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L3_082_090G1_scaffold_261

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Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_082_090G1_scaffold_261_1
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(278..1285)
DNA (1008bp) protein (336aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BSN9_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN45831.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
transcriptional regulator, LacI family
L3_082_090G1_scaffold_261_2
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1506..2906
DNA (1401bp) protein (467aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7B420_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN77388.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
L3_082_090G1_scaffold_261_3
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2923..3747
DNA (825bp) protein (275aa)
transketolase subunit A (EC:2.2.1.1)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BQN4_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD17473.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L3_082_090G1_scaffold_261_4
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3747..4691
DNA (945bp) protein (315aa)
transketolase subunit B (EC:2.2.1.1)
Transketolase, C-terminal domain protein n=3 Tax=Lachnospiraceae RepID=A7B418_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD17474.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L3_082_090G1_scaffold_261_5
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4710..6188
DNA (1479bp) protein (493aa)
glpK3; glycerol kinase 1 (EC:2.7.1.30)
Glycerol kinase n=3 Tax=Lachnospiraceae RepID=V8BRQ3_RUMGN
Putative glycerol kinase {ECO:0000313|EMBL:EDN77385.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
L3_082_090G1_scaffold_261_6
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6426..7772
DNA (1347bp) protein (449aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=V8BRU4_RUMGN
Putative ATP synthase F0, A subunit {ECO:0000313|EMBL:EDN77383.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
putative efflux protein, MATE family
L3_082_090G1_scaffold_261_7
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8130..9239)
DNA (1110bp) protein (370aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=A7B414_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN77382.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
L3_082_090G1_scaffold_261_8
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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9445..11400
DNA (1956bp) protein (652aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0048 RepID=S2YNM0_9FIRM
LytS2; ATPase
L3_082_090G1_scaffold_261_9
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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11375..12898
DNA (1524bp) protein (508aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0048 RepID=S2Z7J1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD65977.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
hypothetical protein
L3_082_090G1_scaffold_261_10
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12950..14302)
DNA (1353bp) protein (451aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_37FAA RepID=E9RVA0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC74910.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
hypothetical protein
L3_082_090G1_scaffold_261_11
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14529..15434
DNA (906bp) protein (302aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3ALE2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG86308.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
ABC transporter permease
L3_082_090G1_scaffold_261_12
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15446..16801
DNA (1356bp) protein (452aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=S2YLM7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG86307.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
binding-protein-dependent transport system inner membrane protein
L3_082_090G1_scaffold_261_13
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16825..18069
DNA (1245bp) protein (415aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3ALE0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG86306.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
beta-glucanase
L3_082_090G1_scaffold_261_14
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18089..19375
DNA (1287bp) protein (429aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3ALS8_9FIRM
Oxidoreductase {ECO:0000313|EMBL:KEZ88257.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
oxidoreductase domain-containing protein
L3_082_090G1_scaffold_261_15
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19381..21018
DNA (1638bp) protein (546aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_37FAA RepID=E9RV96_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC74906.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
hypothetical protein
L3_082_090G1_scaffold_261_16
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21418..21528
DNA (111bp) protein (37aa)
Transposase, IS4 family n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C227_9CLOT
Transposase, IS4 family {ECO:0000313|EMBL:EEG74190.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
Transposase and inactivated derivatives
L3_082_090G1_scaffold_261_17

Not on your lists

21646..22458
DNA (813bp) protein (271aa)
Transposase, IS4 family (Fragment) n=2 Tax=human gut metagenome RepID=K1UNP5_9ZZZZ
Transposase, IS4 family {ECO:0000313|EMBL:EKC79795.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Transposase and inactivated derivatives
L3_082_090G1_scaffold_261_18
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22606..23898
DNA (1293bp) protein (431aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UGJ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN45822.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L3_082_090G1_scaffold_261_19
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23900..25174)
DNA (1275bp) protein (425aa)
M18 family aminopeptidase {ECO:0000256|RuleBase:RU004387}; EC=3.4.11.- {ECO:0000256|RuleBase:RU004387};; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Aspartyl aminopeptidase (EC:3.4.11.-)
M18 family aminopeptidase n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5U9S5_9FIRM
L3_082_090G1_scaffold_261_20
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25302..25976
DNA (675bp) protein (225aa)
Response regulator receiver domain protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TQF5_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:CCZ67920.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
DNA-binding response regulator
L3_082_090G1_scaffold_261_21
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25973..27346
DNA (1374bp) protein (458aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=3 Tax=Lachnospiraceae RepID=A7B3W2_RUMGN
Sensor protein basS/pmrB
L3_082_090G1_scaffold_261_22
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27375..27938)
DNA (564bp) protein (188aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=R0C656_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ52052.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
serine protease
L3_082_090G1_scaffold_261_23
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28401..28997
DNA (597bp) protein (199aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BQY6_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN45818.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L3_082_090G1_scaffold_261_24
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29016..29489
DNA (474bp) protein (158aa)
Hydrolase, NUDIX family n=4 Tax=Clostridiales RepID=A7B3W0_RUMGN
Hydrolase NUDIX family {ECO:0000313|EMBL:CCZ67917.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Isopentenyldiphosphate isomerase
L3_082_090G1_scaffold_261_25
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29486..30142)
DNA (657bp) protein (219aa)
Channel protein, hemolysin III family n=4 Tax=Clostridiales RepID=A7B3V9_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN45816.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
channel protein, hemolysin III family
L3_082_090G1_scaffold_261_26
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30365..31948
DNA (1584bp) protein (528aa)
DEAD/DEAH box helicase n=4 Tax=Clostridiales RepID=A7B3V8_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN45815.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Superfamily II DNA and RNA helicases
L3_082_090G1_scaffold_261_27
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32045..32659
DNA (615bp) protein (205aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7B3V7_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN77325.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
L3_082_090G1_scaffold_261_28
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(32718..34964)
DNA (2247bp) protein (749aa)
lacZ1; beta-galactosidase LacZ (EC:3.2.1.23)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6S6B0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC42207.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
L3_082_090G1_scaffold_261_29
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34984..36390)
DNA (1407bp) protein (469aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=R6EB57_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA97095.1}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
sugar/sodium symporter
L3_082_090G1_scaffold_261_30
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(36469..37455)
DNA (987bp) protein (329aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6S6B4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC42212.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
hypothetical protein
Displaying items 1-30 of 50 in total

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