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L3_082_090G1_scaffold_341

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_082_090G1_scaffold_341_1
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(84..1208)
DNA (1125bp) protein (375aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TYX3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68544.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
leucine rich repeats containing protein
L3_082_090G1_scaffold_341_2
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1198..1380)
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TS15_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68543.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L3_082_090G1_scaffold_341_3
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1583..2722)
DNA (1140bp) protein (380aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae CAG:59 RepID=R5FHN1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY00287.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
hypothetical protein
L3_082_090G1_scaffold_341_4
unknown

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comp(2976..3368)
DNA (393bp) protein (131aa)

This feature has no annotations

L3_082_090G1_scaffold_341_5
unknown

Not on your lists

comp(3387..3788)
DNA (402bp) protein (134aa)

This feature has no annotations

L3_082_090G1_scaffold_341_6
unknown

Not on your lists

comp(3880..4005)
DNA (126bp) protein (42aa)

This feature has no annotations

L3_082_090G1_scaffold_341_7
unknown

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comp(4102..4923)
DNA (822bp) protein (274aa)

This feature has no annotations

L3_082_090G1_scaffold_341_8
unknown

Not on your lists

comp(5360..5608)
DNA (249bp) protein (83aa)

This feature has no annotations

L3_082_090G1_scaffold_341_9
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5737..6327)
DNA (591bp) protein (197aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AKD6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG87258.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
L3_082_090G1_scaffold_341_10
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6464..6685
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A3A2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX37515.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
Cro/CI family transcriptional regulator -like protein
L3_082_090G1_scaffold_341_11
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7045..11340)
DNA (4296bp) protein (1432aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AKD7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG87259.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
L3_082_090G1_scaffold_341_12
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11330..12796)
DNA (1467bp) protein (489aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AKD8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG87260.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
L3_082_090G1_scaffold_341_13
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12958..13152)
DNA (195bp) protein (65aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AKD9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG87261.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
L3_082_090G1_scaffold_341_14
unknown

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comp(13614..13814)
DNA (201bp) protein (67aa)

This feature has no annotations

L3_082_090G1_scaffold_341_15
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14545..16194
DNA (1650bp) protein (550aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AKE0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG87262.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
L3_082_090G1_scaffold_341_16
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16492..17568)
DNA (1077bp) protein (359aa)
Peptide chain release factor 1 n=3 Tax=Clostridiales RepID=F7JSH8_9FIRM
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
bacterial peptide chain release factor 1 (bRF-1)
L3_082_090G1_scaffold_341_17
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17598..18449)
DNA (852bp) protein (284aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Release factor glutamine methyltransferase n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UD05_9FIRM
protein-(glutamine-N5) methyltransferase, release factor-specific
L3_082_090G1_scaffold_341_18
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18446..19417)
DNA (972bp) protein (324aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7AYM3_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49886.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Predicted metal-dependent enzyme
L3_082_090G1_scaffold_341_19
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(19490..19690)
DNA (201bp) protein (67aa)
50S ribosomal protein L31 n=6 Tax=Clostridiales RepID=R6F565_9FIRM
50S ribosomal protein L31 {ECO:0000256|HAMAP-Rule:MF_00501, ECO:0000256|SAAS:SAAS00004482}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
RpmE; 50S ribosomal protein L31
L3_082_090G1_scaffold_341_20
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19818..20600)
DNA (783bp) protein (261aa)
Formate/nitrite transporter n=4 Tax=Clostridiales RepID=A7AYM5_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD20617.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
formate/nitrite family of transporter
L3_082_090G1_scaffold_341_21
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20741..22078)
DNA (1338bp) protein (446aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Transcription termination factor Rho n=3 Tax=Lachnospiraceae RepID=A7AYM6_RUMGN
transcription termination factor Rho
L3_082_090G1_scaffold_341_22
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22319..23467
DNA (1149bp) protein (383aa)
Malic enzyme (EC:1.1.1.38)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R5U6Q0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN49890.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L3_082_090G1_scaffold_341_23
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23470..24393
DNA (924bp) protein (308aa)
TIGR01212 family radical SAM protein n=3 Tax=Clostridiales RepID=F7JSI5_9FIRM
TIGR01212 family radical SAM protein {ECO:0000313|EMBL:EGN49891.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
radical SAM protein, TIGR01212 family
L3_082_090G1_scaffold_341_24
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24386..24898
DNA (513bp) protein (171aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R5TM37_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN49892.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L3_082_090G1_scaffold_341_25
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24875..26191)
DNA (1317bp) protein (439aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8C0L4_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49893.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
ATPase related to the helicase subunit of the Holliday junction resolvase
L3_082_090G1_scaffold_341_26
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26221..26934)
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TM59_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ66843.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1
L3_082_090G1_scaffold_341_27
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26955..27638)
DNA (684bp) protein (228aa)
Polysaccharide deacetylase n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TU84_9FIRM
Polysaccharide deacetylase {ECO:0000313|EMBL:CCZ66844.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Predicted xylanase/chitin deacetylase
L3_082_090G1_scaffold_341_28
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27709..28566)
DNA (858bp) protein (286aa)
Transcriptional regulator AraC family n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TMB9_9FIRM
Transcriptional regulator AraC family {ECO:0000313|EMBL:CCZ66845.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
transcriptional regulator, AraC family
L3_082_090G1_scaffold_341_29
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28701..29876
DNA (1176bp) protein (392aa)
Galactokinase {ECO:0000256|HAMAP-Rule:MF_00246, ECO:0000256|SAAS:SAAS00025843}; EC=2.7.1.6 {ECO:0000256|HAMAP-Rule:MF_00246, ECO:0000256|SAAS:SAAS00015833};; Galactose kinase {ECO:0000256|HAMAP-Rule:MF_00246}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
galactokinase (EC:2.7.1.6)
Galactokinase n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5U6T6_9FIRM
L3_082_090G1_scaffold_341_30
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29895..31385
DNA (1491bp) protein (497aa)
Galactose-1-phosphate uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571}; Short=Gal-1-P uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571};; EC=2.7.7.12 {ECO:0000256|HAMAP-Rule:MF_00571};; UDP-glucose--hexose-1-phosphate uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
UTP-hexose-1-phosphate uridylyltransferase (EC:2.7.7.10)
Galactose-1-phosphate uridylyltransferase n=3 Tax=Lachnospiraceae RepID=A7AYN5_RUMGN
Displaying items 1-30 of 41 in total

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