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L3_082_090G1_scaffold_386

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_082_090G1_scaffold_386_1
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(131..1198)
DNA (1068bp) protein (356aa)
Peptide chain release factor 1 n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBF6_9ACTN
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
peptide chain release factor 1
L3_082_090G1_scaffold_386_2
unknown

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1575..1679
DNA (105bp) protein (35aa)

This feature has no annotations

L3_082_090G1_scaffold_386_3
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1761..12143)
DNA (10383bp) protein (3461aa)
Pilin isopeptide linkage domain protein n=1 Tax=Bifidobacterium dentium ATCC 27678 RepID=B1S7R1_9BIFI
Pilin isopeptide linkage domain protein {ECO:0000313|EMBL:EFM40712.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
hypothetical protein
L3_082_090G1_scaffold_386_4
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(12331..13758)
DNA (1428bp) protein (476aa)
Peptidase dimerization domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBF3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72594.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
peptidase M20
L3_082_090G1_scaffold_386_5
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(13816..14601)
DNA (786bp) protein (262aa)
Putative molybdenum cofactor biosynthesis protein C n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBF2_9ACTN
Putative molybdenum cofactor biosynthesis protein C {ECO:0000313|EMBL:EBA39156.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
amino acid ABC transporter ATP-binding protein
L3_082_090G1_scaffold_386_6
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(14624..15772)
DNA (1149bp) protein (383aa)
ABC transporter, permease protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBF1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72592.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
polar amino acid ABC transporter inner membrane subunit
L3_082_090G1_scaffold_386_7
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(15782..16708)
DNA (927bp) protein (309aa)
Tat pathway signal sequence domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBF0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72591.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
amino acid ABC transporter substrate-binding protein
L3_082_090G1_scaffold_386_8
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(16972..17865)
DNA (894bp) protein (298aa)
Aldose 1-epimerase n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z6L4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72590.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
aldose-1-epimerase
L3_082_090G1_scaffold_386_9
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(17945..18814)
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZFL8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA35354.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L3_082_090G1_scaffold_386_10
Coriobacterium glomerans, Coriobacterium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(18974..19921)
DNA (948bp) protein (316aa)
NUDIX hydrolase n=1 Tax=Coriobacterium glomerans (strain ATCC 49209 / DSM 20642 / JCM 10262 / PW2) RepID=F2N9Z3_CORGP
NUDIX hydrolase
Isopentenyl-diphosphate Delta-isomerase {ECO:0000256|SAAS:SAAS00231155}; TaxID=700015 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Coriobacterium.;" source="Coriobacterium glomerans (strain ATCC 49209 / DSM 20642 / JCM 10262 /; PW2).;"
L3_082_090G1_scaffold_386_11
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

20068..21333
DNA (1266bp) protein (422aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z935_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72588.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
major facilitator superfamily protein
L3_082_090G1_scaffold_386_12
unknown

Not on your lists

21383..21505
DNA (123bp) protein (41aa)

This feature has no annotations

L3_082_090G1_scaffold_386_13
Olsenella profusa, Olsenella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

21546..22916
DNA (1371bp) protein (457aa)
AAA domain protein n=1 Tax=Olsenella profusa F0195 RepID=U2T3M6_9ACTN
AAA domain protein {ECO:0000313|EMBL:ERL07664.1}; TaxID=1125712 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Olsenella.;" source="Olsenella profusa F0195.;"
ATPase
L3_082_090G1_scaffold_386_14
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

22950..23396
DNA (447bp) protein (149aa)
Protein-tyrosine-phosphatase (EC:3.1.3.48)
Low molecular weight phosphotyrosine protein phosphatase n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZM48_9ACTN
Low molecular weight phosphotyrosine protein phosphatase {ECO:0000313|EMBL:CDA35356.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L3_082_090G1_scaffold_386_15
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(23529..23858)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBE4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72585.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L3_082_090G1_scaffold_386_16
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(23851..24675)
DNA (825bp) protein (275aa)
Pyridoxal kinase {ECO:0000256|SAAS:SAAS00088591}; EC=2.7.1.35 {ECO:0000256|SAAS:SAAS00088591};; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
Pyridoxal kinase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBE3_9ACTN
pyridoxal/pyridoxine/pyridoxamine kinase
L3_082_090G1_scaffold_386_17
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

25123..25629
DNA (507bp) protein (169aa)
Transcriptional regulator, MarR family n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBE2_9ACTN
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EBA39146.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
MarR family transcripitonal regulator
L3_082_090G1_scaffold_386_18
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

25622..27436
DNA (1815bp) protein (605aa)
ABC transporter ATP-binding protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z960_9ACTN
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDA35375.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
ABC transporter
L3_082_090G1_scaffold_386_19
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

27429..29348
DNA (1920bp) protein (640aa)
ABC transporter, ATP-binding protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBE0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72653.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
ABC transporter
L3_082_090G1_scaffold_386_20
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(29679..30413)
DNA (735bp) protein (245aa)
Sortase, SrtB family n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBD3_9ACTN
Sortase, SrtB family {ECO:0000313|EMBL:EBA39137.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
sortase, SrtB family
L3_082_090G1_scaffold_386_21
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(30434..31537)
DNA (1104bp) protein (368aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBD0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA39134.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
surface-anchored protein
L3_082_090G1_scaffold_386_22
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(31589..32221)
DNA (633bp) protein (211aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
signal peptidase I, bacterial type (EC:3.4.21.89)
Signal peptidase I n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBC9_9ACTN
L3_082_090G1_scaffold_386_23
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(32218..35460)
DNA (3243bp) protein (1081aa)
Repeat protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBC8_9ACTN
Repeat protein {ECO:0000313|EMBL:EBA39132.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
putative peptidoglycan bound protein
L3_082_090G1_scaffold_386_24
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(35755..36633)
DNA (879bp) protein (293aa)
Transcriptional regulator, LysR family n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBC7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72650.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
LysR family transcriptional regulator
L3_082_090G1_scaffold_386_25
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

36866..37747
DNA (882bp) protein (294aa)
fabG; 3-oxoacyl-[acyl-carrier protein] reductase (EC:1.1.1.36)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBC6_9ACTN
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:EBA39130.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L3_082_090G1_scaffold_386_26
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

37814..39070
DNA (1257bp) protein (419aa)
Transporter major facilitator family protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z8M9_9ACTN
Transporter major facilitator family protein {ECO:0000313|EMBL:CDA36018.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L3_082_090G1_scaffold_386_27
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

39137..40177
DNA (1041bp) protein (347aa)
NAD-dependent oxidoreductase (EC:1.1.1.179)
Oxidoreductase, NAD-binding domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBC4_9ACTN
Oxidoreductase, NAD-binding domain protein {ECO:0000313|EMBL:EBA39128.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Displaying 27 items

View Taxonomy