ggKbase home page

L3_082_090G1_scaffold_319

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_082_090G1_scaffold_319_1
unknown

Not on your lists

58..210
DNA (153bp) protein (51aa)

This feature has no annotations

L3_082_090G1_scaffold_319_2
Bacteroides sp. 2_2_4, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(528..3119)
DNA (2592bp) protein (864aa)
Beta-glucosidase-related glycosidases (EC:3.2.1.21)
Glycosyl hydrolase family 3 C-terminal domain protein n=1 Tax=Bacteroides sp. 2_2_4 RepID=C3QS54_9BACE
Glycosyl hydrolase family 3 C-terminal domain protein {ECO:0000313|EMBL:EEO54788.1}; TaxID=469590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_2_4.;"
L3_082_090G1_scaffold_319_3
Bacteroides sp. 2_2_4, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3530..4297
DNA (768bp) protein (256aa)
Methyltransferase domain protein n=3 Tax=Bacteroides RepID=C3QS55_9BACE
Methyltransferase domain protein {ECO:0000313|EMBL:EEO54789.1}; TaxID=469590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_2_4.;"
Methylase involved in ubiquinone/menaquinone biosynthesis
L3_082_090G1_scaffold_319_4
Bacteroides sp. 2_2_4, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4431..8771)
DNA (4341bp) protein (1447aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Bacteroides sp. 2_2_4 RepID=C3QS56_9BACE
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:EEO54790.1}; TaxID=469590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_2_4.;"
two-component system sensor histidine kinase/response regulator
L3_082_090G1_scaffold_319_5
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9248..10225
DNA (978bp) protein (326aa)
Radical SAM protein, TIGR01212 family n=6 Tax=Bacteroides RepID=C3QS57_9BACE
Radical SAM protein, TIGR01212 family {ECO:0000313|EMBL:EFF53089.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
radical SAM protein, TIGR01212 family
L3_082_090G1_scaffold_319_6
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10284..11480
DNA (1197bp) protein (399aa)
Metallo-beta-lactamase domain protein n=3 Tax=Bacteroides RepID=C3QS58_9BACE
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:EFF53090.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
Uncharacterized flavoproteins
L3_082_090G1_scaffold_319_7
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11529..12341
DNA (813bp) protein (271aa)
glucosamine-6-phosphate deaminase (EC:3.5.99.6)
Glucosamine-6-phosphate deaminase {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000256|SAAS:SAAS00029492}; EC=3.5.99.6 {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000256|SAAS:SAAS00029496};; GlcN6P deaminase {ECO:0000256|HAMAP-Rule:MF_01241}; Glucosamine-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01241}; TaxID=997892 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens CL03T12C04.;"
Glucosamine-6-phosphate deaminase n=15 Tax=Bacteroides RepID=D6D1B1_9BACE
L3_082_090G1_scaffold_319_8
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12444..14570)
DNA (2127bp) protein (709aa)
Sialate O-acetylesterase n=1 Tax=Bacteroides sp. 3_1_23 RepID=D7K8K5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY62228.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
Sialic acid-specific 9-O-acetylesterase
L3_082_090G1_scaffold_319_9
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14718..15332)
DNA (615bp) protein (205aa)
Sua5/YciO/YrdC/YwlC family protein n=8 Tax=Bacteroides RepID=A7M497_BACOV
Sua5/YciO/YrdC/YwlC family protein {ECO:0000313|EMBL:EDO09080.1}; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
translation factor SUA5
L3_082_090G1_scaffold_319_10
Bacteroides ovatus CAG:22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15352..17880)
DNA (2529bp) protein (843aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=R6K5N3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDB57512.1}; TaxID=1263050 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides ovatus CAG:22.;"
AsmA family.
L3_082_090G1_scaffold_319_11
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18246..20240)
DNA (1995bp) protein (665aa)
TPR domain protein n=4 Tax=Bacteroides RepID=D7K8K8_9BACE
TPR domain protein {ECO:0000313|EMBL:EFI37094.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
PIF1 helicase./Helicase.
L3_082_090G1_scaffold_319_12
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20243..21028)
DNA (786bp) protein (262aa)
Cof-like hydrolase n=9 Tax=Bacteroides RepID=A7M4A0_BACOV
Cof-like hydrolase {ECO:0000313|EMBL:EFF53096.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
sugar-phosphatase
L3_082_090G1_scaffold_319_13
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21708..22697
DNA (990bp) protein (330aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 3_1_23 RepID=D7K8L0_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI37096.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
L3_082_090G1_scaffold_319_14
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22883..24055
DNA (1173bp) protein (391aa)
Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities (EC:2.6.1.-)
Cystathionine beta-lyase PatB n=4 Tax=Bacteroides RepID=C3QS67_9BACE
Putative hemolysin {ECO:0000313|EMBL:EFF53099.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
L3_082_090G1_scaffold_319_15
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24400..27165)
DNA (2766bp) protein (922aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I9T0F4_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY62221.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
hypothetical protein
L3_082_090G1_scaffold_319_16
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27162..28565)
DNA (1404bp) protein (468aa)
Uncharacterized protein n=3 Tax=Bacteroides ovatus RepID=A7M4A5_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EDO09088.1}; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
Endopolygalacturonase
L3_082_090G1_scaffold_319_17
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28562..29164)
DNA (603bp) protein (201aa)
Putative uncharacterized protein n=1 Tax=Bacteroides ovatus 3_8_47FAA RepID=F7LCI1_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EGN02210.1}; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
hypothetical protein
L3_082_090G1_scaffold_319_18
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29115..30650)
DNA (1536bp) protein (512aa)
Polygalacturonase (Pectinase) n=2 Tax=Bacteroides ovatus RepID=A7M4A7_BACOV
Polygalacturonase (Pectinase) {ECO:0000313|EMBL:EDO09090.1}; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
Endopolygalacturonase
L3_082_090G1_scaffold_319_19
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30699..31937)
DNA (1239bp) protein (413aa)
Rhamnogalacturonan acetylesterase rhgT domain protein {ECO:0000313|EMBL:KDS21817.1}; EC=3.1.1.- {ECO:0000313|EMBL:KDS21817.1};; TaxID=1339286 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3725 D9 ii.;"
GDSL-like protein n=6 Tax=Bacteroides RepID=C3QS72_9BACE
Lysophospholipase L1 and related esterases
L3_082_090G1_scaffold_319_20
Bacteroides sp. D2, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32067..34970)
DNA (2904bp) protein (968aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. D2 RepID=E5C6A8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFS30749.2}; TaxID=556259 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D2.;"
Beta-galactosidase/beta-glucuronidase
L3_082_090G1_scaffold_319_21
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35186..37543
DNA (2358bp) protein (786aa)
Putative uncharacterized protein n=1 Tax=Bacteroides ovatus 3_8_47FAA RepID=F7LCH7_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EGN02206.1}; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
Beta-xylosidase
L3_082_090G1_scaffold_319_22
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37575..39725
DNA (2151bp) protein (717aa)
Beta-galactosidase {ECO:0000256|PIRNR:PIRNR001084}; Short=Beta-gal {ECO:0000256|PIRNR:PIRNR001084};; EC=3.2.1.23 {ECO:0000256|PIRNR:PIRNR001084};; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
Beta-galactosidase (EC:3.2.1.23)
Beta-galactosidase trimerization domain protein n=2 Tax=Bacteroides ovatus RepID=A7M4B1_BACOV
L3_082_090G1_scaffold_319_23
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

39764..40129
DNA (366bp) protein (122aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A7M4B2_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EDO09095.1}; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
hypothetical protein
L3_082_090G1_scaffold_319_24
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

40174..41559
DNA (1386bp) protein (462aa)
Polygalacturonase (Pectinase) n=4 Tax=Bacteroides RepID=A7M4B3_BACOV
Polygalacturonase (Pectinase) {ECO:0000313|EMBL:EDO09096.1}; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
Endopolygalacturonase
L3_082_090G1_scaffold_319_25
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

41648..42334
DNA (687bp) protein (229aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=C3QS78_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI37108.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
hypothetical protein
L3_082_090G1_scaffold_319_26
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(42436..44517)
DNA (2082bp) protein (694aa)
SusD family protein n=5 Tax=Bacteroides RepID=A7M4B5_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY62210.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
SusD family.
L3_082_090G1_scaffold_319_27
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(44542..47673)
DNA (3132bp) protein (1044aa)
Putative outer membrane protein, probably involved in nutrient binding n=2 Tax=Bacteroides RepID=D7K8M4_9BACE
Putative outer membrane protein, probably involved in nutrient binding {ECO:0000313|EMBL:EFI37110.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
Outer membrane receptor proteins, mostly Fe transport
Displaying 27 items

View Taxonomy