Tax=Bifidobacterium RepID=B3DP84_BIFLD
ilvA; ilva
L3_082_090G1_scaffold_154_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2777..4597)
DNA (1821bp) protein (607aa)
Oligo-1,6-glucosidase {ECO:0000313|EMBL:EIJ23265.1}; EC=3.2.1.10 {ECO:0000313|EMBL:EIJ23265.1};; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
Alpha amylase, catalytic region n=8 Tax=Bifidobacterium longum RepID=D6ZWZ9_BIFLJ
alpha amylase catalytic subunit
L3_082_090G1_scaffold_154_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4721..6583)
DNA (1863bp) protein (621aa)
Alpha-galactosidase n=9 Tax=Bifidobacterium longum RepID=D6DB51_BIFLN
Raffinose synthase or seed inhibition protein Sip1 domain protein {ECO:0000313|EMBL:EIJ23252.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
raffinose synthase
L3_082_090G1_scaffold_154_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6615..8285)
DNA (1671bp) protein (557aa)
Glycosidase n=9 Tax=Bifidobacterium longum RepID=B3DP81_BIFLD
Glycosyl hydrolase {ECO:0000313|EMBL:BAJ67537.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
glycosyl hydrolase
L3_082_090G1_scaffold_154_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8386..9210)
DNA (825bp) protein (275aa)
MalG-type ABC sugar transport system permease component n=12 Tax=Bifidobacterium RepID=B3DP80_BIFLD
Permease protein of ABC transporter system for sugars
Putative ABC transporter permease component {ECO:0000313|EMBL:BAJ67538.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L3_082_090G1_scaffold_154_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9213..10253)
DNA (1041bp) protein (347aa)
Permease protein of ABC transporter system for sugars n=11 Tax=Bifidobacterium RepID=F9XZU1_BIFBU
Permease protein of ABC transporter system for sugars
Permease protein of ABC transporter system for sugars {ECO:0000313|EMBL:BAP84486.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
L3_082_090G1_scaffold_154_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10257..11582)
DNA (1326bp) protein (442aa)
MalE-type ABC sugar transport system periplasmic component n=9 Tax=Bifidobacterium longum RepID=B3DP78_BIFLD
ABC transporter substrate-binding protein
Putative ABC transporter substrate binding component {ECO:0000313|EMBL:BAJ67540.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L3_082_090G1_scaffold_154_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11681..11836
DNA (156bp) protein (52aa)
Uncharacterized protein n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3ATA6_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:EIJ23263.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L3_082_090G1_scaffold_154_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11829..12947)
DNA (1119bp) protein (373aa)
Uncharacterized protein n=10 Tax=Bifidobacterium RepID=V6Y0Y7_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESV34446.1}; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
L3_082_090G1_scaffold_154_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13009..14337)
DNA (1329bp) protein (443aa)
ABC transporter, solute-binding protein n=4 Tax=root RepID=C2GWQ6_BIFLN
ABC transporter substrate-binding protein
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:KEY24107.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L3_082_090G1_scaffold_154_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14545..15573
DNA (1029bp) protein (343aa)
Transcriptional regulator n=5 Tax=Bifidobacterium longum RepID=F8APT0_BIFLN
transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:BAJ67543.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L3_082_090G1_scaffold_154_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15691..16710
DNA (1020bp) protein (340aa)
LacI-type response repressor n=2 Tax=Bifidobacterium longum RepID=B3DP74_BIFLD
LacI family response repressor
LacI family transcriptional regulator {ECO:0000313|EMBL:KEY24105.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L3_082_090G1_scaffold_154_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16769..17635)
DNA (867bp) protein (289aa)
MalG-type ABC sugar transport system permease component n=18 Tax=Bifidobacterium RepID=B3DP73_BIFLD
sugar ABC transporter permease
MalG-type ABC sugar transport system permease component {ECO:0000313|EMBL:ACD98932.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L3_082_090G1_scaffold_154_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17654..18583)
DNA (930bp) protein (310aa)
Sugar ABC transporter permease component n=8 Tax=Bifidobacterium RepID=E8MFR9_BIFL2
sugar ABC transporter permease
Sugar ABC transporter permease {ECO:0000313|EMBL:AIW43053.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L3_082_090G1_scaffold_154_16
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18605..19894)
DNA (1290bp) protein (430aa)
Sugar ABC transporter substrate binding component n=9 Tax=Bacteria RepID=E8MFS0_BIFL2
sugar ABC transporter substrate-binding protein
Sugar ABC transporter substrate binding component {ECO:0000313|EMBL:CCY96280.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L3_082_090G1_scaffold_154_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20068..21276
DNA (1209bp) protein (403aa)
ROK family protein n=8 Tax=Bacteria RepID=V6XZ41_BIFLN
NagC family transcriptional regulator {ECO:0000313|EMBL:KHD95522.1}; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
NagC/XylR-type transcriptional regulator
L3_082_090G1_scaffold_154_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21441..23747)
DNA (2307bp) protein (769aa)
GalA1 n=1 Tax=Bifidobacterium longum subsp. longum (strain BBMN68) RepID=E4R1T1_BIFLM
galA1; gala1
Alpha-galactosidase {ECO:0000313|EMBL:AAN25312.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L3_082_090G1_scaffold_154_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23867..24391)
DNA (525bp) protein (175aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
CMP/dCMP deaminase, zinc-binding protein n=10 Tax=Bifidobacterium RepID=D6ZX14_BIFLJ
CMP/dCMP deaminase
L3_082_090G1_scaffold_154_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24442..26514
DNA (2073bp) protein (691aa)
Na+/H+ antiporter n=1 Tax=Bifidobacterium sp. 12_1_47BFAA RepID=E5XXM9_9BIFI
Sodium:proton antiporter {ECO:0000313|EMBL:KEY24098.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
Na+/H+ antiporter
L3_082_090G1_scaffold_154_21
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26708..27466)
DNA (759bp) protein (253aa)
Phospholipase/Carboxylesterase n=3 Tax=Bifidobacterium RepID=D6ZX16_BIFLJ
phospholipase/carboxylesterase
Phospholipase/Carboxylesterase {ECO:0000313|EMBL:EFV37602.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
L3_082_090G1_scaffold_154_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27585..28445)
DNA (861bp) protein (287aa)
Uncharacterized protein n=7 Tax=Bifidobacterium RepID=C5E9R8_BIFLI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIJ32431.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
L3_082_090G1_scaffold_154_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28802..29383
DNA (582bp) protein (194aa)
Deoxycytidine triphosphate deaminase {ECO:0000256|HAMAP-Rule:MF_00146}; Short=dCTP deaminase {ECO:0000256|HAMAP-Rule:MF_00146};; EC=3.5.4.13 {ECO:0000256|HAMAP-Rule:MF_00146, ECO:0000313|EMBL:CBK71390.1};; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
Deoxycytidine triphosphate deaminase n=18 Tax=Bifidobacterium RepID=DCD_BIFLD
deoxycytidine triphosphate deaminase
L3_082_090G1_scaffold_154_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29446..31176
DNA (1731bp) protein (577aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain 157F) RepID=E8MWD7_BIFL1
Uncharacterized protein {ECO:0000313|EMBL:BAP84504.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
hypothetical protein
L3_082_090G1_scaffold_154_25
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31413..34400)
DNA (2988bp) protein (996aa)
Calcium-transporting ATPase n=2 Tax=Bifidobacterium longum RepID=V6Y0Z9_BIFLN
Calcium-transporting ATPase {ECO:0000313|EMBL:ESV34461.1}; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
mglA4; cation transport ATPase
L3_082_090G1_scaffold_154_26
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34583..35413)
DNA (831bp) protein (277aa)
Esterase/lipase n=8 Tax=Bifidobacterium RepID=B3DP61_BIFLD
xylan esterase
Esterase/lipase {ECO:0000313|EMBL:EFV37607.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
L3_082_090G1_scaffold_154_27
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35492..36790)
DNA (1299bp) protein (433aa)
Transporter n=8 Tax=Bifidobacterium longum RepID=V6XZ49_BIFLN
permease
Permease {ECO:0000313|EMBL:AIW43064.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L3_082_090G1_scaffold_154_28
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36878..37870
DNA (993bp) protein (331aa)
rRNA methylase n=17 Tax=Bifidobacterium RepID=B3DP59_BIFLD
RNA methyltransferase
RNA methyltransferase {ECO:0000313|EMBL:KEY24089.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L3_082_090G1_scaffold_154_29
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(37977..39374)
DNA (1398bp) protein (466aa)
Lipopolysaccharide kinase n=1 Tax=Bifidobacterium sp. 12_1_47BFAA RepID=E5XXN8_9BIFI
Lipopolysaccharide kinase {ECO:0000313|EMBL:EFV37610.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
lipopolysaccharide kinase
L3_082_090G1_scaffold_154_30
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(39611..40738)
DNA (1128bp) protein (376aa)
ABC transporter ATP-binding component n=3 Tax=Bifidobacterium longum RepID=E8MFT9_BIFL2
ABC transporter ATP-binding protein
ABC transporter ATP-binding component {ECO:0000313|EMBL:BAJ67566.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
Displaying items 1-30 of 54 in total

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