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L3_082_090G1_scaffold_335

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_082_090G1_scaffold_335_1
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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188..1591
DNA (1404bp) protein (468aa)
Uronate isomerase {ECO:0000256|HAMAP-Rule:MF_00675, ECO:0000256|SAAS:SAAS00013440}; EC=5.3.1.12 {ECO:0000256|HAMAP-Rule:MF_00675, ECO:0000256|SAAS:SAAS00013438};; Glucuronate isomerase {ECO:0000256|HAMAP-Rule:MF_00675}; Uronic isomerase {ECO:0000256|HAMAP-Rule:MF_00675}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
glucuronate isomerase (EC:5.3.1.12)
Uronate isomerase n=2 Tax=Bacteroides caccae RepID=A5ZCN1_9BACE
L3_082_090G1_scaffold_335_2
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1682..2101)
DNA (420bp) protein (140aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZCN2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM22251.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L3_082_090G1_scaffold_335_3
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2200..3588
DNA (1389bp) protein (463aa)
Transporter, major facilitator family protein n=3 Tax=Bacteroides caccae RepID=A5ZCN3_9BACE
Transporter, major facilitator family protein {ECO:0000313|EMBL:EDM22252.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
permease
L3_082_090G1_scaffold_335_4
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3672..4475
DNA (804bp) protein (268aa)
Metallo-beta-lactamase domain protein n=3 Tax=Bacteroides RepID=A5ZCN4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22192.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Metal-dependent hydrolases of the beta-lactamase superfamily I
L3_082_090G1_scaffold_335_5
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4808..5068)
DNA (261bp) protein (87aa)
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=A5ZCN5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM22254.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L3_082_090G1_scaffold_335_6
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5212..5646
DNA (435bp) protein (145aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZCN6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72104.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
lipoprotein
L3_082_090G1_scaffold_335_7
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5812..6249
DNA (438bp) protein (146aa)
DoxX family protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U209_9BACE
DoxX family protein {ECO:0000313|EMBL:CCZ72103.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Predicted membrane protein
L3_082_090G1_scaffold_335_8
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6356..6907
DNA (552bp) protein (184aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZCN8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72102.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L3_082_090G1_scaffold_335_9
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6933..7451
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5ULS6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72101.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L3_082_090G1_scaffold_335_10
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7405..9714)
DNA (2310bp) protein (770aa)
Outer membrane protein, OMP85 family n=2 Tax=Bacteroides caccae RepID=A5ZCP0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22186.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Outer membrane protein/protective antigen OMA87
L3_082_090G1_scaffold_335_11
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9855..10622
DNA (768bp) protein (256aa)
RNA methyltransferase, TrmH family n=2 Tax=Bacteroides caccae RepID=A5ZCP1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22185.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
tRNA/rRNA methyltransferase
L3_082_090G1_scaffold_335_12
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10573..10959)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9EPG4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22184.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_082_090G1_scaffold_335_13
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10964..12040)
DNA (1077bp) protein (359aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U204_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72098.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L3_082_090G1_scaffold_335_14
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12030..12689)
DNA (660bp) protein (220aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112541}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112508};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
signal peptidase II . Aspartic peptidase. MEROPS family A08 (EC:3.4.23.36)
Lipoprotein signal peptidase n=3 Tax=Bacteroides RepID=A5ZCP3_9BACE
L3_082_090G1_scaffold_335_15
Bacteroides finegoldii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12788..13168)
DNA (381bp) protein (127aa)
DnaK suppressor protein n=23 Tax=Bacteroides RepID=D6D706_9BACE
DnaK suppressor protein
Uncharacterized protein {ECO:0000313|EMBL:EKJ92322.1}; TaxID=997888 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides finegoldii CL09T03C10.;"
L3_082_090G1_scaffold_335_16
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(13204..16692)
DNA (3489bp) protein (1163aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02003}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
ileS; isoleucyl-tRNA synthetase (EC:6.1.1.5)
Isoleucine--tRNA ligase n=3 Tax=Bacteroides RepID=A5ZCP5_9BACE
L3_082_090G1_scaffold_335_17
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16903..17952
DNA (1050bp) protein (350aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZCP6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72094.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L3_082_090G1_scaffold_335_18
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18037..19575)
DNA (1539bp) protein (513aa)
Hydrolase, carbon-nitrogen family n=3 Tax=Bacteroides RepID=A5ZCP7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72093.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
carbon-nitrogen hydrolase
L3_082_090G1_scaffold_335_19
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19723..21177)
DNA (1455bp) protein (485aa)
MFS transporter, SP family n=2 Tax=Bacteroides caccae RepID=A5ZCP8_9BACE
Sugar porter (SP) family MFS transporter {ECO:0000313|EMBL:EIY22177.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
MFS transporter, sugar porter (SP) family
L3_082_090G1_scaffold_335_20
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21271..22587)
DNA (1317bp) protein (439aa)
Xylose isomerase {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609}; EC=5.3.1.5 {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609};; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
D-xylose isomerase (EC:5.3.1.5)
Xylose isomerase n=2 Tax=Bacteroides caccae RepID=A5ZCP9_9BACE
L3_082_090G1_scaffold_335_21
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22621..24141)
DNA (1521bp) protein (507aa)
Sugar (pentulose and hexulose) kinases (EC:2.7.1.17)
Carbohydrate kinase, FGGY family protein n=2 Tax=Bacteroides caccae RepID=A5ZCQ0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22175.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L3_082_090G1_scaffold_335_22
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24207..24938)
DNA (732bp) protein (244aa)
Hydrolase, NUDIX family n=3 Tax=Bacteroides RepID=A5ZCQ1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72089.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
NUDIX domain.
L3_082_090G1_scaffold_335_23
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25280..26116
DNA (837bp) protein (279aa)
Phosphomethylpyrimidine kinase {ECO:0000313|EMBL:EDM22272.1}; EC=2.7.4.7 {ECO:0000313|EMBL:EDM22272.1};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
phosphomethylpyrimidine kinase (EC:2.7.4.7)
Phosphomethylpyrimidine kinase n=2 Tax=Bacteroides caccae RepID=A5ZCQ3_9BACE
L3_082_090G1_scaffold_335_24
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26167..27054
DNA (888bp) protein (296aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Malonyl CoA-acyl carrier protein transacylase n=2 Tax=Bacteroides caccae RepID=A5ZCQ4_9BACE
malonyl CoA-ACP transacylase
L3_082_090G1_scaffold_335_25
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27247..28377
DNA (1131bp) protein (377aa)
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000256|HAMAP-Rule:MF_00558};; Succinyl-CoA synthetase subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Succinyl-CoA ligase [ADP-forming] subunit beta n=2 Tax=Bacteroides caccae RepID=A5ZCQ5_9BACE
succinyl-CoA synthetase beta chain
L3_082_090G1_scaffold_335_26
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28413..29381
DNA (969bp) protein (323aa)
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
succinyl-CoA synthetase (ADP-forming) alpha subunit (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit alpha n=2 Tax=Bacteroides caccae RepID=A5ZCQ6_9BACE
L3_082_090G1_scaffold_335_27
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29441..29686)
DNA (246bp) protein (82aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZCQ7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72084.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
RNA-binding proteins (RRM domain)
L3_082_090G1_scaffold_335_28
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29951..30115)
DNA (165bp) protein (55aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9Q032_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22168.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L3_082_090G1_scaffold_335_29
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30189..30752
DNA (564bp) protein (188aa)
Cyclic nucleotide-binding domain protein n=3 Tax=Bacteroides RepID=A5ZCQ8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72083.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
cAMP-binding proteins-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
L3_082_090G1_scaffold_335_30
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30891..31208)
DNA (318bp) protein (106aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZCQ9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22166.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
Displaying items 1-30 of 50 in total

View Taxonomy