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L3_082_090G1_scaffold_331

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Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_082_090G1_scaffold_331_1
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(588..1424)
DNA (837bp) protein (279aa)
Lipoprotein n=3 Tax=Lachnospiraceae RepID=A7AZY4_RUMGN
Lipoprotein {ECO:0000256|PIRNR:PIRNR002854}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
ABC-type metal ion transport system, periplasmic component/surface antigen
L3_082_090G1_scaffold_331_2
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1462..2121)
DNA (660bp) protein (220aa)
ABC transporter permease protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TLT2_9FIRM
ABC transporter permease protein {ECO:0000313|EMBL:CCZ66678.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
ABC-type metal ion transport system, permease component
L3_082_090G1_scaffold_331_3
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2111..3151)
DNA (1041bp) protein (347aa)
Methionine import ATP-binding protein MetN {ECO:0000256|HAMAP-Rule:MF_01719}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01719};; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
ABC transporter, ATP-binding protein n=3 Tax=Lachnospiraceae RepID=A7AZY6_RUMGN
phosphonate-transporting ATPase
L3_082_090G1_scaffold_331_4
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3291..4208)
DNA (918bp) protein (306aa)
Transcriptional regulator, LysR family n=3 Tax=Lachnospiraceae RepID=A7AZY7_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN44394.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Transcriptional regulator
L3_082_090G1_scaffold_331_5
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4205..4936)
DNA (732bp) protein (244aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000256|RuleBase:RU361267}; EC=2.3.1.51 {ECO:0000256|RuleBase:RU361267};; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
1-acyl-sn-glycerol-3-phosphate acyltransferases (EC:2.3.1.51)
Acyltransferase n=4 Tax=Clostridiales RepID=A7AZY8_RUMGN
L3_082_090G1_scaffold_331_6
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4954..5514)
DNA (561bp) protein (187aa)
hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region (EC:4.2.1.2)
Hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type n=3 Tax=Lachnospiraceae RepID=A7AZY9_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD15906.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L3_082_090G1_scaffold_331_7
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5539..6384)
DNA (846bp) protein (282aa)
hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region (EC:4.2.1.2)
Hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type n=4 Tax=Clostridiales RepID=A7AZZ0_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:CCZ66673.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L3_082_090G1_scaffold_331_8
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6538..7545)
DNA (1008bp) protein (336aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BL97_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN44390.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L3_082_090G1_scaffold_331_9
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(7759..10272)
DNA (2514bp) protein (838aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A n=4 Tax=Clostridiales RepID=A7AZZ2_RUMGN
L3_082_090G1_scaffold_331_10
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10308..12245)
DNA (1938bp) protein (646aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B n=4 Tax=Clostridiales RepID=A7AZZ3_RUMGN
L3_082_090G1_scaffold_331_11
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12257..13342)
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CC55_001C RepID=V8BN50_RUMGN
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
recF protein
L3_082_090G1_scaffold_331_12
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13384..13599)
DNA (216bp) protein (72aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7AZZ5_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN44384.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L3_082_090G1_scaffold_331_13
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13614..14723)
DNA (1110bp) protein (370aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
DNA polymerase III, beta subunit (EC:2.7.7.7)
DNA polymerase III subunit beta n=4 Tax=Clostridiales RepID=A7AZZ6_RUMGN
L3_082_090G1_scaffold_331_14
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15097..16467)
DNA (1371bp) protein (457aa)
Chromosomal replication initiator protein DnaA n=4 Tax=Clostridiales RepID=A7AZZ7_RUMGN
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
chromosomal replication initiator protein DnaA
L3_082_090G1_scaffold_331_15
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


17223..17357
DNA (135bp) protein (45aa)
50S ribosomal protein L34 n=4 Tax=Clostridiales RepID=A7AZZ9_RUMGN
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|SAAS:SAAS00020245}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
LSU ribosomal protein L34P
L3_082_090G1_scaffold_331_16
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17436..17771
DNA (336bp) protein (112aa)
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rule:MF_00227};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143815};; Protein C5 {ECO:0000256|HAMAP-Rule:MF_00227}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
ribonuclease P protein component (EC:3.1.26.5)
Ribonuclease P protein component n=4 Tax=Clostridiales RepID=A7B000_RUMGN
L3_082_090G1_scaffold_331_17
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17768..18004
DNA (237bp) protein (79aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=V8BM77_RUMGN
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
conserved hypothetical protein TIGR00278
L3_082_090G1_scaffold_331_18
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18017..19315
DNA (1299bp) protein (433aa)
Membrane protein insertase, YidC/Oxa1 family n=4 Tax=Clostridiales RepID=A7B002_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD15894.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
membrane protein insertase, YidC/Oxa1 family, C-terminal domain
L3_082_090G1_scaffold_331_19
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19342..20127
DNA (786bp) protein (262aa)
R3H domain protein n=4 Tax=Clostridiales RepID=A7B003_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD15893.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
Predicted RNA-binding protein
L3_082_090G1_scaffold_331_20
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20232..21608
DNA (1377bp) protein (459aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
tRNA modification GTPase MnmE n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TLU2_9FIRM
tRNA modification GTPase trmE
L3_082_090G1_scaffold_331_21
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21574..23481
DNA (1908bp) protein (636aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TTR2_9FIRM
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
glucose-inhibited division protein A
L3_082_090G1_scaffold_331_22
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23498..24211
DNA (714bp) protein (238aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
16S rRNA m(7)G-527 methyltransferase (EC:2.1.1.- 2.1.-.-)
Ribosomal RNA small subunit methyltransferase G n=4 Tax=Clostridiales RepID=A7B006_RUMGN
L3_082_090G1_scaffold_331_23
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24362..25345)
DNA (984bp) protein (328aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BL84_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN44371.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
alpha/beta fold family hydrolase
L3_082_090G1_scaffold_331_24
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25860..26627
DNA (768bp) protein (256aa)
CobQ/CobB/MinD/ParA nucleotide binding domain protein n=4 Tax=Clostridiales RepID=A7B009_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN44370.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
ATPases involved in chromosome partitioning
L3_082_090G1_scaffold_331_25
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26629..27537
DNA (909bp) protein (303aa)
ParB-like protein n=2 Tax=Clostridiales RepID=A7B010_RUMGN
ParB-like protein {ECO:0000313|EMBL:EDN78723.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
ParB-like partition proteins
L3_082_090G1_scaffold_331_26
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27573..28052
DNA (480bp) protein (160aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7B011_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN44368.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L3_082_090G1_scaffold_331_27
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28078..29364
DNA (1287bp) protein (429aa)
Serine--tRNA ligase {ECO:0000313|EMBL:EDN78725.1}; EC=6.1.1.11 {ECO:0000313|EMBL:EDN78725.1};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
seryl-tRNA synthetase (EC:6.1.1.11)
Serine--tRNA ligase n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B012_RUMGN
L3_082_090G1_scaffold_331_28
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29373..30248
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B013_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN78726.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
L3_082_090G1_scaffold_331_29
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30648..31919
DNA (1272bp) protein (424aa)
TRAP transporter, DctM subunit n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LAL8_9FIRM
TRAP transporter, DctM subunit {ECO:0000313|EMBL:EET62625.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
TRAP dicarboxylate transporter, DctM subunit
L3_082_090G1_scaffold_331_30
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31933..32583
DNA (651bp) protein (217aa)
Ribulose-phosphate 3-epimerase (EC:5.1.3.1)
Putative ribulose-phosphate 3-epimerase n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B016_RUMGN
Putative ribulose-phosphate 3-epimerase {ECO:0000313|EMBL:EDN78729.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Displaying items 1-30 of 47 in total

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