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L3_082_090G1_scaffold_196

Search features with annotation key words

Displaying items 1-30 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_082_090G1_scaffold_196_1
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3..353)
DNA (351bp) protein (117aa)
50S ribosomal protein L11 n=8 Tax=Bacteroides RepID=B0NTF0_BACSE
rplK; putative 50S ribosomal protein L11
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000256|SAAS:SAAS00021680}; TaxID=1073388 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 616.;"
L3_082_090G1_scaffold_196_2
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(414..956)
DNA (543bp) protein (181aa)
Transcription termination/antitermination protein NusG n=16 Tax=Bacteroides RepID=E1WPE9_BACF6
nusG; putative transcription antitermination protein
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=1073387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 615.;"
L3_082_090G1_scaffold_196_3
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1262..2395)
DNA (1134bp) protein (378aa)
Elongation factor Tu n=16 Tax=Bacteroides RepID=EFTU_BACFN
tuf; Elongation factor Tu
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1339310 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3783N1-6.;"
L3_082_090G1_scaffold_196_4
Bacteroides fragilis CAG:558, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2835..3134)
DNA (300bp) protein (100aa)
Sigma-54 modulation protein n=15 Tax=Bacteroides RepID=Q64NI9_BACFR
putative sigma(54) modulation protein
Sigma-54 modulation protein {ECO:0000313|EMBL:CCZ38547.1}; TaxID=1263047 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:558.;"
L3_082_090G1_scaffold_196_5
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3149..4030)
DNA (882bp) protein (294aa)
Tyrosine recombinase XerC n=7 Tax=Bacteroides PF3_BACF6">RepID=E1WPF3_BACF6
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
putative site-specific recombinase
L3_082_090G1_scaffold_196_6
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4104..4295)
DNA (192bp) protein (64aa)
30S ribosomal protein S21 n=14 Tax=Bacteroides RepID=RS21_BACFN
30S ribosomal protein S21
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=1339279 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 20793-3.;"
L3_082_090G1_scaffold_196_7
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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4469..6247
DNA (1779bp) protein (593aa)
Putative peptidase {ECO:0000313|EMBL:CAH09702.1}; EC=3.4.11.9 {ECO:0000313|EMBL:CAH09702.1};; TaxID=272559 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain ATCC 25285 / DSM 2151 / JCM 11019 / NCTC; 9343).;"
putative peptidase (EC:3.4.11.9)
Putative peptidase n=2 Tax=Bacteroides fragilis PF5_BACF6">RepID=E1WPF5_BACF6
L3_082_090G1_scaffold_196_8
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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6342..6854
DNA (513bp) protein (171aa)
Acetyltransferase n=10 Tax=Bacteroides RepID=Q64NI5_BACFR
acetyltransferase
Bacterial transferase hexapeptide family protein {ECO:0000313|EMBL:EYE41857.1}; TaxID=1339329 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S23L17.;"
L3_082_090G1_scaffold_196_9
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(7029..8249)
DNA (1221bp) protein (407aa)
3-deoxy-D-manno-octulosonic-acid transferase n=1 Tax=Bacteroides fragilis (strain YCH46) RepID=Q64NI4_BACFR
3-deoxy-D-manno-octulosonic-acid transferase
3-deoxy-D-manno-octulosonic-acid transferase {ECO:0000313|EMBL:BAD50948.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
L3_082_090G1_scaffold_196_10
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(8262..9779)
DNA (1518bp) protein (506aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1339283 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3996 N(B) 6.;"
gltX; putative glutamyl-tRNA synthetase (EC:6.1.1.17)
Glutamate--tRNA ligase n=9 Tax=Bacteroides RepID=SYE_BACFN
L3_082_090G1_scaffold_196_11
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9874..11931
DNA (2058bp) protein (686aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I3HPP5_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EXY88476.1}; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
putative transmembrane HD family protein
L3_082_090G1_scaffold_196_12
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(11906..12379)
DNA (474bp) protein (158aa)
putative low molecular weight protein-tyrosine-phosphatase (EC:3.1.3.48)
Low molecular weight phosphotyrosine protein phosphatase n=11 Tax=Bacteroides RepID=D1JVT7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EXZ76701.1}; TaxID=1339335 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3-F-2 #6.;"
L3_082_090G1_scaffold_196_13
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12494..14293)
DNA (1800bp) protein (600aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) RepID=Q5L880_BACFN
Uncharacterized protein {ECO:0000313|EMBL:EXY88615.1}; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
hypothetical protein
L3_082_090G1_scaffold_196_14
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(14335..16851)
DNA (2517bp) protein (839aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=997881 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL05T12C13.;"
Primosomal protein N n=4 Tax=Bacteroides RepID=I9V1S7_BACFG
putative primosomal protein N'
L3_082_090G1_scaffold_196_15
Bacteroides sp. 2_1_16, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(16869..17447)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_16 RepID=D1JVT4_9BACE
putative transmembrane protein
Uncharacterized protein {ECO:0000313|EMBL:EEZ24333.1}; TaxID=469587 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_16.;"
L3_082_090G1_scaffold_196_16
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18128..19288)
DNA (1161bp) protein (387aa)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=I8WU83_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EXZ03536.1}; TaxID=1339276 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. DS-208.;"
hypothetical protein
L3_082_090G1_scaffold_196_17
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19435..20868)
DNA (1434bp) protein (478aa)
aspA; putative aspartate ammonia-lyase (EC:4.3.1.1)
Aspartate ammonia-lyase {ECO:0000256|RuleBase:RU362017}; Short=Aspartase {ECO:0000256|RuleBase:RU362017};; EC=4.3.1.1 {ECO:0000256|RuleBase:RU362017};; TaxID=1073387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 615.;"
Aspartate ammonia-lyase n=14 Tax=Bacteroides RepID=Q64NH6_BACFR
L3_082_090G1_scaffold_196_18
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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21188..22498
DNA (1311bp) protein (437aa)
Anaerobic C4-dicarboxylate transporter DcuB n=10 Tax=Bacteroides RepID=Q64NH5_BACFR
putative transmembrane anaerobic C4-dicarboxylate transporter
Transporter, anaerobic C4-dicarboxylate uptake family protein {ECO:0000313|EMBL:EYE41868.1}; TaxID=1339329 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S23L17.;"
L3_082_090G1_scaffold_196_19
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22544..23602
DNA (1059bp) protein (353aa)
L-asparaginase II n=13 Tax=Bacteroides RepID=Q64NH4_BACFR
putative L-asparaginase II
L-asparaginase, type II {ECO:0000313|EMBL:EKA86267.1}; TaxID=1073387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 615.;"
L3_082_090G1_scaffold_196_20
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23635..24822
DNA (1188bp) protein (396aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I8XQ72_BACFG
Uncharacterized protein {ECO:0000313|EMBL:CDD41961.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
hypothetical protein
L3_082_090G1_scaffold_196_21
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24898..25119)
DNA (222bp) protein (74aa)
Putative uncharacterized protein n=1 Tax=Bacteroides helcogenes (strain ATCC 35417 / DSM 20613 / JCM 6297 / P 36-108) RepID=E6SR85_BACT6
Protein of unknown function (DUF2795).
Uncharacterized protein {ECO:0000313|EMBL:BAD51016.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
L3_082_090G1_scaffold_196_22
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25190..25753)
DNA (564bp) protein (188aa)
Cob(I)alamin adenosyltransferase {ECO:0000313|EMBL:EXY82616.1}; EC=2.5.1.17 {ECO:0000313|EMBL:EXY82616.1};; TaxID=1339283 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3996 N(B) 6.;"
ATP:cob(I)alamin adenosyltransferase n=1 Tax=Bacteroides sp. 2_1_16 RepID=D1JVS7_9BACE
putative vitamin B12 related Cobalamin adenosyltransferase
L3_082_090G1_scaffold_196_23
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25802..26464)
DNA (663bp) protein (221aa)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=I3HPN3_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EIY89351.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
hypothetical protein
L3_082_090G1_scaffold_196_24
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26500..26595
DNA (96bp) protein (32aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=I3HPN2_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EIY89350.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
L3_082_090G1_scaffold_196_25
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26534..27493
DNA (960bp) protein (320aa)
Uncharacterized protein n=4 Tax=Bacteroides fragilis RepID=E1WPU8_BACF6
hypothetical protein
Fimbrillin-A associated anchor s Mfa1 and Mfa2 family protein {ECO:0000313|EMBL:EYB07694.1}; TaxID=1339310 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3783N1-6.;"
L3_082_090G1_scaffold_196_26
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27694..28293)
DNA (600bp) protein (200aa)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=I8WU72_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EIY89348.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
hypothetical protein
L3_082_090G1_scaffold_196_27
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28374..29339)
DNA (966bp) protein (322aa)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=I8XSL6_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EXY82620.1}; TaxID=1339283 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3996 N(B) 6.;"
hypothetical protein
L3_082_090G1_scaffold_196_28
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29364..31844)
DNA (2481bp) protein (827aa)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=I9RIG0_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EXY88487.1}; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
hypothetical protein
L3_082_090G1_scaffold_196_29
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31893..32063
DNA (171bp) protein (57aa)
Uncharacterized protein n=10 Tax=Bacteroides RepID=Q64NB2_BACFR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EYE43008.1}; TaxID=1339318 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S6L5.;"
L3_082_090G1_scaffold_196_30
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32290..33222)
DNA (933bp) protein (311aa)
Tyrosine site-specific recombinase n=12 Tax=Bacteroides RepID=E1WPV2_BACF6
tsr26; tyrosine site-specific recombinase
Phage integrase family protein {ECO:0000313|EMBL:EXY88611.1}; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
Displaying items 1-30 of 60 in total

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