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L3_082_090G1_scaffold_253

Search features with annotation key words

Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_082_090G1_scaffold_253_1
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(575..1540)
DNA (966bp) protein (322aa)
TPR-domain containing protein n=2 Tax=Parabacteroides RepID=A6LFD6_PARD8
SHNi-TPR family protein {ECO:0000313|EMBL:KDS73832.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
hypothetical protein
L3_082_090G1_scaffold_253_2
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1873..2127
DNA (255bp) protein (85aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K5ZHY5_9PORP
oxaloacetate decarboxylase subunit gamma 1
Oxaloacetate decarboxylase, gamma chain family protein {ECO:0000313|EMBL:KDS73833.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_082_090G1_scaffold_253_3
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2146..4071
DNA (1926bp) protein (642aa)
Biotin-requiring enzyme n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TFX6_9BACE
Pyruvate carboxylase subunit B {ECO:0000313|EMBL:KEJ84542.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
pyruvate carboxylase subunit B
L3_082_090G1_scaffold_253_4
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4071..5306
DNA (1236bp) protein (412aa)
Oxaloacetate decarboxylase beta chain n=2 Tax=Parabacteroides RepID=A6LFD9_PARD8
Sodium ion-translocating decarboxylase, beta subunit {ECO:0000313|EMBL:KDS73835.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
oxaloacetate decarboxylase subunit beta
L3_082_090G1_scaffold_253_5
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5524..7377
DNA (1854bp) protein (618aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) RepID=A6LFE0_PARD8
Uncharacterized protein {ECO:0000313|EMBL:KEJ84540.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
hypothetical protein
L3_082_090G1_scaffold_253_6
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7441..8649
DNA (1209bp) protein (403aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=C7XDX1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEY83003.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
hypothetical protein
L3_082_090G1_scaffold_253_7
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8715..9908
DNA (1194bp) protein (398aa)
Isoamylase N-terminal domain protein n=4 Tax=Bacteroidales RepID=C7XDX2_9PORP
glycosylhydrolase
Isoamylase N-terminal domain protein {ECO:0000313|EMBL:EEU50075.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_082_090G1_scaffold_253_8
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9974..10669)
DNA (696bp) protein (232aa)
Two-component system response regulator protein n=5 Tax=Bacteroidales RepID=A6LFE3_PARD8
two-component system response regulator
Uncharacterized protein {ECO:0000313|EMBL:EKN24542.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
L3_082_090G1_scaffold_253_9
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10666..11724)
DNA (1059bp) protein (353aa)
Histidine kinase superfamily n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IUI9_9BACE
Histidine kinase superfamily {ECO:0000313|EMBL:EFI07567.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
two-component system sensor histidine kinase
L3_082_090G1_scaffold_253_10
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11745..13904)
DNA (2160bp) protein (720aa)
TonB-dependent receptor n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IUI8_9BACE
TonB-dependent receptor {ECO:0000313|EMBL:EFI07566.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
hypothetical protein
L3_082_090G1_scaffold_253_11
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14737..14934
DNA (198bp) protein (66aa)
Uncharacterized protein n=5 Tax=Bacteroidales RepID=C7XDX6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEU50079.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_082_090G1_scaffold_253_12
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14938..15210
DNA (273bp) protein (91aa)
Uncharacterized protein n=6 Tax=Bacteroidales RepID=A6LFE7_PARD8
hypothetical protein
Addiction module toxin, RelE/StbE family protein {ECO:0000313|EMBL:KDS73844.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_082_090G1_scaffold_253_13
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15215..15805)
DNA (591bp) protein (197aa)
folE; GTP cyclohydrolase I (EC:3.5.4.16)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|HAMAP-Rule:MF_00223}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
GTP cyclohydrolase 1 n=2 Tax=Parabacteroides distasonis RepID=GCH1_PARD8
L3_082_090G1_scaffold_253_14
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15811..16317)
DNA (507bp) protein (169aa)
Uncharacterized protein n=5 Tax=Parabacteroides RepID=A6LFE9_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFK61799.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
L3_082_090G1_scaffold_253_15
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16388..17143)
DNA (756bp) protein (252aa)
tpiA; triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
Triosephosphate isomerase n=3 Tax=Parabacteroides RepID=TPIS_PARD8
L3_082_090G1_scaffold_253_16
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17180..18463)
DNA (1284bp) protein (428aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A6LFF1_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDB49114.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
L3_082_090G1_scaffold_253_17
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18469..19014)
DNA (546bp) protein (182aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A6LFF2_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEJ84528.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
L3_082_090G1_scaffold_253_18
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19173..20423)
DNA (1251bp) protein (417aa)
Peptidase, M23/M37 family n=2 Tax=Bacteroidales RepID=A6LFF3_PARD8
M24/M37 family peptidase
Peptidase, M23/M37 family {ECO:0000313|EMBL:ABR44417.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_082_090G1_scaffold_253_19
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20634..22730)
DNA (2097bp) protein (699aa)
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:EEU50087.1}; EC=3.6.1.- {ECO:0000313|EMBL:EEU50087.1};; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
ATP-dependent DNA helicase RecG n=5 Tax=Bacteroidales RepID=A6LFF4_PARD8
ATP-dependent DNA helicase RecG
L3_082_090G1_scaffold_253_20
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22753..23451)
DNA (699bp) protein (233aa)
ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC:2.7.7.60)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108};; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000256|HAMAP-Rule:MF_00108}; MEP cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=3 Tax=Parabacteroides RepID=A6LFF5_PARD8
L3_082_090G1_scaffold_253_21
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23451..23648)
DNA (198bp) protein (66aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|SAAS:SAAS00198686};; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
Uncharacterized protein n=9 Tax=Bacteroidales RepID=A6LFF6_PARD8
hypothetical protein
L3_082_090G1_scaffold_253_22
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23688..25022)
DNA (1335bp) protein (445aa)
xseA; exodeoxyribonuclease VII large subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
Exodeoxyribonuclease 7 large subunit n=2 Tax=Parabacteroides RepID=A6LFF7_PARD8
L3_082_090G1_scaffold_253_23
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25003..26385)
DNA (1383bp) protein (461aa)
Uncharacterized protein n=2 Tax=Parabacteroides distasonis RepID=K6A448_9PORP
subtilase family serine protease
Uncharacterized protein {ECO:0000313|EMBL:KEJ84522.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
L3_082_090G1_scaffold_253_24
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26487..26954)
DNA (468bp) protein (156aa)
Transcriptional regulator n=9 Tax=Bacteroidales RepID=A6LFF9_PARD8
transcriptional regulator
Putative regulatory protein AsnC {ECO:0000313|EMBL:EEY83021.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
L3_082_090G1_scaffold_253_25
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27139..27849)
DNA (711bp) protein (237aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
Peptidyl-prolyl cis-trans isomerase n=9 Tax=Bacteroidales RepID=A6LFG0_PARD8
FKBP-type peptidyl-prolyl cis-trans isomerase
L3_082_090G1_scaffold_253_26
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27870..28457)
DNA (588bp) protein (196aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915, ECO:0000256|RuleBase:RU004231}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
Peptidyl-prolyl cis-trans isomerase n=3 Tax=Parabacteroides RepID=A6LFG1_PARD8
FKBP-type peptidyl-prolyl cis-trans isomerase
L3_082_090G1_scaffold_253_27
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28591..30753)
DNA (2163bp) protein (721aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D13 RepID=C7XDZ2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEU50095.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
hypothetical protein
L3_082_090G1_scaffold_253_28
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30943..32334
DNA (1392bp) protein (464aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=C7XDZ3_9PORP
outer membrane protein
Putative outer membrane protein {ECO:0000313|EMBL:ABR44427.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_082_090G1_scaffold_253_29
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32371..33273
DNA (903bp) protein (301aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=A6LFG4_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEU50097.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_082_090G1_scaffold_253_30
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33354..34043
DNA (690bp) protein (230aa)
NAD-dependent protein deacylase {ECO:0000256|HAMAP-Rule:MF_01121}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_01121};; Regulatory protein SIR2 homolog {ECO:0000256|HAMAP-Rule:MF_01121}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
NAD-dependent protein deacylase n=2 Tax=Parabacteroides RepID=A6LFG5_PARD8
NAD-dependent deacetylase
Displaying items 1-30 of 55 in total

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