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L3_082_090G1_scaffold_388

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_082_090G1_scaffold_388_1
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

80..1147
DNA (1068bp) protein (356aa)
Transcriptional regulator, LacI family n=3 Tax=Bacteroides RepID=A5ZCN0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73233.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Transcriptional regulators
L3_082_090G1_scaffold_388_2
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1174..2616
DNA (1443bp) protein (481aa)
Altronate oxidoreductase {ECO:0000256|HAMAP-Rule:MF_00670}; EC=1.1.1.58 {ECO:0000256|HAMAP-Rule:MF_00670};; Tagaturonate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00670}; Tagaturonate reductase {ECO:0000256|HAMAP-Rule:MF_00670}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
tagaturonate reductase (EC:1.1.1.58)
Altronate oxidoreductase n=2 Tax=Bacteroides caccae RepID=A5ZCM9_9BACE
L3_082_090G1_scaffold_388_3
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2697..3227)
DNA (531bp) protein (177aa)
FHA domain protein n=2 Tax=Bacteroides caccae RepID=A5ZCM8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22199.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_082_090G1_scaffold_388_4
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3246..4304)
DNA (1059bp) protein (353aa)
Sporulation and cell division repeat protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U5D5_9BACE
Sporulation and cell division repeat protein {ECO:0000313|EMBL:CCZ73230.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Sporulation related domain.
L3_082_090G1_scaffold_388_5
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4395..4943
DNA (549bp) protein (183aa)
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3,5-epimerase n=2 Tax=Bacteroides RepID=I9PZH1_9BACE
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:EIY22201.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L3_082_090G1_scaffold_388_6
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4968..6281
DNA (1314bp) protein (438aa)
nucleotide sugar dehydrogenase (EC:1.1.1.22)
Nucleotide sugar dehydrogenase n=3 Tax=Bacteroides RepID=A5ZCM5_9BACE
Nucleotide sugar dehydrogenase {ECO:0000313|EMBL:CCZ73228.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
L3_082_090G1_scaffold_388_7
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6360..7115
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9Q070_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM22243.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L3_082_090G1_scaffold_388_8
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7120..8382)
DNA (1263bp) protein (421aa)
DEAD/DEAH box helicase n=2 Tax=Bacteroides caccae RepID=A5ZCM3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22204.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
ATP-dependent RNA helicase
L3_082_090G1_scaffold_388_9
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8430..9659)
DNA (1230bp) protein (410aa)
phosphoserine phosphatase (EC:3.1.3.3)
Phosphoserine phosphatase SerB n=2 Tax=Bacteroides RepID=I8V6W5_9BACE
Phosphoserine phosphatase SerB {ECO:0000313|EMBL:EIY22205.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L3_082_090G1_scaffold_388_10
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9926..10429
DNA (504bp) protein (168aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=A5ZCM1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM22240.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L3_082_090G1_scaffold_388_11
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10592..11689)
DNA (1098bp) protein (366aa)
Permease, YjgP/YjgQ family n=3 Tax=Bacteroides RepID=A5ZCM0_9BACE
Permease, YjgP/YjgQ family {ECO:0000313|EMBL:EDM22239.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Predicted permeases
L3_082_090G1_scaffold_388_12
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11693..12823)
DNA (1131bp) protein (377aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
tRNA-guanine transglycosylase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase n=3 Tax=Bacteroides RepID=A5ZCL9_9BACE
L3_082_090G1_scaffold_388_13
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12820..15288)
DNA (2469bp) protein (823aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HAMAP-Rule:MF_01973}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
ATP-dependent protease La (EC:3.4.21.53)
Lon protease n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZCL8_9BACE
L3_082_090G1_scaffold_388_14
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15503..16213
DNA (711bp) protein (237aa)
tRNA1(Val) (adenine(37)-N6)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01872, ECO:0000256|SAAS:SAAS00016413}; EC=2.1.1.223 {ECO:0000256|HAMAP-Rule:MF_01872, ECO:0000256|SAAS:SAAS00016405};; tRNA m6A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01872}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
tRNA1(Val) (adenine(37)-N6)-methyltransferase n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U5C7_9BACE
Predicted O-methyltransferase
L3_082_090G1_scaffold_388_15
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16406..16600)
DNA (195bp) protein (65aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZCL6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM22235.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L3_082_090G1_scaffold_388_16
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16750..16911
DNA (162bp) protein (54aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZCL5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73218.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
methyltransferase
L3_082_090G1_scaffold_388_17
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17575..18852)
DNA (1278bp) protein (426aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=3 Tax=Bacteroides RepID=A5ZCL3_9BACE
two-component system sensor histidine kinase
L3_082_090G1_scaffold_388_18
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18849..20225)
DNA (1377bp) protein (459aa)
Sigma-54 interaction domain protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZCL2_9BACE
Sigma-54 interaction domain protein {ECO:0000313|EMBL:EDM22231.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
two-component system response regulator
L3_082_090G1_scaffold_388_19
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20434..21906
DNA (1473bp) protein (491aa)
Outer membrane efflux protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZCL1_9BACE
Outer membrane efflux protein {ECO:0000313|EMBL:EDM22230.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
outer membrane protein TolC
L3_082_090G1_scaffold_388_20
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21957..23207
DNA (1251bp) protein (417aa)
Efflux transporter, RND family, MFP subunit n=3 Tax=Bacteroides RepID=A5ZCL0_9BACE
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EDM22229.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L3_082_090G1_scaffold_388_21
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23231..25609
DNA (2379bp) protein (793aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U558_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73213.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
multidrug ABC transporter substrate-binding protein
L3_082_090G1_scaffold_388_22
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25622..28021
DNA (2400bp) protein (800aa)
Efflux ABC transporter permease protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5UWU0_9BACE
Efflux ABC transporter permease protein {ECO:0000313|EMBL:CCZ73212.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
multidrug ABC transporter substrate-binding protein
L3_082_090G1_scaffold_388_23
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28060..30456
DNA (2397bp) protein (799aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5UPZ8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73211.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
multidrug ABC transporter substrate-binding protein
L3_082_090G1_scaffold_388_24
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30484..31158
DNA (675bp) protein (225aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I8V595_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73210.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
ABC transporter ATP-binding protein
L3_082_090G1_scaffold_388_25
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31171..33516
DNA (2346bp) protein (782aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5UC67_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73209.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
ABC transporter permease
L3_082_090G1_scaffold_388_26
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33534..35867
DNA (2334bp) protein (778aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9EJV2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY20414.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
ABC-transporter permease
L3_082_090G1_scaffold_388_27
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35891..38302
DNA (2412bp) protein (804aa)
Efflux ABC transporter, permease protein n=2 Tax=root RepID=A5ZCK2_9BACE
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EDM22221.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L3_082_090G1_scaffold_388_28
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38388..38762
DNA (375bp) protein (125aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I9PUS2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73206.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L3_082_090G1_scaffold_388_29
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38791..39138
DNA (348bp) protein (116aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=A5ZCK0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73205.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L3_082_090G1_scaffold_388_30
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(39243..40427)
DNA (1185bp) protein (395aa)
8-amino-7-oxononanoate synthase n=3 Tax=Bacteroides RepID=I9PVG1_9BACE
8-amino-7-oxononanoate synthase {ECO:0000313|EMBL:EIY20418.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
8-amino-7-oxononanoate synthase
Displaying items 1-30 of 51 in total

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