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L3_082_090G1_scaffold_241

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Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_082_090G1_scaffold_241_1
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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1..153
DNA (153bp) protein (51aa)
ABC transporter ATP-binding protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZC48_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74929.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L3_082_090G1_scaffold_241_2
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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341..766
DNA (426bp) protein (142aa)
50S ribosomal protein L31 n=2 Tax=Collinsella RepID=A4EAB2_9ACTN
50S ribosomal protein L31 {ECO:0000256|HAMAP-Rule:MF_00501, ECO:0000256|SAAS:SAAS00004482}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
LSU ribosomal protein L31P
L3_082_090G1_scaffold_241_3
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

1074..3881
DNA (2808bp) protein (936aa)
Protein translocase subunit SecA n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAB3_9ACTN
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
protein translocase subunit secA
L3_082_090G1_scaffold_241_4
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

3881..5029
DNA (1149bp) protein (383aa)
Peptide chain release factor 2 n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAB5_9ACTN
Peptide chain release factor 2 {ECO:0000256|SAAS:SAAS00090452}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
peptide chain release factor 2 (bRF-2)
L3_082_090G1_scaffold_241_5
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

5195..6085
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAB6_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74924.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L3_082_090G1_scaffold_241_6
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

6293..7123
DNA (831bp) protein (277aa)
Transketolase, N-terminal subunit (EC:2.2.1.1)
Transketolase, thiamine diphosphate binding domain protein n=2 Tax=Collinsella RepID=A4EAB7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74923.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L3_082_090G1_scaffold_241_7
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

7125..8066
DNA (942bp) protein (314aa)
Transketolase, C-terminal subunit (EC:2.2.1.1)
Transketolase, pyridine binding domain protein n=2 Tax=Collinsella RepID=A4EAB8_9ACTN
Transketolase, pyridine binding domain protein {ECO:0000313|EMBL:EBA39441.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L3_082_090G1_scaffold_241_8
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

8518..9738
DNA (1221bp) protein (407aa)
Cell division ATP-binding protein FtsE n=1 Tax=Collinsella sp. CAG:166 RepID=R6A215_9ACTN
Cell division ATP-binding protein FtsE {ECO:0000313|EMBL:CDA35222.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
cell division ATP-binding protein FtsE
L3_082_090G1_scaffold_241_9
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

9725..10645
DNA (921bp) protein (307aa)
Cell division protein FtsX n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZLS3_9ACTN
Cell division protein FtsX {ECO:0000256|PIRNR:PIRNR003097}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
cell division protein FtsX
L3_082_090G1_scaffold_241_10
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

10781..12916
DNA (2136bp) protein (712aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
VacB and RNase II family 3'-5' exoribonuclease (EC:3.1.13.1)
Ribonuclease R n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z8L5_9ACTN
L3_082_090G1_scaffold_241_11
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

13095..13700
DNA (606bp) protein (202aa)
Resolvase, N-terminal domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAC2_9ACTN
Resolvase, N-terminal domain protein {ECO:0000313|EMBL:EBA39445.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Site-specific recombinases, DNA invertase Pin homologs
L3_082_090G1_scaffold_241_12
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

13805..14386
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z669_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA35218.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L3_082_090G1_scaffold_241_13
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

14591..15166
DNA (576bp) protein (192aa)
Transcriptional regulator, RpiR family n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAC5_9ACTN
Transcriptional regulator, RpiR family {ECO:0000313|EMBL:EBA39448.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
RpiR family transcriptional regulator
L3_082_090G1_scaffold_241_14
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

15136..15441
DNA (306bp) protein (102aa)
Transcriptional regulator RpiR family n=1 Tax=Collinsella sp. CAG:166 RepID=R6A210_9ACTN
Transcriptional regulator RpiR family {ECO:0000313|EMBL:CDA35217.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
RpiR family transcriptional regulator
L3_082_090G1_scaffold_241_15
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

15452..16375
DNA (924bp) protein (308aa)
N-acetylmuramic acid 6-phosphate etherase {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795}; Short=MurNAc-6-P etherase {ECO:0000256|HAMAP-Rule:MF_00068};; EC=4.2.1.126 {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795};; N-acetylmuramic acid 6-phosphate hydrolase {ECO:0000256|HAMAP-Rule:MF_00068}; N-acetylmuramic acid 6-phosphate lyase {ECO:0000256|HAMAP-Rule:MF_00068}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
N-acetylmuramic acid 6-phosphate etherase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAC6_9ACTN
RpiR family transcriptional regulator
L3_082_090G1_scaffold_241_16
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

16433..17863
DNA (1431bp) protein (477aa)
Protein-N(pi)-phosphohistidine--sugar phosphotransferase (EC:2.7.1.69)
Phosphotransferase system, EIIC n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAC7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74914.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L3_082_090G1_scaffold_241_17
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

17981..19033
DNA (1053bp) protein (351aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZF55_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA35214.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L3_082_090G1_scaffold_241_18
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

19126..19485
DNA (360bp) protein (120aa)
Transcriptional regulator, Spx/MgsR family n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAD0_9ACTN
Transcriptional regulator, Spx/MgsR family {ECO:0000313|EMBL:EBA39453.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L3_082_090G1_scaffold_241_19
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(19682..20092)
DNA (411bp) protein (137aa)
Uncharacterized protein n=2 Tax=Collinsella RepID=A4EAD1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA35212.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L3_082_090G1_scaffold_241_20
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

20634..21551
DNA (918bp) protein (306aa)
Tetratricopeptide repeat protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZLR4_9ACTN
Tetratricopeptide repeat protein {ECO:0000313|EMBL:CDA35211.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L3_082_090G1_scaffold_241_21
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

21541..22011
DNA (471bp) protein (157aa)
SsrA-binding protein n=2 Tax=Collinsella RepID=A4EAD4_9ACTN
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
SsrA-binding protein
L3_082_090G1_scaffold_241_22
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

22149..22721
DNA (573bp) protein (191aa)
Flavin reductase-like protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZF49_9ACTN
Flavin reductase-like protein {ECO:0000313|EMBL:CDA35209.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
flavin reductase domain-containing FMN-binding protein
L3_082_090G1_scaffold_241_23
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

22810..22953
DNA (144bp) protein (48aa)
Rubredoxin n=2 Tax=Collinsella RepID=A4EAD6_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74907.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
rubredoxin-type Fe(Cys)4 protein
L3_082_090G1_scaffold_241_24
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(23105..24361)
DNA (1257bp) protein (419aa)
Metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAD7_9ACTN
Metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family {ECO:0000313|EMBL:EBA39460.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Mn transporter
L3_082_090G1_scaffold_241_25
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

24726..29423
DNA (4698bp) protein (1566aa)
glutamate synthase [NADPH] large chain (EC:1.4.1.13)
Class II glutamine amidotransferase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAD9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74905.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L3_082_090G1_scaffold_241_26
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

29429..30910
DNA (1482bp) protein (494aa)
Pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAE1_9ACTN
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EBA39464.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
glutamate synthase, small subunit
L3_082_090G1_scaffold_241_27
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

31326..32033
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZLG2_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74903.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L3_082_090G1_scaffold_241_28
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

32394..33464
DNA (1071bp) protein (357aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:398 RepID=R6YT89_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74902.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L3_082_090G1_scaffold_241_29
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

33760..35130
DNA (1371bp) protein (457aa)
Amidohydrolase family protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAE4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74901.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
amidohydrolase
L3_082_090G1_scaffold_241_30
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(35238..35711)
DNA (474bp) protein (158aa)
Uncharacterized protein n=2 Tax=Collinsella RepID=A4EAE5_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74900.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
Displaying items 1-30 of 44 in total

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