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L3_082_090G1_scaffold_385

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_082_090G1_scaffold_385_1
Bacteroides massiliensis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2..1951
DNA (1950bp) protein (650aa)
Uncharacterized protein n=1 Tax=Bacteroides massiliensis dnLKV3 RepID=R9IAR5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOS14229.1}; TaxID=1235788 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides massiliensis dnLKV3.;"
hypothetical protein
L3_082_090G1_scaffold_385_2
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2015..3403
DNA (1389bp) protein (463aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HIQ0_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EOS03804.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
polygalacturonase
L3_082_090G1_scaffold_385_3
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3400..5307
DNA (1908bp) protein (636aa)
Rhamnogalacturonan lyase yesW {ECO:0000313|EMBL:KDS54675.1}; EC=4.2.2.- {ECO:0000313|EMBL:KDS54675.1};; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
Polysaccharide lyase family 11, candidate rhamnogalacturonan lyase n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6KWR6_BACV8
polysaccharide lyase 11, rhamnogalacturonan lyase
L3_082_090G1_scaffold_385_4
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5320..6735
DNA (1416bp) protein (472aa)
Glycosyl hydrolase, family 88 n=3 Tax=Bacteroides RepID=D4V7C0_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EOS03802.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
hypothetical protein
L3_082_090G1_scaffold_385_5
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6773..7087
DNA (315bp) protein (105aa)
L-rhamnose mutarotase {ECO:0000256|SAAS:SAAS00048862}; EC=5.1.3.32 {ECO:0000256|SAAS:SAAS00169483};; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L-rhamnose mutarotase n=7 Tax=Bacteroides RepID=RHAM_BACV8
hypothetical protein
L3_082_090G1_scaffold_385_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7168..11454
DNA (4287bp) protein (1429aa)
Response regulator receiver domain protein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V7B8_BACVU
Response regulator receiver domain protein {ECO:0000313|EMBL:EFG18275.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
two-component system sensor histidine kinase/response regulator, hybrid
L3_082_090G1_scaffold_385_7
Bacteroides dorei CAG:222, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11536..11754)
DNA (219bp) protein (73aa)
Uncharacterized protein n=8 Tax=Bacteroides RepID=C3PWD6_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDB38998.1}; TaxID=1263042 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides dorei CAG:222.;"
L3_082_090G1_scaffold_385_8
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(11909..12262)
DNA (354bp) protein (118aa)
50S ribosomal protein L19 n=15 Tax=Bacteroides RepID=RL19_BACV8
rplS; 50S ribosomal protein L19
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=997877 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei CL03T12C01.;"
L3_082_090G1_scaffold_385_9
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12460..13239
DNA (780bp) protein (260aa)
5'-nucleotidase, C-terminal domain protein n=3 Tax=Bacteroides RepID=C6Z392_9BACE
5'-nucleotidase, C-terminal domain protein {ECO:0000313|EMBL:EET15351.2}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
5'-nucleotidase
L3_082_090G1_scaffold_385_10
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13251..14093
DNA (843bp) protein (281aa)
5'-nucleotidase n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HJ47_BACVU
5'-nucleotidase {ECO:0000313|EMBL:EOS03796.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
5'-nucleotidase
L3_082_090G1_scaffold_385_11
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14139..17117
DNA (2979bp) protein (993aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
Uncharacterized protein n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HRF2_BACVU
glycoside hydrolase family protein
L3_082_090G1_scaffold_385_12
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17235..17402
DNA (168bp) protein (56aa)
Ferredoxin n=14 Tax=Bacteroides RepID=C3PWD1_9BACE
4Fe-4S ferredoxin
Ferredoxin {ECO:0000313|EMBL:EET15348.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
L3_082_090G1_scaffold_385_13
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17580..18773)
DNA (1194bp) protein (398aa)
Aspartate aminotransferase n=3 Tax=Bacteroides RepID=A6KWQ8_BACV8
aspartate aminotransferase
DegT/DnrJ/EryC1/StrS aminotransferase family protein {ECO:0000313|EMBL:KDS54665.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L3_082_090G1_scaffold_385_14
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18899..20113)
DNA (1215bp) protein (405aa)
Riboflavin biosynthesis protein RibBA n=7 Tax=Bacteroides RepID=RIBBA_BACV8
GTP cyclohydrolase II
Riboflavin biosynthesis protein RibBA {ECO:0000256|HAMAP-Rule:MF_01283, ECO:0000256|SAAS:SAAS00280052}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
L3_082_090G1_scaffold_385_15
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20116..21966)
DNA (1851bp) protein (617aa)
Uncharacterized protein n=2 Tax=Bacteroides vulgatus RepID=A6KWQ6_BACV8
Putative membrane protein {ECO:0000313|EMBL:EFG18266.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
hypothetical protein
L3_082_090G1_scaffold_385_16
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22098..22484)
DNA (387bp) protein (129aa)
Uncharacterized protein n=2 Tax=Bacteroides vulgatus RepID=A6KWQ5_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDS26395.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L3_082_090G1_scaffold_385_17
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23018..25822
DNA (2805bp) protein (935aa)
Transcriptional regulator n=2 Tax=Bacteroides vulgatus RepID=A6KWQ4_BACV8
Bacterial regulatory helix-turn-helix s, AraC family protein {ECO:0000313|EMBL:KDS26399.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
transcriptional regulator
L3_082_090G1_scaffold_385_18
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26058..27284
DNA (1227bp) protein (409aa)
Glycoside hydrolase family 88, candidate delta-4,5 unsaturated glucuronyl hydrolase n=3 Tax=root RepID=A6KWQ3_BACV8
delta\-4\,5\ unsaturated\ glucuronyl\ hydrolase
Glycoside hydrolase family 88, candidate delta-4,5 unsaturated glucuronyl hydrolase {ECO:0000313|EMBL:ABR37867.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_082_090G1_scaffold_385_19
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27309..27854
DNA (546bp) protein (182aa)
RNA polymerase sigma-70 factor n=4 Tax=Bacteroides vulgatus RepID=D4V8X3_BACVU
RNA polymerase ECF-type sigma factor
RNA polymerase sigma-70 factor, expansion 1 family protein {ECO:0000313|EMBL:KDS26413.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L3_082_090G1_scaffold_385_20
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27980..31057
DNA (3078bp) protein (1026aa)
TonB-dependent receptor plug domain protein n=3 Tax=Bacteroides vulgatus RepID=D4V8X2_BACVU
hypothetical protein
Putative outer membrane protein, probably involved in nutrient binding {ECO:0000313|EMBL:ABR37865.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_082_090G1_scaffold_385_21
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31068..32894
DNA (1827bp) protein (609aa)
Uncharacterized protein n=2 Tax=Bacteroides vulgatus RepID=R9HIM7_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EOS03779.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
hypothetical protein
L3_082_090G1_scaffold_385_22
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33046..34980
DNA (1935bp) protein (645aa)
Glycoside hydrolase family 97 n=2 Tax=Bacteroides vulgatus RepID=A6KWP9_BACV8
Glycoside hydrolase family 97 {ECO:0000313|EMBL:ABR37863.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
glycoside hydrolase
L3_082_090G1_scaffold_385_23
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34977..38402
DNA (3426bp) protein (1142aa)
Glycoside hydrolase family 92 n=2 Tax=Bacteroides vulgatus RepID=A6KWP8_BACV8
Alpha-1,2-mannosidase family protein {ECO:0000313|EMBL:KDS26433.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
glycoside hydrolase
L3_082_090G1_scaffold_385_24
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38556..40922)
DNA (2367bp) protein (789aa)
Glycoside hydrolase family 3, candidate beta-glycosidase n=2 Tax=Bacteroides vulgatus RepID=A6KWP7_BACV8
Glycoside hydrolase family 3, candidate beta-glycosidase {ECO:0000313|EMBL:ABR37861.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
glycoside hydrolase family protein
L3_082_090G1_scaffold_385_25
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

41046..42659
DNA (1614bp) protein (538aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I8ZRB8_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EOS04118.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
hypothetical protein
L3_082_090G1_scaffold_385_26
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

42749..45487
DNA (2739bp) protein (913aa)
Uncharacterized protein n=2 Tax=Bacteroides vulgatus RepID=I9U6Q3_BACVU
Heparinase II/III-like protein {ECO:0000313|EMBL:EFG17779.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
hypothetical protein
L3_082_090G1_scaffold_385_27
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

45646..48459
DNA (2814bp) protein (938aa)
Transcriptional regulator, AraC family n=2 Tax=Bacteroides RepID=D4V8W4_BACVU
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EFG17777.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
transcriptional regulator
L3_082_090G1_scaffold_385_28
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

48660..49175
DNA (516bp) protein (172aa)
RNA polymerase ECF-type sigma factor n=5 Tax=Bacteroides RepID=A6KWP3_BACV8
RNA polymerase ECF-type sigma factor
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EOS04115.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_082_090G1_scaffold_385_29
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

49219..52545
DNA (3327bp) protein (1109aa)
TonB-linked outer membrane protein, SusC/RagA family n=3 Tax=Bacteroides RepID=C6Z379_9BACE
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EET15338.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
hypothetical protein
L3_082_090G1_scaffold_385_30
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

52568..54595
DNA (2028bp) protein (676aa)
Putative outer membrane protein, probably involved in nutrient binding n=2 Tax=Bacteroides vulgatus RepID=A6KWP1_BACV8
Putative outer membrane protein, probably involved in nutrient binding {ECO:0000313|EMBL:ABR37855.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
hypothetical protein
Displaying items 1-30 of 36 in total

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