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L3_082_090G1_scaffold_371

Search features with annotation key words

Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_082_090G1_scaffold_371_1
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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53..1441
DNA (1389bp) protein (463aa)
23S rRNA (Uracil-5-)-methyltransferase RumA n=2 Tax=Bacteroides ovatus RepID=I8YZB1_BACOV
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:EIY68495.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
RNA methyltransferase
L3_082_090G1_scaffold_371_2
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1478..2398
DNA (921bp) protein (307aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
pseudouridine synthase, RluA family (EC:5.4.99.12)
Pseudouridine synthase n=3 Tax=Bacteroides RepID=D7K193_9BACE
L3_082_090G1_scaffold_371_3
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2469..2882)
DNA (414bp) protein (138aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=A7LWR0_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY68493.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
hypothetical protein
L3_082_090G1_scaffold_371_4
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2994..4634
DNA (1641bp) protein (547aa)
Fe-S oxidoreductase (EC:4.-.-.-)
Radical SAM domain protein n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WDT7_BACOV
Radical SAM domain protein {ECO:0000313|EMBL:EFF53176.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
L3_082_090G1_scaffold_371_5
Bacteroides sp. 2_2_4, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4746..5369
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 2_2_4 RepID=C3QYZ3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEO57177.1}; TaxID=469590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_2_4.;"
hypothetical protein
L3_082_090G1_scaffold_371_6
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5470..6324
DNA (855bp) protein (285aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
methionine aminopeptidase, type I (EC:3.4.11.18)
Methionine aminopeptidase n=3 Tax=Bacteroides RepID=C3QYZ2_9BACE
L3_082_090G1_scaffold_371_7
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6324..7565
DNA (1242bp) protein (414aa)
RmuC domain protein n=3 Tax=Bacteroides ovatus RepID=D4WDU0_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY68489.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
hypothetical protein
L3_082_090G1_scaffold_371_8
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7798..8976)
DNA (1179bp) protein (393aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=C3QYZ0_9BACE
Putative membrane protein {ECO:0000313|EMBL:EFF53180.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
transporter, CPA2 family (2.A.37)
L3_082_090G1_scaffold_371_9
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9116..10327)
DNA (1212bp) protein (404aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
Elongation factor 4 n=3 Tax=Bacteroides RepID=C3QYY9_9BACE
GTP-binding protein LepA
L3_082_090G1_scaffold_371_10
Bacteroides sp. 2_2_4, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10324..10818)
DNA (495bp) protein (165aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=469590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_2_4.;"
Elongation factor 4 n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WDU2_BACOV
GTP-binding protein LepA
L3_082_090G1_scaffold_371_11
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10947..11147)
DNA (201bp) protein (67aa)
Uncharacterized protein n=22 Tax=Bacteroides RepID=A5ZDC3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY68486.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
hypothetical protein
L3_082_090G1_scaffold_371_12
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11161..11292)
DNA (132bp) protein (44aa)
Uncharacterized protein n=1 Tax=Bacteroides ovatus CL02T12C04 RepID=I8YZA1_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY68485.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
L3_082_090G1_scaffold_371_13
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11301..11759)
DNA (459bp) protein (153aa)
Oxidoreductase n=7 Tax=Bacteroides RepID=A7LWQ0_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EGM96717.1}; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
hypothetical protein
L3_082_090G1_scaffold_371_14
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11852..12118
DNA (267bp) protein (89aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=A7LWP9_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY68483.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
L3_082_090G1_scaffold_371_15
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12130..12537
DNA (408bp) protein (136aa)
Alpha-1,6-glucosidase, pullulanase-type n=5 Tax=Bacteroides RepID=D7K1A4_9BACE
Alpha-1,6-glucosidase, pullulanase-type {ECO:0000313|EMBL:EFI40503.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
hypothetical protein
L3_082_090G1_scaffold_371_16
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12532..13293)
DNA (762bp) protein (254aa)
exodeoxyribonuclease III (EC:3.1.11.2)
Exodeoxyribonuclease III n=1 Tax=Bacteroides sp. 3_1_23 RepID=D7K1A5_9BACE
Exodeoxyribonuclease III {ECO:0000313|EMBL:EFI40504.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
L3_082_090G1_scaffold_371_17
Bacteroides sp. D2, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13323..14576)
DNA (1254bp) protein (418aa)
Metal ion (Mn2+/Fe2+) transporter (Nramp) family metal ion transporter n=1 Tax=Bacteroides sp. D2 RepID=E5CFF0_9BACE
Metal ion (Mn2+/Fe2+) transporter (Nramp) family metal ion transporter {ECO:0000313|EMBL:EFS33473.1}; TaxID=556259 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D2.;"
Mn2+ and Fe2+ transporters of the NRAMP family
L3_082_090G1_scaffold_371_18
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14775..15020)
DNA (246bp) protein (82aa)
Uncharacterized protein n=9 Tax=Bacteroides RepID=A7LWP5_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY68479.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
hypothetical protein
L3_082_090G1_scaffold_371_19
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15030..15764)
DNA (735bp) protein (245aa)
Probable transcriptional regulatory protein BSGG_4171 n=9 Tax=Bacteroides RepID=E5CFE8_9BACE
Probable transcriptional regulatory protein BACOVA_02249 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
conserved hypothetical protein TIGR01033
L3_082_090G1_scaffold_371_20
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(15796..18258)
DNA (2463bp) protein (821aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
phenylalanyl-tRNA synthetase beta subunit (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit n=5 Tax=Bacteroides RepID=A7LWP3_BACOV
L3_082_090G1_scaffold_371_21
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18437..19996)
DNA (1560bp) protein (520aa)
Replicative DNA helicase {ECO:0000313|EMBL:EDO11752.1}; EC=3.6.1.- {ECO:0000313|EMBL:EDO11752.1};; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
primary replicative DNA helicase (EC:3.6.1.-)
Replicative DNA helicase n=7 Tax=Bacteroides RepID=A7LWP1_BACOV
L3_082_090G1_scaffold_371_22
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20235..21065
DNA (831bp) protein (277aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WDV3_BACOV
L3_082_090G1_scaffold_371_23
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21098..21460)
DNA (363bp) protein (121aa)
DNA-binding helix-turn-helix protein n=7 Tax=Bacteroides RepID=A7LWN9_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY68474.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
XRE family transcriptional regulator
L3_082_090G1_scaffold_371_24
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21471..21770)
DNA (300bp) protein (100aa)
Toxin-antitoxin system, toxin component, RelE family n=9 Tax=Bacteroides RepID=A7LWN8_BACOV
Toxin-antitoxin system, toxin component, RelE family {ECO:0000313|EMBL:EDO11749.1}; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
toxin RelE
L3_082_090G1_scaffold_371_25
Bacteroides sp. D2, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21855..21977
DNA (123bp) protein (41aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. D2 RepID=I0PYH3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIC71968.1}; TaxID=556259 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D2.;"
L3_082_090G1_scaffold_371_26
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22095..23129)
DNA (1035bp) protein (345aa)
UDP-galactose 4-epimerase (EC:5.1.3.2)
UDP-glucose 4-epimerase n=6 Tax=Bacteroides RepID=A7LWN7_BACOV
UDP-glucose 4-epimerase {ECO:0000313|EMBL:EGM96730.1}; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
L3_082_090G1_scaffold_371_27
Bacteroides sp. D2, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23354..23926)
DNA (573bp) protein (191aa)
Electron transport complex, RnfABCDGE type, A subunit n=7 Tax=Bacteroides RepID=A7LWN6_BACOV
electron transport complex, RnfABCDGE type, A subunit
Electron transport complex subunit A {ECO:0000256|HAMAP-Rule:MF_00459}; TaxID=556259 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D2.;"
L3_082_090G1_scaffold_371_28
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23949..24533)
DNA (585bp) protein (195aa)
Electron transport complex, RnfABCDGE type, E subunit n=17 Tax=Bacteroides RepID=D6D5H8_9BACE
electron transport complex, RnfABCDGE type, E subunit
Electron transport complex subunit E {ECO:0000256|HAMAP-Rule:MF_00478}; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
L3_082_090G1_scaffold_371_29
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24548..25264)
DNA (717bp) protein (239aa)
Electron transport complex, RnfABCDGE type, G subunit n=8 Tax=Bacteroides RepID=D4WDV9_BACOV
Electron transport complex subunit G {ECO:0000256|HAMAP-Rule:MF_00479}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
electron transport complex, RnfABCDGE type, G subunit
L3_082_090G1_scaffold_371_30
Bacteroides sp. D2, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25291..26283)
DNA (993bp) protein (331aa)
Electron transport complex, RnfABCDGE type, D subunit n=7 Tax=Bacteroides RepID=C3QYW9_9BACE
Electron transport complex subunit D {ECO:0000256|HAMAP-Rule:MF_00462}; TaxID=556259 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D2.;"
Na+-transporting NADH:ubiquinone oxidoreductase electron transport complex protein RnfD
Displaying items 1-30 of 55 in total

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