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L3_082_090G1_scaffold_250

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_082_090G1_scaffold_250_1
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..3927)
DNA (3927bp) protein (1309aa)
Alpha-amylase {ECO:0000256|RuleBase:RU361134}; EC=3.2.1.1 {ECO:0000256|RuleBase:RU361134};; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
Alpha amylase, catalytic domain protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A6R7_BIFAD
alpha amylase
L3_082_090G1_scaffold_250_2
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4374..5021)
DNA (648bp) protein (216aa)
Low molecular weight phosphotyrosine protein phosphatase n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A6R9_BIFAD
Low molecular weight protein-tyrosine-phosphatase Wzb
Low molecular weight phosphotyrosine protein phosphatase {ECO:0000313|EMBL:EDN82502.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
L3_082_090G1_scaffold_250_3
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5100..6335)
DNA (1236bp) protein (412aa)
Fic family protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A6S0_BIFAD
bacterial regulatory protein
Regulatory protein {ECO:0000313|EMBL:KFI95042.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
L3_082_090G1_scaffold_250_4
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6542..7717)
DNA (1176bp) protein (392aa)
Endonuclease/exonuclease/phosphatase family protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A6S1_BIFAD
Endonuclease/exonuclease/phosphatase {ECO:0000313|EMBL:KFI95041.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
hypothetical protein
L3_082_090G1_scaffold_250_5
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7942..9600)
DNA (1659bp) protein (553aa)
Widely conserved hypothetical transport protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GR72_9BIFI
MFS family major facilitator transporter, multidrug:cation symporter
MFS family major facilitator transporter, multidrug:cation symporter {ECO:0000313|EMBL:AII77042.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_082_090G1_scaffold_250_6
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9721..11004)
DNA (1284bp) protein (428aa)
Metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A6S5_BIFAD
H(+)-stimulated manganese uptake system protein {ECO:0000313|EMBL:KFI95038.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
H(+)-stimulated manganese uptake system protein
L3_082_090G1_scaffold_250_7
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11170..12024
DNA (855bp) protein (285aa)
Dehydrogenase or reductase protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GZT9_9BIFI
2,5-diketo-D-gluconate reductase
2,5-diketo-D-gluconate reductase {ECO:0000313|EMBL:AII77040.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_082_090G1_scaffold_250_8
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12041..12793
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A395_BIFAA
extracellular deoxyribonuclease
Extracellular deoxyribonuclease {ECO:0000313|EMBL:AII77039.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_082_090G1_scaffold_250_9
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13138..14211)
DNA (1074bp) protein (358aa)
LacI-type transcriptional regulator n=3 Tax=Bifidobacterium RepID=A1A398_BIFAA
LacI-type transcriptional regulator
LacI-type transcriptional regulator {ECO:0000313|EMBL:AII77038.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_082_090G1_scaffold_250_10
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14256..16352)
DNA (2097bp) protein (699aa)
Beta-galactosidase {ECO:0000256|PIRNR:PIRNR001084}; Short=Beta-gal {ECO:0000256|PIRNR:PIRNR001084};; EC=3.2.1.23 {ECO:0000256|PIRNR:PIRNR001084};; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
beta-galactosidase I n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=UPI0000E9B444
Beta-galactosidase BgaB
L3_082_090G1_scaffold_250_11
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16404..17390)
DNA (987bp) protein (329aa)
ABC transporter, permease protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BPY2_9BIFI
ABC transporter permease
ABC transporter permease {ECO:0000313|EMBL:AII77036.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_082_090G1_scaffold_250_12
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17476..18411)
DNA (936bp) protein (312aa)
Permease protein of ABC transporter system for sugars n=2 Tax=Bifidobacterium dentium RepID=D2Q6C5_BIFDB
ABC transporter, permease protein
ABC transporter, permease protein {ECO:0000313|EMBL:AII77035.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_082_090G1_scaffold_250_13
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18592..19950)
DNA (1359bp) protein (453aa)
ABC transporter, solute-binding protein n=2 Tax=Bifidobacterium dentium RepID=E0Q4I6_9BIFI
sugar ABC superfamily ATP binding cassette transporter, binding protein
Sugar ABC superfamily ATP binding cassette transporter, binding protein {ECO:0000313|EMBL:AII77034.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_082_090G1_scaffold_250_14
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20622..21314)
DNA (693bp) protein (231aa)
Pyridoxal 5'-phosphate synthase subunit PdxT {ECO:0000256|HAMAP-Rule:MF_01615}; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01615};; Pdx2 {ECO:0000256|HAMAP-Rule:MF_01615}; Pyridoxal 5'-phosphate synthase glutaminase subunit {ECO:0000256|HAMAP-Rule:MF_01615}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
glutamine amidotransferase n=1 Tax=Bifidobacterium adolescentis RepID=UPI00006DD88A
glutamine amidotransferase subunit PdxT
L3_082_090G1_scaffold_250_15
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21402..22277)
DNA (876bp) protein (292aa)
Pyridoxal 5'-phosphate synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824}; Short=PLP synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824};; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01824};; Pdx1 {ECO:0000256|HAMAP-Rule:MF_01824}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
Pyridoxal biosynthesis lyase PdxS n=2 Tax=Bifidobacterium RepID=C0BV13_9BIFI
pyridoxal biosynthesis lyase PdxS
L3_082_090G1_scaffold_250_16
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22701..26777)
DNA (4077bp) protein (1359aa)
ABC transporter, ATP-binding protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A6U2_BIFAD
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDN82526.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
ATP binding protein of ABC transporter
L3_082_090G1_scaffold_250_17
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27364..29187
DNA (1824bp) protein (608aa)
Probable long-chain-fatty acid CoA ligase n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A3A7_BIFAA
AMP-binding protein {ECO:0000313|EMBL:KIM01126.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
long-chain-fatty acid CoA ligase
L3_082_090G1_scaffold_250_18
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29379..30893)
DNA (1515bp) protein (505aa)
L-arabinose isomerase {ECO:0000256|HAMAP-Rule:MF_00519, ECO:0000256|SAAS:SAAS00008909}; EC=5.3.1.4 {ECO:0000256|HAMAP-Rule:MF_00519, ECO:0000256|SAAS:SAAS00008909};; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L-arabinose isomerase n=3 Tax=Bifidobacterium RepID=ARAA_BIFAA
L-arabinose isomerase
L3_082_090G1_scaffold_250_19
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30947..31639)
DNA (693bp) protein (231aa)
L-ribulose-5-phosphate 4-epimerase n=3 Tax=Bifidobacterium RepID=A1A3A9_BIFAA
L-ribulose-5-phosphate 4-epimerase
L-ribulose-5-phosphate 4-epimerase {ECO:0000313|EMBL:CCY20539.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
L3_082_090G1_scaffold_250_20
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31683..33305)
DNA (1623bp) protein (541aa)
Probable sugar kinase n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A3B0_BIFAA
Probable sugar kinase {ECO:0000313|EMBL:BAF40193.1}; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
sugar kinase
L3_082_090G1_scaffold_250_21
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33470..34549)
DNA (1080bp) protein (360aa)
Transcriptional regulator, LacI family n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A6U9_BIFAD
Transcriptional regulator, LacI family {ECO:0000313|EMBL:EDN82532.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
LacI-type transcriptional regulator
L3_082_090G1_scaffold_250_22
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34699..36126)
DNA (1428bp) protein (476aa)
Septum formation protein Maf n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A6V0_BIFAD
Septum formation protein Maf {ECO:0000313|EMBL:EDN82533.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
hypothetical protein
L3_082_090G1_scaffold_250_23
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(36123..37127)
DNA (1005bp) protein (335aa)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00129832}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00129832};; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
Homoserine kinase n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A3B3_BIFAA
thrB; homoserine kinase
L3_082_090G1_scaffold_250_24
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(37299..38615)
DNA (1317bp) protein (439aa)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
Homoserine dehydrogenase n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A3B4_BIFAA
homoserine dehydrogenase
L3_082_090G1_scaffold_250_25
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(38774..40372)
DNA (1599bp) protein (533aa)
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120};; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
Diaminopimelate decarboxylase n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A6V4_BIFAD
diaminopimelate decarboxylase
L3_082_090G1_scaffold_250_26
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(40395..42233)
DNA (1839bp) protein (613aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
Arginine--tRNA ligase n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A6V5_BIFAD
arginyl-tRNA synthetase
L3_082_090G1_scaffold_250_27
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(42217..43701)
DNA (1485bp) protein (495aa)
Amino acid permease n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A6V6_BIFAD
amino acid permease
Amino acid permease {ECO:0000313|EMBL:AJE06499.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_082_090G1_scaffold_250_28
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(43963..44352)
DNA (390bp) protein (130aa)
Putative endoribonuclease L-PSP n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A6V8_BIFAD
Putative translational inhibitor protein {ECO:0000313|EMBL:KFI95018.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
putative 14.5 kDa translational inhibitor protein
L3_082_090G1_scaffold_250_29
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(44849..45817)
DNA (969bp) protein (323aa)
Uncharacterized protein n=3 Tax=Bifidobacterium RepID=A1A3B9_BIFAA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJE06501.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_082_090G1_scaffold_250_30
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(45950..46948)
DNA (999bp) protein (333aa)
Uncharacterized protein n=2 Tax=Bifidobacterium adolescentis RepID=A1A3C0_BIFAA
hypothetical protein
Putative lipoprotein {ECO:0000313|EMBL:AII77017.1}; Uncharacterized protein {ECO:0000313|EMBL:AJE06502.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
Displaying items 1-30 of 41 in total

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