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L3_082_090G1_scaffold_230

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Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_082_090G1_scaffold_230_1
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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274..651
DNA (378bp) protein (126aa)
30S ribosomal protein S12 n=2 Tax=Collinsella RepID=A4E9H5_9ACTN
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
30S ribosomal protein S12P
L3_082_090G1_scaffold_230_2
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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725..1198
DNA (474bp) protein (158aa)
30S ribosomal protein S7 n=2 Tax=Collinsella RepID=A4E9H6_9ACTN
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
30S ribosomal protein S7
L3_082_090G1_scaffold_230_3
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

1218..3317
DNA (2100bp) protein (700aa)
Elongation factor G n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z5X8_9ACTN
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
translation elongation factor 2 (EF-2/EF-G)
L3_082_090G1_scaffold_230_4
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


3378..3686
DNA (309bp) protein (103aa)
30S ribosomal protein S10 n=2 Tax=Collinsella RepID=R5ZEZ0_9ACTN
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
30S ribosomal protein S10P
L3_082_090G1_scaffold_230_5
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(3802..4578)
DNA (777bp) protein (259aa)
birA; biotin--acetyl-CoA-carboxylase ligase (EC:6.3.4.15)
Biotin--[acetyl-CoA-carboxylase] ligase n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z8C9_9ACTN
Biotin--[acetyl-CoA-carboxylase] ligase {ECO:0000313|EMBL:CDA35135.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L3_082_090G1_scaffold_230_6
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

4755..5714
DNA (960bp) protein (320aa)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; Beta-ketoacyl-ACP synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
fabH; 3-oxoacyl-ACP synthase (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9I1_9ACTN
L3_082_090G1_scaffold_230_7
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

5764..6000
DNA (237bp) protein (79aa)
Acyl carrier protein n=2 Tax=Collinsella RepID=A4E9I2_9ACTN
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
acpP; acyl carrier protein
L3_082_090G1_scaffold_230_8
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

6003..6947
DNA (945bp) protein (315aa)
Putative enoyl-[acyl-carrier-protein] reductase II {ECO:0000313|EMBL:EBA39928.1}; EC=1.3.-.- {ECO:0000313|EMBL:EBA39928.1};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Putative enoyl-[acyl-carrier-protein] reductase II n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9I3_9ACTN
2-nitropropane dioxygenase
L3_082_090G1_scaffold_230_9
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

6935..7861
DNA (927bp) protein (309aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
malonyl CoA-acyl carrier protein transacylase (EC:2.3.1.39)
Malonyl CoA-acyl carrier protein transacylase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9I4_9ACTN
L3_082_090G1_scaffold_230_10
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

7892..8665
DNA (774bp) protein (258aa)
3-oxoacyl-[acyl-carrier-protein] reductase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9I5_9ACTN
3-oxoacyl-[acyl-carrier-protein] reductase {ECO:0000313|EMBL:KGI74742.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
3-oxoacyl-ACP reductase
L3_082_090G1_scaffold_230_11
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

8705..9952
DNA (1248bp) protein (416aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
3-oxoacyl-[acyl-carrier-protein] synthase II (EC:2.3.1.41 2.3.1.179)
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9I6_9ACTN
L3_082_090G1_scaffold_230_12
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

9956..10435
DNA (480bp) protein (160aa)
Acetyl-CoA carboxylase, biotin carboxyl carrier protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9I7_9ACTN
Acetyl-CoA carboxylase, biotin carboxyl carrier protein {ECO:0000313|EMBL:EBA39932.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L3_082_090G1_scaffold_230_13
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

10445..10867
DNA (423bp) protein (141aa)
fabZ; beta-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ (EC:4.2.1.-)
(3R)-hydroxymyristoyl-ACP dehydratase n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z5Y8_9ACTN
(3R)-hydroxymyristoyl-ACP dehydratase {ECO:0000313|EMBL:CDA35143.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L3_082_090G1_scaffold_230_14
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

10878..12221
DNA (1344bp) protein (448aa)
biotin carboxylase/acetyl-CoA carboxylase carboxyltransferase subunit alpha (EC:6.3.4.14 6.4.1.2)
Putative acetyl-CoA carboxylase, biotin carboxylase subunit n=2 Tax=Collinsella RepID=A4E9I9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74738.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L3_082_090G1_scaffold_230_15
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

12208..13932
DNA (1725bp) protein (575aa)
Acetyl-CoA carboxylase {ECO:0000256|SAAS:SAAS00057486}; EC=6.4.1.2 {ECO:0000256|SAAS:SAAS00057486};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Acetyl-CoA carboxylase, carboxyl transferase, beta subunit n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9J0_9ACTN
acetyl-coA carboxylase carboxyl transferase subunit beta/alpha
L3_082_090G1_scaffold_230_16
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

14024..15187
DNA (1164bp) protein (388aa)
Phosphotransferase system, EIIC n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9J1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74736.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
PTS system beta-glucoside specific transporter subunit IIBC
L3_082_090G1_scaffold_230_17
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

15338..16492
DNA (1155bp) protein (385aa)
Cation diffusion facilitator family transporter n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9J2_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74735.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
cation diffusion facilitator family transporter
L3_082_090G1_scaffold_230_18
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

16532..17158
DNA (627bp) protein (209aa)
Phosphoglycerate mutase family protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9J3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74734.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
phosphoglycerate mutase
L3_082_090G1_scaffold_230_19
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


17617..18228
DNA (612bp) protein (204aa)
50S ribosomal protein L3 n=2 Tax=Collinsella RepID=A4E9J4_9ACTN
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
50S ribosomal protein L3
L3_082_090G1_scaffold_230_20
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


18275..18901
DNA (627bp) protein (209aa)
50S ribosomal protein L4 n=2 Tax=Collinsella RepID=A4E9J5_9ACTN
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
50S ribosomal protein L4
L3_082_090G1_scaffold_230_21
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


18902..19189
DNA (288bp) protein (96aa)
50S ribosomal protein L23 n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z8E0_9ACTN
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369, ECO:0000256|RuleBase:RU003935}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
50S ribosomal protein L23
L3_082_090G1_scaffold_230_22
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


19336..20199
DNA (864bp) protein (288aa)
50S ribosomal protein L2 n=2 Tax=Collinsella RepID=A4E9J7_9ACTN
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
50S ribosomal protein L2
L3_082_090G1_scaffold_230_23
Collinsella sp. CAG:289, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


20232..20492
DNA (261bp) protein (87aa)
30S ribosomal protein S19 n=4 Tax=Collinsella RepID=A4E9J8_9ACTN
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=1262851 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:289.;"
30S ribosomal protein S19P
L3_082_090G1_scaffold_230_24
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


20507..20878
DNA (372bp) protein (124aa)
50S ribosomal protein L22 n=2 Tax=Collinsella RepID=A4E9J9_9ACTN
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
50S ribosomal protein L22
L3_082_090G1_scaffold_230_25
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


20885..21595
DNA (711bp) protein (237aa)
30S ribosomal protein S3 n=2 Tax=Collinsella RepID=A4E9K0_9ACTN
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
30S ribosomal protein S3P
L3_082_090G1_scaffold_230_26
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


21595..22098
DNA (504bp) protein (168aa)
50S ribosomal protein L16 n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z8E3_9ACTN
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
50S ribosomal protein L16
L3_082_090G1_scaffold_230_27
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


22098..22313
DNA (216bp) protein (72aa)
50S ribosomal protein L29 n=2 Tax=Collinsella RepID=A4E9K2_9ACTN
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
50S ribosomal protein L29
L3_082_090G1_scaffold_230_28
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


22330..22590
DNA (261bp) protein (87aa)
30S ribosomal protein S17 n=2 Tax=Collinsella RepID=A4E9K3_9ACTN
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
30S ribosomal protein S17P
L3_082_090G1_scaffold_230_29
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


22709..23077
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=2 Tax=Collinsella RepID=A4E9K5_9ACTN
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
50S ribosomal protein L14
L3_082_090G1_scaffold_230_30
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


23091..23396
DNA (306bp) protein (102aa)
50S ribosomal protein L24 n=2 Tax=Collinsella RepID=A4E9K6_9ACTN
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
50S ribosomal protein L24
Displaying items 1-30 of 56 in total

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