ggKbase home page

L3_082_090G1_scaffold_237

Search features with annotation key words

Displaying items 1-30 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_082_090G1_scaffold_237_1
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31..198
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TRM1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68365.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L3_082_090G1_scaffold_237_2
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

360..800
DNA (441bp) protein (147aa)
Ribose-5-phosphate isomerase B {ECO:0000313|EMBL:EDN78301.1}; EC=5.3.1.6 {ECO:0000313|EMBL:EDN78301.1};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
ribose-5-phosphate isomerase (EC:5.3.1.6)
Ribose-5-phosphate isomerase B n=4 Tax=Clostridiales RepID=A7B230_RUMGN
L3_082_090G1_scaffold_237_3
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(881..1675)
DNA (795bp) protein (265aa)
Cof-like hydrolase n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UHT1_9FIRM
Cof-like hydrolase {ECO:0000313|EMBL:CCZ68367.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
HAD-superfamily hydrolase, subfamily IIB
L3_082_090G1_scaffold_237_4
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1845..3191
DNA (1347bp) protein (449aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327};; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
phosphoglucosamine mutase (EC:5.4.2.10)
Phosphoglucosamine mutase n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B233_RUMGN
L3_082_090G1_scaffold_237_5
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3242..4030)
DNA (789bp) protein (263aa)
DNA-binding helix-turn-helix protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B234_RUMGN
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EDN78306.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
putative Xre family DNA-binding protein
L3_082_090G1_scaffold_237_6
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4156..4653
DNA (498bp) protein (166aa)
Sporulation initiation factor Spo0A domain protein n=3 Tax=Lachnospiraceae RepID=A7B235_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN46964.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_082_090G1_scaffold_237_7
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4720..5484
DNA (765bp) protein (255aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=V8BX46_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN46963.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L3_082_090G1_scaffold_237_8
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5496..5963)
DNA (468bp) protein (156aa)
NADH dehydrogenase subunit E n=4 Tax=Clostridiales RepID=A7B237_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN46962.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
putative NADH-ubiquinone oxidoreductase
L3_082_090G1_scaffold_237_9
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6065..7351)
DNA (1287bp) protein (429aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TRE8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68373.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Hemolysins and related proteins containing CBS domains
L3_082_090G1_scaffold_237_10
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7457..8443
DNA (987bp) protein (329aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
UDP-N-acetylmuramate dehydrogenase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase n=3 Tax=Lachnospiraceae RepID=A7B239_RUMGN
L3_082_090G1_scaffold_237_11
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8447..9325
DNA (879bp) protein (293aa)
UPF0042 nucleotide-binding protein RUMGNA_01616 n=3 Tax=Lachnospiraceae RepID=A7B240_RUMGN
Nucleotide-binding protein HMPREF1201_01492 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
Predicted P-loop-containing kinase
L3_082_090G1_scaffold_237_12
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9338..10300
DNA (963bp) protein (321aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=V8BX42_RUMGN
Putative sporulation transcription regulator WhiA {ECO:0000256|HAMAP-Rule:MF_01420, ECO:0000256|SAAS:SAAS00005305}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L3_082_090G1_scaffold_237_13
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10293..10550
DNA (258bp) protein (86aa)
Phosphocarrier, HPr family n=4 Tax=Clostridiales RepID=A7B242_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN46957.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Phosphotransferase System HPr (HPr) Family
L3_082_090G1_scaffold_237_14
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10620..11600
DNA (981bp) protein (327aa)
Lipid kinase, YegS/Rv2252/BmrU family n=3 Tax=Lachnospiraceae RepID=A7B243_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD19343.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
conserved protein of unknown function cotranscribed with Bmr (bmrU)
L3_082_090G1_scaffold_237_15
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12327..12695)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B244_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN78317.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
L3_082_090G1_scaffold_237_16
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12846..12959
DNA (114bp) protein (38aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7B246_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN46955.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L3_082_090G1_scaffold_237_17
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13033..13902
DNA (870bp) protein (290aa)
fructose-1,6-bisphosphate aldolase, class II, various bacterial and amitochondriate protist (EC:4.1.2.13)
Fructose-1,6-bisphosphate aldolase, class II n=4 Tax=Clostridiales RepID=A7B247_RUMGN
Fructose-1,6-bisphosphate aldolase, class II {ECO:0000313|EMBL:ETD19341.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L3_082_090G1_scaffold_237_18
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14056..16170
DNA (2115bp) protein (705aa)
Glutamate--ammonia ligase, catalytic domain protein {ECO:0000313|EMBL:EDN78320.1}; EC=6.3.1.2 {ECO:0000313|EMBL:EDN78320.1};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Uncharacterized protein related to glutamine synthetase (EC:6.3.1.2)
Glutamate--ammonia ligase, catalytic domain protein n=2 Tax=Clostridiales RepID=A7B248_RUMGN
L3_082_090G1_scaffold_237_19
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16255..17958
DNA (1704bp) protein (568aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R5TYJ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN46952.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Predicted ATPase of the ABC class
L3_082_090G1_scaffold_237_20
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17977..19131
DNA (1155bp) protein (385aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TRS7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN46951.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
exonuclease SbcD
L3_082_090G1_scaffold_237_21
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19132..21792
DNA (2661bp) protein (887aa)
Exonuclease SbcCD C subunit n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UB87_9FIRM
Exonuclease SbcCD C subunit {ECO:0000313|EMBL:CCZ68421.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
ATPase involved in DNA repair
L3_082_090G1_scaffold_237_22
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21812..22816
DNA (1005bp) protein (335aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BXW0_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN46949.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Lysophospholipase L1 and related esterases
L3_082_090G1_scaffold_237_23
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22929..23900
DNA (972bp) protein (324aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BX31_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN46948.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
ABC-type multidrug transport system, ATPase component
L3_082_090G1_scaffold_237_24
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23884..24750
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TYJ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68424.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L3_082_090G1_scaffold_237_25
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24763..26148
DNA (1386bp) protein (462aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BVY0_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN46946.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
AraC family transcriptional regulator
L3_082_090G1_scaffold_237_26
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26174..27088
DNA (915bp) protein (305aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7B256_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN46945.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L3_082_090G1_scaffold_237_27
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27202..27615
DNA (414bp) protein (138aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7B257_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN46944.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L3_082_090G1_scaffold_237_28
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27661..28335
DNA (675bp) protein (225aa)
DnaJ domain protein n=2 Tax=Clostridiales RepID=A7B258_RUMGN
DnaJ domain protein {ECO:0000313|EMBL:EDN78330.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
DnaJ-class molecular chaperone with C-terminal Zn finger domain
L3_082_090G1_scaffold_237_29
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28535..29032
DNA (498bp) protein (166aa)
Beta-galactosidase large subunit n=1 Tax=Lachnospiraceae bacterium 2_1_58FAA RepID=F7JYD6_9FIRM
Beta-galactosidase large subunit {ECO:0000313|EMBL:EGN46942.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
glycoside hydrolase family protein
L3_082_090G1_scaffold_237_30
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29427..30089
DNA (663bp) protein (221aa)
lacL; beta-galactosidase, large subunit (EC:3.2.1.23)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CC55_001C RepID=V8BW26_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD19329.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
Displaying items 1-30 of 59 in total

View Taxonomy