ggKbase home page

L3_082_090G1_scaffold_307

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_082_090G1_scaffold_307_1
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

496..1386
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E7Q7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72478.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L3_082_090G1_scaffold_307_2
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

1450..2067
DNA (618bp) protein (206aa)
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z9D0_9ACTN
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|RuleBase:RU003567}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
protease subunit of ATP-dependent protease
L3_082_090G1_scaffold_307_3
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

2060..3526
DNA (1467bp) protein (489aa)
Conserved domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E7Q9_9ACTN
Conserved domain protein {ECO:0000313|EMBL:EBA40768.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
type IV secretory pathway, VirD4 component
L3_082_090G1_scaffold_307_4
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(3505..5199)
DNA (1695bp) protein (565aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E7R0_9ACTN
L3_082_090G1_scaffold_307_5
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(5399..5971)
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E7R1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA40771.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L3_082_090G1_scaffold_307_6
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

6141..7646
DNA (1506bp) protein (502aa)
DNA-directed DNA polymerase (EC:2.7.7.7)
ImpB/MucB/SamB family protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZMA0_9ACTN
ImpB/MucB/SamB family protein {ECO:0000313|EMBL:CDA35441.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L3_082_090G1_scaffold_307_7
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

7639..8064
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z9C5_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA35440.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L3_082_090G1_scaffold_307_8
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(8061..9572)
DNA (1512bp) protein (504aa)
LPXTG-motif cell wall anchor domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E7R5_9ACTN
LPXTG-motif cell wall anchor domain protein {ECO:0000313|EMBL:EBA40774.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L3_082_090G1_scaffold_307_9
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(9580..10590)
DNA (1011bp) protein (337aa)
LPXTG-motif cell wall anchor domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E7R5_9ACTN
LPXTG-motif cell wall anchor domain protein {ECO:0000313|EMBL:EBA40774.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L3_082_090G1_scaffold_307_10
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(10913..11296)
DNA (384bp) protein (128aa)
Heavy metal-associated domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZFU7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72487.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
heavy metal transport/detoxification protein
L3_082_090G1_scaffold_307_11
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

11470..12174
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z6V5_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72488.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L3_082_090G1_scaffold_307_12
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

12221..12640
DNA (420bp) protein (140aa)
Flavodoxin n=1 Tax=Collinsella sp. CAG:166 RepID=R6A2Q4_9ACTN
Flavodoxin {ECO:0000313|EMBL:CDA35437.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
flavodoxin
L3_082_090G1_scaffold_307_13
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(12776..13528)
DNA (753bp) protein (251aa)
ABC transporter, ATP-binding protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E7S0_9ACTN
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EBA40779.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
ABC transporter-like protein
L3_082_090G1_scaffold_307_14
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(13541..14902)
DNA (1362bp) protein (454aa)
ABC transporter permease protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z9C1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72491.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
amino acid ABC transporter permease
L3_082_090G1_scaffold_307_15
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(15021..15881)
DNA (861bp) protein (287aa)
ABC transporter substrate-binding protein family 3 n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZFU1_9ACTN
ABC transporter substrate-binding protein family 3 {ECO:0000313|EMBL:CDA35434.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
family 3 extracellular solute-binding protein
L3_082_090G1_scaffold_307_16
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(16029..16895)
DNA (867bp) protein (289aa)
Probable endonuclease 4 {ECO:0000256|HAMAP-Rule:MF_00152}; EC=3.1.21.2 {ECO:0000256|HAMAP-Rule:MF_00152};; Endodeoxyribonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; Endonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Endonuclease IV (EC:3.1.21.-)
Probable endonuclease 4 n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E7S3_9ACTN
L3_082_090G1_scaffold_307_17
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(17067..18086)
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R6A2P9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA35432.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
dehydrogenase or related protein
L3_082_090G1_scaffold_307_18
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(18180..19814)
DNA (1635bp) protein (545aa)
Oxidoreductase, aldo/keto reductase family protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E7S8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72495.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
aldo/keto reductase
L3_082_090G1_scaffold_307_19
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

19849..20763
DNA (915bp) protein (305aa)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
2-dehydropantoate 2-reductase (EC:1.1.1.169)
2-dehydropantoate 2-reductase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E7T0_9ACTN
L3_082_090G1_scaffold_307_20
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(20872..21078)
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZFT8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA35429.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L3_082_090G1_scaffold_307_21
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(21266..22042)
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E7T2_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72498.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L3_082_090G1_scaffold_307_22
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(22355..23665)
DNA (1311bp) protein (437aa)
O-acetylhomoserine sulfhydrolase (EC:2.5.1.49)
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase n=1 Tax=Collinsella sp. CAG:166 RepID=R6A2P3_9ACTN
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase {ECO:0000313|EMBL:CDA35427.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L3_082_090G1_scaffold_307_23
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

23939..24877
DNA (939bp) protein (313aa)
Transcriptional regulator, LysR family n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E7T4_9ACTN
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EBA40793.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
MarR family transcriptional regulator
L3_082_090G1_scaffold_307_24
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

24941..25426
DNA (486bp) protein (162aa)
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437};; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
Ribonuclease HI (EC:3.1.26.4)
Ribonuclease H n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E7T5_9ACTN
L3_082_090G1_scaffold_307_25
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

25500..26606
DNA (1107bp) protein (369aa)
Oxidoreductase, NAD-binding domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E7T6_9ACTN
Oxidoreductase, NAD-binding domain protein {ECO:0000313|EMBL:EBA40795.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
oxidoreductase domain-containing protein
L3_082_090G1_scaffold_307_26
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

26609..27019
DNA (411bp) protein (137aa)
Putative acylphosphatase n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z9A5_9ACTN
Putative acylphosphatase {ECO:0000313|EMBL:CDA35420.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
acylphosphatase
L3_082_090G1_scaffold_307_27
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

27081..27461
DNA (381bp) protein (127aa)
Transcriptional regulator, Fur family n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E7T8_9ACTN
Transcriptional regulator, Fur family {ECO:0000313|EMBL:EBA40797.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
ferric uptake regulator, Fur family
L3_082_090G1_scaffold_307_28
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(27538..28335)
DNA (798bp) protein (266aa)
HAD hydrolase, family IIB n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E7T9_9ACTN
HAD hydrolase, family IIB {ECO:0000313|EMBL:EBA40798.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
HAD-superfamily hydrolase, subfamily IIB
L3_082_090G1_scaffold_307_29
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(28419..28997)
DNA (579bp) protein (193aa)
Urease accessory protein UreE C-terminal domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R6A2N3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72506.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L3_082_090G1_scaffold_307_30
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(29001..29429)
DNA (429bp) protein (143aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZM86_9ACTN
FKBP-type peptidyl-prolyl cis-trans isomerase
Displaying items 1-30 of 50 in total

View Taxonomy