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L3_082_090G1_scaffold_178

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Displaying items 1-30 of 74 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_082_090G1_scaffold_178_1
Eubacterium sp. CAG:86, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

185..424
DNA (240bp) protein (80aa)
DNA-binding helix-turn-helix protein n=1 Tax=Eubacterium sp. CAG:86 RepID=R5DXN2_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CCX84953.1}; TaxID=1262895 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:86.;"
hypothetical protein
L3_082_090G1_scaffold_178_2
Eubacterium sp. CAG:86, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

429..1043
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:86 RepID=R5E868_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX84952.1}; TaxID=1262895 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:86.;"
hypothetical protein
L3_082_090G1_scaffold_178_3
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(1447..2466)
DNA (1020bp) protein (340aa)
Biotin synthase {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00009987}; EC=2.8.1.6 {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00250466};; TaxID=1263101 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens CAG:287.;"
biotin synthase (EC:2.8.1.6)
Biotin synthase n=1 Tax=Phascolarctobacterium succinatutens CAG:287 RepID=R6Y2A8_9FIRM
L3_082_090G1_scaffold_178_4
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(2720..3148)
DNA (429bp) protein (143aa)
VanZ-like protein n=1 Tax=Phascolarctobacterium succinatutens YIT 12067 RepID=E8LBF4_9FIRM
VanZ-like protein {ECO:0000313|EMBL:EFY05840.1}; TaxID=626939 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens YIT 12067.;"
Predicted integral membrane protein
L3_082_090G1_scaffold_178_5
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(3185..4015)
DNA (831bp) protein (277aa)
Methylenetetrahydrofolate dehydrogenase (NADP(+)) (EC:1.5.1.5)
Bifunctional protein FolD n=1 Tax=Phascolarctobacterium succinatutens CAG:287 RepID=R6WT80_9FIRM
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=1263101 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens CAG:287.;"
L3_082_090G1_scaffold_178_6
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(4100..5770)
DNA (1671bp) protein (557aa)
Formate--tetrahydrofolate ligase {ECO:0000256|HAMAP-Rule:MF_01543}; EC=6.3.4.3 {ECO:0000256|HAMAP-Rule:MF_01543};; Formyltetrahydrofolate synthetase {ECO:0000256|HAMAP-Rule:MF_01543}; TaxID=626939 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens YIT 12067.;"
fhs1; formyl-tetrahydrofolate synthetase Fhs (EC:6.3.4.3)
Formate--tetrahydrofolate ligase n=1 Tax=Phascolarctobacterium succinatutens YIT 12067 RepID=E8LBF6_9FIRM
L3_082_090G1_scaffold_178_7
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(5887..7920)
DNA (2034bp) protein (678aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Penicillin-binding protein, transpeptidase domain protein n=1 Tax=Phascolarctobacterium succinatutens YIT 12067 RepID=E8LBF7_9FIRM
Penicillin-binding protein, transpeptidase domain protein {ECO:0000313|EMBL:EFY05843.1}; TaxID=626939 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens YIT 12067.;"
L3_082_090G1_scaffold_178_8
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(7917..9095)
DNA (1179bp) protein (393aa)
Cell cycle protein, FtsW/RodA/SpoVE family n=1 Tax=Phascolarctobacterium succinatutens YIT 12067 RepID=E8LBF8_9FIRM
Cell cycle protein, FtsW/RodA/SpoVE family {ECO:0000313|EMBL:EFY05844.1}; TaxID=626939 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens YIT 12067.;"
cell cycle protein
L3_082_090G1_scaffold_178_9
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(9109..9747)
DNA (639bp) protein (213aa)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; tRNA(m7G46)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; TaxID=626939 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens YIT 12067.;"
tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Phascolarctobacterium succinatutens YIT 12067 RepID=E8LBF9_9FIRM
tRNA (guanine-N(7)-)-methyltransferase
L3_082_090G1_scaffold_178_10
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(9872..10432)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium succinatutens YIT 12067 RepID=E8LBG0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFY05846.1}; TaxID=626939 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens YIT 12067.;"
hypothetical protein
L3_082_090G1_scaffold_178_11
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

10646..11602
DNA (957bp) protein (319aa)
Glutamyl-Q tRNA(Asp) synthetase {ECO:0000256|HAMAP-Rule:MF_01428, ECO:0000256|SAAS:SAAS00018238}; Short=Glu-Q-RSs {ECO:0000256|HAMAP-Rule:MF_01428};; EC=6.1.1.- {ECO:0000256|HAMAP-Rule:MF_01428, ECO:0000256|SAAS:SAAS00018222};; TaxID=626939 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens YIT 12067.;"
Glutamyl-and glutaminyl-tRNA synthetases (EC:6.1.1.- 6.1.1.17)
Glutamyl-Q tRNA(Asp) synthetase n=1 Tax=Phascolarctobacterium succinatutens YIT 12067 RepID=E8LBG1_9FIRM
L3_082_090G1_scaffold_178_12
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

11656..11874
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium succinatutens YIT 12067 RepID=E8LBG2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFY05848.1}; TaxID=626939 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens YIT 12067.;"
L3_082_090G1_scaffold_178_13
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(11955..12380)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IC56_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB46835.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
phenylacetic acid degradation-related protein
L3_082_090G1_scaffold_178_14
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(12414..13370)
DNA (957bp) protein (319aa)
Auxin Efflux Carrier n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IN76_9FIRM
Auxin Efflux Carrier {ECO:0000313|EMBL:CDB46836.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
auxin Efflux Carrier
L3_082_090G1_scaffold_178_15
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(13503..14453)
DNA (951bp) protein (317aa)
Triphosphoribosyl-dephospho-CoA synthase {ECO:0000256|SAAS:SAAS00100821}; EC=2.4.2.52 {ECO:0000256|SAAS:SAAS00100821};; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
citG; triphosphoribosyl-dephospho-CoA synthase (EC:2.7.8.25)
Probable 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6J966_9FIRM
L3_082_090G1_scaffold_178_16
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(14501..15256)
DNA (756bp) protein (252aa)
Malonate transporter MadM subunit n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I9C6_9FIRM
Malonate transporter MadM subunit {ECO:0000313|EMBL:CDB46838.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
malonate transporter, MadM subunit
L3_082_090G1_scaffold_178_17
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(15280..15645)
DNA (366bp) protein (122aa)
Malonate transporter MadL subunit n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IK63_9FIRM
Malonate transporter MadL subunit {ECO:0000313|EMBL:CDB46839.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
malonate transporter subunit MadL
L3_082_090G1_scaffold_178_18
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(15740..15949)
DNA (210bp) protein (70aa)
Biotin/lipoyl attachment domain-containing protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IC63_9FIRM
Biotin/lipoyl attachment domain-containing protein {ECO:0000313|EMBL:CDB46840.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
biotin/lipoyl attachment domain-containing protein
L3_082_090G1_scaffold_178_19
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(16027..16236)
DNA (210bp) protein (70aa)
Biotin/lipoyl attachment domain-containing protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IC63_9FIRM
Biotin/lipoyl attachment domain-containing protein {ECO:0000313|EMBL:CDB46840.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
biotin/lipoyl attachment domain-containing protein
L3_082_090G1_scaffold_178_20
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(16316..17026)
DNA (711bp) protein (237aa)
Holo-ACP synthase malonate decarboxylase-specific n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IN81_9FIRM
Holo-ACP synthase malonate decarboxylase-specific {ECO:0000313|EMBL:CDB46841.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
holo-ACP synthase, malonate decarboxylase-specific
L3_082_090G1_scaffold_178_21
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(17008..18111)
DNA (1104bp) protein (368aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6J973_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB46842.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
hypothetical protein
L3_082_090G1_scaffold_178_22
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(18136..19026)
DNA (891bp) protein (297aa)
Malonate decarboxylase gamma subunit n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I9D0_9FIRM
Malonate decarboxylase gamma subunit {ECO:0000313|EMBL:CDB46843.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
malonate decarboxylase, gamma subunit
L3_082_090G1_scaffold_178_23
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(19046..20005)
DNA (960bp) protein (320aa)
Malonate decarboxylase beta subunit n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IK70_9FIRM
Malonate decarboxylase beta subunit {ECO:0000313|EMBL:CDB46844.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
malonate decarboxylase, beta subunit
L3_082_090G1_scaffold_178_24
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(20007..20333)
DNA (327bp) protein (109aa)
Malonate decarboxylase acyl carrier protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IC67_9FIRM
Malonate decarboxylase acyl carrier protein {ECO:0000313|EMBL:CDB46845.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
Malonate decarboxylase acyl carrier protein
L3_082_090G1_scaffold_178_25
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(20349..22022)
DNA (1674bp) protein (558aa)
Malonate decarboxylase alpha subunit n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IN85_9FIRM
Malonate decarboxylase alpha subunit {ECO:0000313|EMBL:CDB46846.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
malonate decarboxylase, alpha subunit
L3_082_090G1_scaffold_178_26
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(22181..22396)
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6J977_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB46847.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
HutP family protein
L3_082_090G1_scaffold_178_27
Pelosinus fermentans, Pelosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(22377..22631)
DNA (255bp) protein (85aa)
HutP family protein n=1 Tax=Pelosinus fermentans JBW45 RepID=I8TUI4_9FIRM
HutP family protein
HutP family protein {ECO:0000313|EMBL:AJQ26741.1}; Flags: Precursor;; TaxID=1192197 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Pelosinus.;" source="Pelosinus fermentans JBW45.;"
L3_082_090G1_scaffold_178_28
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(22673..23416)
DNA (744bp) protein (248aa)
biotin/acetyl-CoA-carboxylase ligase (EC:6.3.4.15)
Biotin/acetyl-CoA-carboxylase ligase n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I9D7_9FIRM
Biotin/acetyl-CoA-carboxylase ligase {ECO:0000313|EMBL:CDB46848.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
L3_082_090G1_scaffold_178_29
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(23435..24646)
DNA (1212bp) protein (404aa)
Na+-transporting malonate decarboxylase, carboxybiotin decarboxylase subunit (EC:4.1.1.3)
Na+-transporting malonate decarboxylase carboxybiotin decarboxylase subunit n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IK77_9FIRM
Na+-transporting malonate decarboxylase carboxybiotin decarboxylase subunit {ECO:0000313|EMBL:CDB46849.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
L3_082_090G1_scaffold_178_30
unknown

Not on your lists

comp(24649..24777)
DNA (129bp) protein (43aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IC73_9FIRM
Displaying items 1-30 of 74 in total

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