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L3_082_090G1_scaffold_233

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_082_090G1_scaffold_233_1
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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2..799
DNA (798bp) protein (266aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A617_BIFAD
16S ribosomal RNA methyltransferase RsmE
L3_082_090G1_scaffold_233_2
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

894..1229
DNA (336bp) protein (112aa)
Uncharacterized protein n=3 Tax=Bifidobacterium RepID=A1A1B7_BIFAA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAF39500.1}; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
L3_082_090G1_scaffold_233_3
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1267..2400
DNA (1134bp) protein (378aa)
PhoH-like protein n=3 Tax=Bifidobacterium RepID=A1A1B8_BIFAA
PhoH-like protein
PhoH-like protein {ECO:0000313|EMBL:KFI98539.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
L3_082_090G1_scaffold_233_4
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2401..2946
DNA (546bp) protein (182aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
Endoribonuclease YbeY n=2 Tax=Bifidobacterium RepID=A7A614_BIFAD
putative metalloprotease
L3_082_090G1_scaffold_233_5
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2995..4413
DNA (1419bp) protein (473aa)
CBS domain protein n=3 Tax=Bifidobacterium RepID=A7A613_BIFAD
CBS domain containing protein
CBS domain protein {ECO:0000313|EMBL:EDN83001.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
L3_082_090G1_scaffold_233_6
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4406..5404
DNA (999bp) protein (333aa)
GTPase Era n=3 Tax=Bifidobacterium RepID=A1A1C1_BIFAA
GTP-binding protein
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
L3_082_090G1_scaffold_233_7
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5597..7633)
DNA (2037bp) protein (679aa)
Long-chain-fatty-acid-CoA ligase n=2 Tax=Bifidobacterium adolescentis RepID=A1A1C2_BIFAA
AMP-binding enzyme {ECO:0000313|EMBL:EDN82999.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
long-chain-fatty-acid-CoA ligase
L3_082_090G1_scaffold_233_8
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7869..9014
DNA (1146bp) protein (382aa)
NAD(P) transhydrogenase subunit alpha part 1 n=3 Tax=Bifidobacterium RepID=A1A1C3_BIFAA
NAD(P) transhydrogenase subunit alpha part 1
NAD(P) transhydrogenase subunit alpha part 1 {ECO:0000313|EMBL:CCY18875.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
L3_082_090G1_scaffold_233_9
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9019..9324
DNA (306bp) protein (102aa)
NAD/NADP transhydrogenase alpha subunit-like protein (EC:1.6.1.2)
NAD/NADP transhydrogenase alpha subunit-like protein n=9 Tax=Bifidobacterium RepID=D2QA53_BIFDB
NAD(P) transhydrogenase alpha-2 subunit {ECO:0000313|EMBL:BAR01741.1}; Uncharacterized protein {ECO:0000313|EMBL:EEB21975.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
L3_082_090G1_scaffold_233_10
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9325..10770
DNA (1446bp) protein (482aa)
NAD(P) transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}; EC=1.6.1.2 {ECO:0000256|PIRNR:PIRNR000204};; Nicotinamide nucleotide transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
NAD(P) transhydrogenase subunit beta n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5H1P2_9BIFI
NAD(P) transhydrogenase subunit beta
L3_082_090G1_scaffold_233_11
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10977..12344
DNA (1368bp) protein (456aa)
Uncharacterized protein n=3 Tax=Bifidobacterium RepID=A7A606_BIFAD
putative riboflavin-specific deaminase
Putative riboflavin-specific deaminase {ECO:0000313|EMBL:AII76195.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_082_090G1_scaffold_233_12
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12463..13812
DNA (1350bp) protein (450aa)
MATE efflux family protein n=3 Tax=Bifidobacterium RepID=A7A604_BIFAD
putative Na -driven multidrug efflux pump
Putative Na+-driven multidrug efflux pump {ECO:0000313|EMBL:CCY18868.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
L3_082_090G1_scaffold_233_13
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13809..14669
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A1C7_BIFAA
transcriptional regulator of multidrug-efflux transporter
Transcriptional regulator of multidrug-efflux transporter {ECO:0000313|EMBL:AII76197.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_082_090G1_scaffold_233_14
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14693..15091)
DNA (399bp) protein (133aa)
Uncharacterized protein n=3 Tax=Bifidobacterium RepID=A1A1C8_BIFAA
hypothetical protein
Putative aldo/keto reductase family oxidoreductase {ECO:0000313|EMBL:AII76198.1}; Uncharacterized protein {ECO:0000313|EMBL:AJE05826.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_082_090G1_scaffold_233_15
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15167..15262)
DNA (96bp) protein (32aa)
aldo/keto reductase (EC:1.1.1.188)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GNP3_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CCY18863.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
L3_082_090G1_scaffold_233_16
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15457..15864
DNA (408bp) protein (136aa)
Cupin domain protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A601_BIFAD
putative outer membrane protein probably involved in nutrient binding
Uncharacterized protein {ECO:0000313|EMBL:KFI98528.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
L3_082_090G1_scaffold_233_17
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16040..16516
DNA (477bp) protein (159aa)
MarR-family regulatory protein n=3 Tax=Bifidobacterium RepID=A1A1D0_BIFAA
MarR-family regulatory protein
ArsR family transcriptional regulator {ECO:0000313|EMBL:KIM01339.1}; MarR family regulatory protein {ECO:0000313|EMBL:AII76200.1}; MarR-family regulatory protein {ECO:0000313|EMBL:AJE05828.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_082_090G1_scaffold_233_18
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16513..17889
DNA (1377bp) protein (459aa)
Transporter major facilitator family protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5H1M4_9BIFI
putative major facilitator superfamily transporter
Putative major facilitator superfamily transporter {ECO:0000313|EMBL:AII76201.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_082_090G1_scaffold_233_19
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18043..18576
DNA (534bp) protein (178aa)
Protein crcB homolog 2 n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A1D2_BIFAA
protein crcB-like protein 2
Putative fluoride ion transporter CrcB {ECO:0000256|HAMAP-Rule:MF_00454}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_082_090G1_scaffold_233_20
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18576..18950
DNA (375bp) protein (125aa)
Putative fluoride ion transporter CrcB n=3 Tax=Bifidobacterium RepID=A1A1D3_BIFAA
protein crcB-like protein 3
Putative fluoride ion transporter CrcB {ECO:0000256|HAMAP-Rule:MF_00454}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
L3_082_090G1_scaffold_233_21
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19131..19748
DNA (618bp) protein (206aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=A7A5Z6_BIFAD
hypothetical protein
ABC transporter permease {ECO:0000313|EMBL:AII76204.1}; Uncharacterized protein {ECO:0000313|EMBL:AJE05832.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_082_090G1_scaffold_233_22
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19748..20434
DNA (687bp) protein (229aa)
Possible ABC transporter permease for cobalt n=3 Tax=Bifidobacterium RepID=A1A1D5_BIFAA
cobalt ABC transporter permease
Cobalt ABC transporter permease {ECO:0000313|EMBL:AII76205.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_082_090G1_scaffold_233_23
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20380..21975
DNA (1596bp) protein (532aa)
ATP binding protein of ABC transporter n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A1D6_BIFAA
ATP binding protein of ABC transporter
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KIM01345.1}; ATP binding protein of ABC transporter {ECO:0000313|EMBL:AII76206.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_082_090G1_scaffold_233_24
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21960..22628
DNA (669bp) protein (223aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=A7A5Z3_BIFAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDN82981.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
L3_082_090G1_scaffold_233_25
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22656..25208)
DNA (2553bp) protein (851aa)
Excinuclease subunit A n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GNM5_9BIFI
Excinuclease subunit A {ECO:0000313|EMBL:AII76208.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
excinuclease subunit A
L3_082_090G1_scaffold_233_26
Bifidobacterium ruminantium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25232..25645
DNA (414bp) protein (138aa)
Acetyltransferase, GNAT family n=2 Tax=Bifidobacterium RepID=A7A5Z1_BIFAD
Histone acetyltransferase
Acetyltransferase, GNAT family {ECO:0000313|EMBL:KFI89737.1}; TaxID=78346 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium ruminantium.;"
L3_082_090G1_scaffold_233_27
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25749..26750)
DNA (1002bp) protein (334aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=A7A5Z0_BIFAD
hypothetical protein
Alpha/beta hydrolase {ECO:0000313|EMBL:AII76210.1}; Uncharacterized protein {ECO:0000313|EMBL:AJE05838.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_082_090G1_scaffold_233_28
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


27011..27619
DNA (609bp) protein (203aa)
50S ribosomal protein L25 n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A5Y9_BIFAD
50S ribosomal protein L25/general stress protein Ctc
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_082_090G1_scaffold_233_29
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27869..28996
DNA (1128bp) protein (376aa)
Branched-chain-amino-acid transaminase n=3 Tax=Bifidobacterium RepID=A7A5Y7_BIFAD
branched-chain amino acid aminotransferase
Branched-chain amino acid aminotransferase {ECO:0000313|EMBL:AII76212.1}; Putative branched-chain amino acid aminotransferase {ECO:0000313|EMBL:AJE05841.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_082_090G1_scaffold_233_30
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29192..29932
DNA (741bp) protein (247aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=A7A5Y6_BIFAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDN82974.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
Displaying items 1-30 of 51 in total

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