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L3_082_090G1_scaffold_290

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Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_082_090G1_scaffold_290_1
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(72..233)
DNA (162bp) protein (54aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HLG7_BACVU
Uncharacterized protein {ECO:0000313|EMBL:KDS32400.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
glycosyltransferase
L3_082_090G1_scaffold_290_2
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(915..3383)
DNA (2469bp) protein (823aa)
Ferrous iron transporter B n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HLE2_BACVU
Ferrous iron transporter B {ECO:0000313|EMBL:EOS04873.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
iron transport, fusion membrane protein
L3_082_090G1_scaffold_290_3
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3504..4808
DNA (1305bp) protein (435aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
tRNA(Ile)-lysidine synthase n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HLQ9_BACVU
tRNA(Ile)-lysidine synthetase
L3_082_090G1_scaffold_290_4
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4947..6647)
DNA (1701bp) protein (567aa)
Tetratricopeptide repeat protein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V9F4_BACVU
Tetratricopeptide repeat family protein {ECO:0000313|EMBL:KDS32404.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
hypothetical protein
L3_082_090G1_scaffold_290_5
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6684..7451)
DNA (768bp) protein (256aa)
RNA methyltransferase, TrmH family, group 3 n=2 Tax=Bacteroides vulgatus RepID=D4V9F5_BACVU
RNA methyltransferase, TrmH family, group 3 {ECO:0000313|EMBL:EOS04876.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
tRNA/rRNA methyltransferase
L3_082_090G1_scaffold_290_6
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7502..9163)
DNA (1662bp) protein (554aa)
DNA repair protein RecN n=6 Tax=Bacteroides RepID=A6L4B6_BACV8
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
DNA repair protein recN
L3_082_090G1_scaffold_290_7
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9279..10475)
DNA (1197bp) protein (399aa)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase {ECO:0000313|EMBL:EET17388.2}; EC=4.1.1.36 {ECO:0000313|EMBL:EET17388.2};; EC=6.3.2.5 {ECO:0000313|EMBL:EET17388.2};; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase n=5 Tax=root RepID=C6Z929_9BACE
flavoprotein
L3_082_090G1_scaffold_290_8
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10472..11248)
DNA (777bp) protein (259aa)
DNA Pol III epsilon chain n=13 Tax=Bacteroides RepID=A6L4B8_BACV8
DNA polymerase III subunit epsilon
Exonuclease family protein {ECO:0000313|EMBL:KDS45071.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L3_082_090G1_scaffold_290_9
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11300..12424)
DNA (1125bp) protein (375aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
DNA polymerase III subunit beta n=7 Tax=Bacteroides RepID=A6L4B9_BACV8
DNA polymerase III subunit beta
L3_082_090G1_scaffold_290_10
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12578..12955
DNA (378bp) protein (126aa)
Uncharacterized protein n=10 Tax=Bacteroides RepID=A6L4C0_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEO44065.1}; TaxID=556260 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei 5_1_36/D4.;"
L3_082_090G1_scaffold_290_11
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13555..14241)
DNA (687bp) protein (229aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I8WQZ9_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EEB23046.1}; TaxID=483217 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei DSM 17855.;"
transposase
L3_082_090G1_scaffold_290_12
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14319..14549)
DNA (231bp) protein (77aa)
Uncharacterized protein n=2 Tax=Bacteroides dorei RepID=I9G3X9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY41044.1}; TaxID=997877 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei CL03T12C01.;"
transposase
L3_082_090G1_scaffold_290_13
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15189..15383)
DNA (195bp) protein (65aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=C3R4U6_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EEB23048.1}; TaxID=483217 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei DSM 17855.;"
L3_082_090G1_scaffold_290_14
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15636..17048)
DNA (1413bp) protein (471aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=C3R4U5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY41042.1}; TaxID=997877 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei CL03T12C01.;"
hypothetical protein
L3_082_090G1_scaffold_290_15
Bacteroides sp. 9_1_42FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17068..17892)
DNA (825bp) protein (275aa)
Starch synthase catalytic domain protein n=5 Tax=Bacteroides RepID=C3Q091_9BACE
glycogen synthase
Starch synthase catalytic domain protein {ECO:0000313|EMBL:EEO61183.1}; TaxID=457395 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 9_1_42FAA.;"
L3_082_090G1_scaffold_290_16
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18244..19092
DNA (849bp) protein (283aa)
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158};; Pantoate--beta-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00158}; Pantoate-activating enzyme {ECO:0000256|HAMAP-Rule:MF_00158}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
Pantothenate synthetase n=12 Tax=Bacteroides RepID=PANC_BACV8
pantoate--beta-alanine ligase
L3_082_090G1_scaffold_290_17
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19114..19464
DNA (351bp) protein (117aa)
Aspartate 1-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097809}; EC=4.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097718};; Aspartate alpha-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
Aspartate 1-decarboxylase n=14 Tax=Bacteroides RepID=PAND_BACV8
aspartate decarboxylase
L3_082_090G1_scaffold_290_18
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19594..21594)
DNA (2001bp) protein (667aa)
Fructose-1,6-bisphosphatase class 3 {ECO:0000256|HAMAP-Rule:MF_01854}; Short=FBPase class 3 {ECO:0000256|HAMAP-Rule:MF_01854};; EC=3.1.3.11 {ECO:0000256|HAMAP-Rule:MF_01854};; D-fructose-1,6-bisphosphate 1-phosphohydrolase class 3 {ECO:0000256|HAMAP-Rule:MF_01854}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
Fructose-1,6-bisphosphatase class 3 n=4 Tax=Bacteroides RepID=C6Z920_9BACE
fructose-1,6-bisphosphatase
L3_082_090G1_scaffold_290_19
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21604..23265)
DNA (1662bp) protein (554aa)
TrkA C-terminal domain protein n=5 Tax=Bacteroides RepID=C6Z919_9BACE
Membrane protein {ECO:0000313|EMBL:EFV68567.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
hypothetical protein
L3_082_090G1_scaffold_290_20
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23342..24139)
DNA (798bp) protein (266aa)
Hydrolase, NUDIX family n=2 Tax=Bacteroides vulgatus RepID=D4VB20_BACVU
NUDIX domain protein {ECO:0000313|EMBL:KDS45062.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
NADH pyrophosphatase
L3_082_090G1_scaffold_290_21
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24162..26291)
DNA (2130bp) protein (710aa)
S1 RNA binding domain protein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4VB19_BACVU
S1 RNA binding domain protein {ECO:0000313|EMBL:EFG16956.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
RNA-binding protein
L3_082_090G1_scaffold_290_22
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26651..27460
DNA (810bp) protein (270aa)
Putative uncharacterized protein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4VB18_BACVU
Putative uncharacterized protein {ECO:0000313|EMBL:EFG16955.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
hypothetical protein
L3_082_090G1_scaffold_290_23
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27776..28738)
DNA (963bp) protein (321aa)
Abi-like protein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4VB17_BACVU
Abi-like protein {ECO:0000313|EMBL:EFG16954.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
hypothetical protein
L3_082_090G1_scaffold_290_24
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30001..32625
DNA (2625bp) protein (875aa)
Beta-galactosidase n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HLT3_BACVU
Beta-galactosidase {ECO:0000313|EMBL:EOS04899.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
glycoside hydrolase
L3_082_090G1_scaffold_290_25
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32751..37154
DNA (4404bp) protein (1468aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I9UMA9_BACVU
Response regulator {ECO:0000313|EMBL:KDS45055.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
two-component system sensor histidine kinase/response regulator, hybrid
L3_082_090G1_scaffold_290_26
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37319..38203
DNA (885bp) protein (295aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A6L4D7_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDF17627.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L3_082_090G1_scaffold_290_27
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38233..41688
DNA (3456bp) protein (1152aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HLJ4_BACVU
TonB-linked outer membrane , SusC/RagA family protein {ECO:0000313|EMBL:KDS45053.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
hypothetical protein
L3_082_090G1_scaffold_290_28
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

41709..43718
DNA (2010bp) protein (670aa)
SusD family protein n=6 Tax=root RepID=C6Z907_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOS04903.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
hypothetical protein
L3_082_090G1_scaffold_290_29
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

43887..45620
DNA (1734bp) protein (578aa)
Polysaccharide lyase family 1, candidate pectate lyase n=6 Tax=Bacteroides RepID=A6L4E0_BACV8
Uncharacterized protein {ECO:0000313|EMBL:EOS04904.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
polysaccharide lyase 1, pectate lyase
L3_082_090G1_scaffold_290_30
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

45681..46313
DNA (633bp) protein (211aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=A6L4E1_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDS45050.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
Displaying items 1-30 of 42 in total

View Taxonomy