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L3_082_090G1_scaffold_216

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_082_090G1_scaffold_216_1
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(120..869)
DNA (750bp) protein (250aa)
Putative uncharacterized protein n=1 Tax=Corynebacterium glutamicum ATCC 14067 RepID=G6WVY0_CORGT
Uncharacterized protein {ECO:0000313|EMBL:KIM01660.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
hypothetical protein
L3_082_090G1_scaffold_216_2
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(866..1747)
DNA (882bp) protein (294aa)
Putative uncharacterized protein n=1 Tax=Corynebacterium glutamicum ATCC 14067 RepID=G6WVX9_CORGT
Uncharacterized protein {ECO:0000313|EMBL:KIM01659.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
hypothetical protein
L3_082_090G1_scaffold_216_3
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1749..3662)
DNA (1914bp) protein (638aa)
Putative uncharacterized protein n=1 Tax=Corynebacterium glutamicum ATCC 14067 RepID=G6WVX8_CORGT
Uncharacterized protein {ECO:0000313|EMBL:KIM01658.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
hypothetical protein
L3_082_090G1_scaffold_216_4
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3659..3883)
DNA (225bp) protein (75aa)
Putative uncharacterized protein n=1 Tax=Corynebacterium glutamicum ATCC 14067 RepID=G6WVX7_CORGT
Uncharacterized protein {ECO:0000313|EMBL:KIM01657.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
hypothetical protein
L3_082_090G1_scaffold_216_5
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4035..5351
DNA (1317bp) protein (439aa)
Cytosine-specific methyltransferase {ECO:0000256|RuleBase:RU000417}; EC=2.1.1.37 {ECO:0000256|RuleBase:RU000417};; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
Cytosine-specific methyltransferase n=1 Tax=Bifidobacterium gallicum DSM 20093 RepID=D1NSN1_9BIFI
DNA-cytosine methyltransferase
L3_082_090G1_scaffold_216_6
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5410..6828
DNA (1419bp) protein (473aa)
Uncharacterized protein n=1 Tax=Bifidobacterium gallicum DSM 20093 RepID=D1NSN2_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:KIM01655.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
hypothetical protein
L3_082_090G1_scaffold_216_7
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6961..7761
DNA (801bp) protein (267aa)
Uncharacterized protein {ECO:0000313|EMBL:KIM01654.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_082_090G1_scaffold_216_8
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8253..8666
DNA (414bp) protein (138aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=A7A5Q7_BIFAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIM01653.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_082_090G1_scaffold_216_9
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8792..10921)
DNA (2130bp) protein (710aa)
Ribosome biogenesis GTPase Der n=2 Tax=Bifidobacterium RepID=A7A5Q8_BIFAD
cytidylate kinase
GTPase Der {ECO:0000256|SAAS:SAAS00038180}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_082_090G1_scaffold_216_10
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10918..11691)
DNA (774bp) protein (258aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
Pseudouridine synthase n=2 Tax=Bifidobacterium RepID=R5H7D9_9BIFI
Ribosomal large subunit pseudouridine synthase B
L3_082_090G1_scaffold_216_11
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11804..12739
DNA (936bp) protein (312aa)
Transporter, major intrinsic protein (MIP) family protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A5R1_BIFAD
membrane channel protein
Membrane channel protein {ECO:0000313|EMBL:KFI98446.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
L3_082_090G1_scaffold_216_12
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12653..12937)
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GY19_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:KFI98447.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
hypothetical protein
L3_082_090G1_scaffold_216_13
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13094..14725)
DNA (1632bp) protein (544aa)
Bifunctional purine biosynthesis protein PurH n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GU30_9BIFI
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
L3_082_090G1_scaffold_216_14
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14670..16058)
DNA (1389bp) protein (463aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5H6Y2_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:KFI98449.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
hypothetical protein
L3_082_090G1_scaffold_216_15
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16055..16978)
DNA (924bp) protein (308aa)
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
Succinyl-CoA ligase [ADP-forming] subunit alpha n=2 Tax=Bifidobacterium RepID=A1A1K7_BIFAA
succinyl-CoA ligase
L3_082_090G1_scaffold_216_16
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16980..18167)
DNA (1188bp) protein (396aa)
Succinate-CoA ligase, beta subunit {ECO:0000313|EMBL:EDN82904.1}; EC=6.2.1.- {ECO:0000313|EMBL:EDN82904.1};; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
Succinate-CoA ligase, beta subunit n=2 Tax=Bifidobacterium RepID=A7A5R6_BIFAD
succinyl-CoA synthetase beta chain
L3_082_090G1_scaffold_216_17
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18219..18800)
DNA (582bp) protein (194aa)
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084274}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084255};; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
Adenine phosphoribosyltransferase n=2 Tax=Bifidobacterium RepID=A7A5R7_BIFAD
adenine phosphoribosyltransferase
L3_082_090G1_scaffold_216_18
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18916..19329)
DNA (414bp) protein (138aa)
Preprotein translocase, YajC subunit n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A5R8_BIFAD
translocase subunit YajC
Translocase subunit YajC {ECO:0000313|EMBL:AII76274.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_082_090G1_scaffold_216_19
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19386..20474)
DNA (1089bp) protein (363aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A5R9_BIFAD
Holliday junction DNA helicase RuvB
L3_082_090G1_scaffold_216_20
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20471..21088)
DNA (618bp) protein (206aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5H7C9_9BIFI
holliday junction ATP-dependent DNA helicase ruvA
L3_082_090G1_scaffold_216_21
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21136..21717)
DNA (582bp) protein (194aa)
ruvC; Holliday junction resolvase (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
Crossover junction endodeoxyribonuclease RuvC n=2 Tax=Bifidobacterium adolescentis RepID=RUVC_BIFAA
L3_082_090G1_scaffold_216_22
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21724..22479)
DNA (756bp) protein (252aa)
Probable transcriptional regulatory protein BIFADO_01197 n=2 Tax=Bifidobacterium RepID=A7A5S2_BIFAD
hypothetical protein
Probable transcriptional regulatory protein BADO_0851 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_082_090G1_scaffold_216_23
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22610..23272)
DNA (663bp) protein (221aa)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=3 Tax=Bifidobacterium RepID=A1A1J9_BIFAA
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:KIM01641.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_082_090G1_scaffold_216_24
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23386..25419)
DNA (2034bp) protein (678aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
Threonine--tRNA ligase n=3 Tax=Bifidobacterium RepID=A1A1J8_BIFAA
threonyl-tRNA synthetase
L3_082_090G1_scaffold_216_25
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25581..26408)
DNA (828bp) protein (276aa)
Uncharacterized protein n=3 Tax=Bifidobacterium RepID=A1A1J7_BIFAA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAF39580.1}; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
L3_082_090G1_scaffold_216_26
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26415..26747)
DNA (333bp) protein (111aa)
Uncharacterized protein n=3 Tax=Bifidobacterium RepID=A1A1J6_BIFAA
hypothetical protein
Membrane protein {ECO:0000313|EMBL:KIM01638.1}; Uncharacterized protein {ECO:0000313|EMBL:AII76266.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_082_090G1_scaffold_216_27
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26747..27718)
DNA (972bp) protein (324aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=A1A1J5_BIFAA
Uncharacterized protein {ECO:0000313|EMBL:KFI98462.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
hypothetical protein
L3_082_090G1_scaffold_216_28
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27726..28337)
DNA (612bp) protein (204aa)
Possible CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyl-transferase n=3 Tax=Bifidobacterium RepID=A1A1J4_BIFAA
pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
Possible CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyl-transferase {ECO:0000313|EMBL:BAF39577.1}; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
L3_082_090G1_scaffold_216_29
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28351..29202)
DNA (852bp) protein (284aa)
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00079, ECO:0000256|SAAS:SAAS00046302}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_00079};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_00079};; EC=2.4.2.17 {ECO:0000256|HAMAP-Rule:MF_00079, ECO:0000256|SAAS:SAAS00046302};; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
ATP phosphoribosyltransferase n=3 Tax=Bifidobacterium RepID=HIS1_BIFAA
ATP phosphoribosyltransferase
L3_082_090G1_scaffold_216_30
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29254..29517)
DNA (264bp) protein (88aa)
Phosphoribosyl-ATP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01020, ECO:0000256|SAAS:SAAS00071052}; Short=PRA-PH {ECO:0000256|HAMAP-Rule:MF_01020};; EC=3.6.1.31 {ECO:0000256|HAMAP-Rule:MF_01020, ECO:0000256|SAAS:SAAS00071044};; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
Phosphoribosyl-ATP pyrophosphatase n=4 Tax=Bifidobacterium RepID=HIS2_BIFAA
phosphoribosyl-ATP pyrophosphatase
Displaying items 1-30 of 57 in total

View Taxonomy