ggKbase home page

L3_082_090G1_scaffold_376

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_082_090G1_scaffold_376_1
Bacteroides sp. D1, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(59..649)
DNA (591bp) protein (197aa)
Transcriptional regulator n=17 Tax=Bacteroides RepID=D6D6H7_9BACE
transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EEO50338.1}; TaxID=556258 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D1.;"
L3_082_090G1_scaffold_376_2
Bacteroides sp. 1_1_30, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1144..1941)
DNA (798bp) protein (266aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=C3QXY1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGM96456.1}; TaxID=457387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_30.;"
Domain of unknown function (DUF303).
L3_082_090G1_scaffold_376_3
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1959..4634)
DNA (2676bp) protein (892aa)
Beta-galactosidase/beta-glucuronidase n=8 Tax=Bacteroides RepID=D6D6H5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY59132.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
Beta-galactosidase/beta-glucuronidase
L3_082_090G1_scaffold_376_4
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4654..7011)
DNA (2358bp) protein (786aa)
Uncharacterized protein n=3 Tax=Bacteroides ovatus RepID=I9SSU8_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY59133.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
Alpha-glucosidases, family 31 of glycosyl hydrolases
L3_082_090G1_scaffold_376_5
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7020..8813)
DNA (1794bp) protein (598aa)
Uncharacterized protein n=1 Tax=Bacteroides xylanisolvens CL03T12C04 RepID=I9AD59_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY85675.1}; TaxID=997892 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens CL03T12C04.;"
hypothetical protein
L3_082_090G1_scaffold_376_6
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8870..9883)
DNA (1014bp) protein (338aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=C3QXY5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY69111.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
hypothetical protein
L3_082_090G1_scaffold_376_7
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9941..11497)
DNA (1557bp) protein (519aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=R6JGS1_9BACE
Putative lipoprotein {ECO:0000313|EMBL:KDS11330.1}; TaxID=1339346 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus str. 3725 D1 iv.;"
hypothetical protein
L3_082_090G1_scaffold_376_8
Bacteroides ovatus CAG:22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11887..13449)
DNA (1563bp) protein (521aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=I9AEA3_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDB57860.1}; TaxID=1263050 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides ovatus CAG:22.;"
L3_082_090G1_scaffold_376_9
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13478..14089)
DNA (612bp) protein (204aa)
Fasciclin domain n=8 Tax=Bacteroides RepID=D6D6G9_9BACE
Fasciclin domain.
Uncharacterized protein {ECO:0000313|EMBL:EDO10975.1}; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
L3_082_090G1_scaffold_376_10
Bacteroides ovatus CAG:22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14104..15573)
DNA (1470bp) protein (490aa)
SusD family n=5 Tax=Bacteroides RepID=D6D6G8_9BACE
SusD family.
Uncharacterized protein {ECO:0000313|EMBL:CDB57862.1}; TaxID=1263050 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides ovatus CAG:22.;"
L3_082_090G1_scaffold_376_11
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15587..18724)
DNA (3138bp) protein (1046aa)
Outer membrane protein n=5 Tax=Bacteroides RepID=D7J655_9BACE
Outer membrane protein {ECO:0000313|EMBL:EFI13030.1}; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
Outer membrane receptor proteins, mostly Fe transport
L3_082_090G1_scaffold_376_12
Bacteroides sp. 1_1_30, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19060..23085)
DNA (4026bp) protein (1342aa)
Putative flagellar protein FliS n=2 Tax=Bacteroides RepID=D4WHP6_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EGM96446.1}; TaxID=457387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_30.;"
Signal transduction histidine kinase
L3_082_090G1_scaffold_376_13
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23194..24093)
DNA (900bp) protein (300aa)
AraC-type DNA-binding domain-containing proteins n=11 Tax=Bacteroides RepID=D6D6G5_9BACE
AraC-type DNA-binding domain-containing proteins
Uncharacterized protein {ECO:0000313|EMBL:EIY59142.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
L3_082_090G1_scaffold_376_14
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24269..25423)
DNA (1155bp) protein (385aa)
lactaldehyde reductase (EC:1.1.1.77)
Lactaldehyde reductase {ECO:0000313|EMBL:CDM07104.1}; EC=1.1.1.77 {ECO:0000313|EMBL:CDM07104.1};; TaxID=702447 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens SD CC 1b.;"
Lactaldehyde reductase n=12 Tax=Bacteroides RepID=D6D6G4_9BACE
L3_082_090G1_scaffold_376_15
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25520..26329)
DNA (810bp) protein (270aa)
L-rhamnulose 1-phosphate aldolase (EC:4.1.2.19)
L-rhamnulose 1-phosphate aldolase n=6 Tax=Bacteroides RepID=D6D6G3_9BACE
Putative rhamnulose-1-phosphate aldolase {ECO:0000313|EMBL:EFF51928.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
L3_082_090G1_scaffold_376_16
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26422..27441)
DNA (1020bp) protein (340aa)
L-rhamnose-proton symport protein (RhaT) n=3 Tax=Bacteroides RepID=D6D6G2_9BACE
L-rhamnose-proton symport protein (RhaT).
L-rhamnose/H+ symporter {ECO:0000313|EMBL:EFI38625.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
L3_082_090G1_scaffold_376_17
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27445..28701)
DNA (1257bp) protein (419aa)
L-rhamnose isomerase {ECO:0000256|HAMAP-Rule:MF_00541}; EC=5.3.1.14 {ECO:0000256|HAMAP-Rule:MF_00541};; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
L-rhamnose isomerase (EC:5.3.1.14)
L-rhamnose isomerase n=3 Tax=Bacteroides RepID=A7M0H3_BACOV
L3_082_090G1_scaffold_376_18
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28748..30208)
DNA (1461bp) protein (487aa)
Rhamnulokinase {ECO:0000256|HAMAP-Rule:MF_01535}; Short=RhaB {ECO:0000256|HAMAP-Rule:MF_01535};; EC=2.7.1.5 {ECO:0000256|HAMAP-Rule:MF_01535};; ATP:L-rhamnulose phosphotransferase {ECO:0000256|HAMAP-Rule:MF_01535}; L-rhamnulose 1-kinase {ECO:0000256|HAMAP-Rule:MF_01535}; Rhamnulose kinase {ECO:0000256|HAMAP-Rule:MF_01535}; TaxID=997892 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens CL03T12C04.;"
L-rhamnulokinase (EC:2.7.1.51 2.7.1.5)
Rhamnulokinase n=1 Tax=Bacteroides sp. D2 RepID=E5C8W4_9BACE
L3_082_090G1_scaffold_376_19
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30473..31492)
DNA (1020bp) protein (340aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=A7M0H0_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY69098.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
hypothetical protein
L3_082_090G1_scaffold_376_20
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31537..33390)
DNA (1854bp) protein (618aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=C3QXZ9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY69097.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
Predicted periplasmic protein (DUF2233).
L3_082_090G1_scaffold_376_21
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33409..35160)
DNA (1752bp) protein (584aa)
SusD family protein n=3 Tax=Bacteroides ovatus RepID=A7M0G8_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY59150.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
SusD family.
L3_082_090G1_scaffold_376_22
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35184..38759)
DNA (3576bp) protein (1192aa)
TonB-linked outer membrane protein, SusC/RagA family n=3 Tax=Bacteroides RepID=A7M0G7_BACOV
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EIY59151.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
SusC/RagA family TonB-linked outer membrane protein
L3_082_090G1_scaffold_376_23
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38910..39932)
DNA (1023bp) protein (341aa)
Sigma factor regulatory protein, FecR/PupR family n=3 Tax=Bacteroides RepID=A7M0G6_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY59152.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
Fe2+-dicitrate sensor, membrane component
L3_082_090G1_scaffold_376_24
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(40052..40624)
DNA (573bp) protein (191aa)
RNA polymerase sigma-70 factor n=4 Tax=Bacteroides RepID=A7M0G5_BACOV
RNA polymerase sigma-70 factor, expansion family 1 {ECO:0000313|EMBL:EIY59153.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
RNA polymerase sigma70 factor
L3_082_090G1_scaffold_376_25
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(40696..40860)
DNA (165bp) protein (55aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=C3QY04_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY69092.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
L3_082_090G1_scaffold_376_26
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

40892..41365
DNA (474bp) protein (158aa)
Arginine repressor n=12 Tax=Bacteroides RepID=D6D6F8_9BACE
transcriptional regulator, ArgR family
Arginine repressor {ECO:0000256|HAMAP-Rule:MF_00173}; TaxID=1339346 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus str. 3725 D1 iv.;"
L3_082_090G1_scaffold_376_27
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

41390..41968
DNA (579bp) protein (193aa)
Uncharacterized protein n=17 Tax=Bacteroides RepID=A7M0G2_BACOV
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK69660.1}; TaxID=657309 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens XB1A.;"
Displaying 27 items

View Taxonomy