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L3_082_090G1_scaffold_264

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_082_090G1_scaffold_264_1
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2..1606)
DNA (1605bp) protein (535aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0003096A8A
Uncharacterized protein {ECO:0000313|EMBL:EES78702.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_082_090G1_scaffold_264_2
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1632..1796)
DNA (165bp) protein (55aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I0Y3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY34019.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
L3_082_090G1_scaffold_264_3
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2142..4916)
DNA (2775bp) protein (925aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TQ90_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67938.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L3_082_090G1_scaffold_264_4
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5520..5609)
DNA (90bp) protein (30aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BM83_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD15581.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L3_082_090G1_scaffold_264_5
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6044..6961
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CC55_001C RepID=V8BKD2_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD15579.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
hypothetical protein
L3_082_090G1_scaffold_264_6
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(7041..8942)
DNA (1902bp) protein (634aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01228}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TNJ7_9FIRM
L3_082_090G1_scaffold_264_7
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9352..9873)
DNA (522bp) protein (174aa)
HTH domain protein n=4 Tax=Clostridiales RepID=A7B891_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD15576.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
Predicted small molecule binding protein (contains 3H domain)
L3_082_090G1_scaffold_264_8
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9907..10761)
DNA (855bp) protein (285aa)
nicotinate-nucleotide pyrophosphorylase (EC:2.4.2.19)
Nicotinate-nucleotide diphosphorylase n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5U890_9FIRM
Nicotinate-nucleotide diphosphorylase {ECO:0000313|EMBL:CCZ67356.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L3_082_090G1_scaffold_264_9
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10798..11985)
DNA (1188bp) protein (396aa)
Aspartate oxidase (EC:1.4.3.16)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TNW4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67355.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L3_082_090G1_scaffold_264_10
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12032..12937)
DNA (906bp) protein (302aa)
Quinolinate synthase {ECO:0000256|SAAS:SAAS00096027}; EC=2.5.1.72 {ECO:0000256|SAAS:SAAS00096027};; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Quinolinate synthetase complex A subunit n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TVL5_9FIRM
quinolinate synthetase A
L3_082_090G1_scaffold_264_11
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13092..13847)
DNA (756bp) protein (252aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7B887_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN43337.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L3_082_090G1_scaffold_264_12
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13892..14578)
DNA (687bp) protein (229aa)
ABC transporter, ATP-binding protein n=4 Tax=Clostridiales RepID=A7B886_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN43338.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
ABC-type multidrug transport system, ATPase component
L3_082_090G1_scaffold_264_13
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14575..14937)
DNA (363bp) protein (121aa)
Transcriptional regulator GntR family n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5U886_9FIRM
Transcriptional regulator GntR family {ECO:0000313|EMBL:CCZ67351.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
transcriptional regulator, GntR family
L3_082_090G1_scaffold_264_14
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15094..16059)
DNA (966bp) protein (322aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BKC4_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN43340.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
nagK; hyaluronidase
L3_082_090G1_scaffold_264_15
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16077..21206)
DNA (5130bp) protein (1710aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_58FAA RepID=F7K1R4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN43341.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
coagulation factor 5/8 type domain-containing protein
L3_082_090G1_scaffold_264_16
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21326..22294)
DNA (969bp) protein (323aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BLB2_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN43342.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L3_082_090G1_scaffold_264_17
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22270..22839)
DNA (570bp) protein (190aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Phosphodiesterase family protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B881_RUMGN
phosphoesterase, MJ0936 family
L3_082_090G1_scaffold_264_18
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22869..24128)
DNA (1260bp) protein (420aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B880_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN75862.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Uncharacterized protein conserved in bacteria C-term(DUF2220).
L3_082_090G1_scaffold_264_19
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24125..27481)
DNA (3357bp) protein (1119aa)
RecF/RecN/SMC N-terminal domain protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UEP1_9FIRM
RecF/RecN/SMC N-terminal domain protein {ECO:0000313|EMBL:CCZ67347.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
SMC domain-containing protein
L3_082_090G1_scaffold_264_20
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27432..28076)
DNA (645bp) protein (215aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7B878_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD15563.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
hypothetical protein
L3_082_090G1_scaffold_264_21
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28073..29518)
DNA (1446bp) protein (482aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B877_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN43347.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L3_082_090G1_scaffold_264_22
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29624..31183)
DNA (1560bp) protein (520aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7B876_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD15561.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
Na+/melibiose symporter and related transporters
L3_082_090G1_scaffold_264_23
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31326..33263)
DNA (1938bp) protein (646aa)
Beta-galactosidase/beta-glucuronidase (EC:3.2.1.23)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=V8BL87_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD15560.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L3_082_090G1_scaffold_264_24
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33442..34734)
DNA (1293bp) protein (431aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UEN5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67342.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L3_082_090G1_scaffold_264_25
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34759..35457)
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5U875_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67341.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Response regulator of the LytR/AlgR family
L3_082_090G1_scaffold_264_26
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35801..36580
DNA (780bp) protein (260aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BM63_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN43353.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
HD domain.
L3_082_090G1_scaffold_264_27
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36588..37199)
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UEM8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67337.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
nucleoside recognition domain containing protein
L3_082_090G1_scaffold_264_28
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37203..38957)
DNA (1755bp) protein (585aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5U870_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67336.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L3_082_090G1_scaffold_264_29
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

39065..39595
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TNU7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67335.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Uncharacterized membrane protein
L3_082_090G1_scaffold_264_30
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

39652..40311
DNA (660bp) protein (220aa)
ABC transporter ATP-binding protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TVK1_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CCZ67334.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
carbohydrate ABC transporter ATP-binding protein, CUT1 family (TC 3.A.1.1.-)
Displaying items 1-30 of 43 in total

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