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L3_082_090G1_scaffold_238

Search features with annotation key words

Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_082_090G1_scaffold_238_1
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2..76
DNA (75bp) protein (25aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis HMW 616 RepID=K1GBB1_BACFG
hypothetical protein
Putative exported protein {ECO:0000313|EMBL:CDD43479.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
L3_082_090G1_scaffold_238_2
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(183..608)
DNA (426bp) protein (142aa)
Uncharacterized protein n=14 Tax=Bacteroides RepID=Q64X31_BACFR
hslR; putative ribosome-associated heat shock protein
S4 domain protein {ECO:0000313|EMBL:EYE46682.1}; TaxID=1339329 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S23L17.;"
L3_082_090G1_scaffold_238_3
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(635..1198)
DNA (564bp) protein (188aa)
pth; putative peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; TaxID=1339327 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S36L11.;"
Peptidyl-tRNA hydrolase n=14 Tax=Bacteroides RepID=PTH_BACFN
L3_082_090G1_scaffold_238_4
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1305..1895)
DNA (591bp) protein (197aa)
50S ribosomal protein L25 n=14 Tax=Bacteroides RepID=RL25_BACFN
putative ribosomal L25p family stress protein
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
L3_082_090G1_scaffold_238_5
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2040..2426)
DNA (387bp) protein (129aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=D1JJS0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EXY91620.1}; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
hypothetical protein
L3_082_090G1_scaffold_238_6
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2532..3521
DNA (990bp) protein (330aa)
Transcription antitermination factor NusB n=11 Tax=Bacteroides RepID=C6I4P1_9BACE
N utilization substance protein B homolog {ECO:0000256|SAAS:SAAS00057003}; TaxID=997878 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL03T00C08.;"
putative N utilization substance protein
L3_082_090G1_scaffold_238_7
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3568..3894
DNA (327bp) protein (109aa)
Uncharacterized protein n=18 Tax=Bacteroides RepID=E1WQZ6_BACF6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAD47950.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
L3_082_090G1_scaffold_238_8
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3918..4931
DNA (1014bp) protein (338aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=Q64X25_BACFR
hypothetical protein
YbbR-like family protein {ECO:0000313|EMBL:EXY91645.1}; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
L3_082_090G1_scaffold_238_9
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4921..5538
DNA (618bp) protein (206aa)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
Dephospho-CoA kinase n=9 Tax=Bacteroides RepID=COAE_BACFR
putative dephospho-CoA kinase
L3_082_090G1_scaffold_238_10
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5556..5972
DNA (417bp) protein (139aa)
Uncharacterized protein n=9 Tax=Bacteroides RepID=Q5LG49_BACFN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EXZ95446.1}; TaxID=1339269 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. Korea 419.;"
L3_082_090G1_scaffold_238_11
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6489..6698
DNA (210bp) protein (70aa)
Uncharacterized protein n=14 Tax=Bacteroides RepID=E1WR17_BACF6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EXZ54611.1}; TaxID=1339299 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3397 T14.;"
L3_082_090G1_scaffold_238_12
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6774..9362)
DNA (2589bp) protein (863aa)
ATP-dependent chaperone protein ClpB n=4 Tax=Bacteroides RepID=D1JJS7_9BACE
clpB; putative heat shock ClpB protein
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
L3_082_090G1_scaffold_238_13
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9585..10166
DNA (582bp) protein (194aa)
Uncharacterized protein n=9 Tax=Bacteroides RepID=E1WR19_BACF6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY99918.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
L3_082_090G1_scaffold_238_14
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10191..11087
DNA (897bp) protein (299aa)
Uncharacterized protein n=12 Tax=Bacteroides RepID=C6I4N3_9BACE
putative transcriptional regulator
Bacterial regulatory helix-turn-helix , lysR family protein {ECO:0000313|EMBL:EYE55418.1}; TaxID=1339318 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S6L5.;"
L3_082_090G1_scaffold_238_15
Bacteroides sp. 2_1_16, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11167..12159
DNA (993bp) protein (331aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=D1JJT0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEZ26617.1}; TaxID=469587 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_16.;"
hypothetical protein
L3_082_090G1_scaffold_238_16
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12248..12931)
DNA (684bp) protein (228aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=Q64X17_BACFR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAD47959.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
L3_082_090G1_scaffold_238_17
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12938..13465)
DNA (528bp) protein (176aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=Q64X16_BACFR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKA87350.1}; TaxID=1073387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 615.;"
L3_082_090G1_scaffold_238_18
Bacteroides sp. 2_1_16, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13446..13961)
DNA (516bp) protein (172aa)
Sigma-70 region 2 n=1 Tax=Bacteroides sp. 2_1_16 RepID=D1JJT3_9BACE
Sigma-70 region 2 {ECO:0000313|EMBL:EEZ26620.1}; TaxID=469587 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_16.;"
putative RNA polymerase ECF-type sigma factor
L3_082_090G1_scaffold_238_19
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14046..14327
DNA (282bp) protein (94aa)
Uncharacterized protein n=9 Tax=Bacteroides RepID=Q64X14_BACFR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY99924.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
L3_082_090G1_scaffold_238_20
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(14393..15436)
DNA (1044bp) protein (348aa)
Protein RecA n=4 Tax=Bacteroides RepID=E4VPT8_BACFG
RecA
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=1339315 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3988T(B)14.;"
L3_082_090G1_scaffold_238_21
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15447..15893)
DNA (447bp) protein (149aa)
Uncharacterized protein n=12 Tax=Bacteroides RepID=C6I4M6_9BACE
bcp; putative bacterioferritin comigratory protein
AhpC/TSA family protein {ECO:0000313|EMBL:EXY75092.1}; TaxID=1339315 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3988T(B)14.;"
L3_082_090G1_scaffold_238_22
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15976..17169)
DNA (1194bp) protein (398aa)
Uncharacterized protein n=12 Tax=Bacteroides RepID=E1WR28_BACF6
hypothetical protein
Saccharopine dehydrogenase family protein {ECO:0000313|EMBL:EYB10785.1}; TaxID=1339310 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3783N1-6.;"
L3_082_090G1_scaffold_238_23
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17264..18514)
DNA (1251bp) protein (417aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_16 RepID=D1JJT8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EXY85489.1}; TaxID=1339283 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3996 N(B) 6.;"
hypothetical protein
L3_082_090G1_scaffold_238_24
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18639..19430
DNA (792bp) protein (264aa)
Uncharacterized protein n=10 Tax=Bacteroides RepID=E1WR30_BACF6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKA87343.1}; TaxID=1073387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 615.;"
L3_082_090G1_scaffold_238_25
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19626..20630)
DNA (1005bp) protein (335aa)
Iron chelate uptake ABC transporter, FeCT family, permease protein n=11 Tax=Bacteroides RepID=D1JJU1_9BACE
putative iron(III) ABC transporter permease protein
FecCD transport family protein {ECO:0000313|EMBL:EXY91604.1}; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
L3_082_090G1_scaffold_238_26
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20627..21766)
DNA (1140bp) protein (380aa)
Iron(III) ABC transporter periplasmic iron-binding protein n=2 Tax=Bacteroides RepID=Q64X06_BACFR
iron(III) ABC transporter periplasmic iron-binding protein
Periplasmic binding family protein {ECO:0000313|EMBL:EXZ79515.1}; TaxID=1339335 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3-F-2 #6.;"
L3_082_090G1_scaffold_238_27
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22176..22289
DNA (114bp) protein (38aa)
Uncharacterized protein n=10 Tax=Bacteroides RepID=C6I4L9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDD39220.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
L3_082_090G1_scaffold_238_28
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22299..24461
DNA (2163bp) protein (721aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=C6I4L8_9BACE
putative capsule polysaccharide export protein
Putative capsule polysaccharide export protein {ECO:0000313|EMBL:BAD47972.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
L3_082_090G1_scaffold_238_29
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24469..24993
DNA (525bp) protein (175aa)
Transcription termination/antitermination factor NusG n=3 Tax=Bacteroides RepID=D1JJU5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY50383.1}; TaxID=997878 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL03T00C08.;"
putative transcriptional regulator
L3_082_090G1_scaffold_238_30
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25414..27333
DNA (1920bp) protein (640aa)
Chaperone protein DnaK n=10 Tax=Bacteroides RepID=DNAK_BACFN
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=1339283 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3996 N(B) 6.;"
dnaK2; putative chaperone protein
Displaying items 1-30 of 54 in total

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