ggKbase home page

L3_082_090G1_scaffold_426

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_082_090G1_scaffold_426_1
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(279..1139)
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Bacteroides ovatus CL03T12C18 RepID=I9I8F1_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY69284.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
Predicted periplasmic protein (DUF2233).
L3_082_090G1_scaffold_426_2
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1181..3181)
DNA (2001bp) protein (667aa)
Uncharacterized protein n=1 Tax=Bacteroides ovatus CL03T12C18 RepID=I9TJM8_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY69283.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
hypothetical protein
L3_082_090G1_scaffold_426_3
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3193..4941)
DNA (1749bp) protein (583aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=E5C799_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY69282.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
SusD family.
L3_082_090G1_scaffold_426_4
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4963..8520)
DNA (3558bp) protein (1186aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Bacteroides ovatus CL03T12C18 RepID=I9TJ13_BACOV
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EIY69281.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
SusC/RagA family TonB-linked outer membrane protein
L3_082_090G1_scaffold_426_5
Bacteroides sp. D2, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8694..9629)
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. D2 RepID=E5C7A1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFS30936.1}; TaxID=556259 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D2.;"
Fe2+-dicitrate sensor, membrane component
L3_082_090G1_scaffold_426_6
Bacteroides sp. D2, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9809..10339)
DNA (531bp) protein (177aa)
RNA polymerase sigma-70 factor, expansion family 1 n=1 Tax=Bacteroides sp. D2 RepID=E5C7A2_9BACE
RNA polymerase sigma-70 factor, expansion family 1 {ECO:0000313|EMBL:EFS30937.2}; TaxID=556259 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D2.;"
RNA polymerase sigma factor, sigma-70 family/RNA polymerase sigma-70 factor, Bacteroides expansion family 1
L3_082_090G1_scaffold_426_7
Bacteroides sp. 2_2_4, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10572..12290
DNA (1719bp) protein (573aa)
Single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:EEO57326.1}; EC=3.1.-.- {ECO:0000313|EMBL:EEO57326.1};; TaxID=469590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_2_4.;"
exonuclease RecJ (EC:3.1.-.-)
Single-stranded-DNA-specific exonuclease RecJ n=1 Tax=Bacteroides sp. 2_2_4 RepID=C3QZE2_9BACE
L3_082_090G1_scaffold_426_8
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12283..14193
DNA (1911bp) protein (637aa)
ATP-dependent DNA helicase, RecQ family protein {ECO:0000313|EMBL:KDS16709.1}; EC=3.6.4.12 {ECO:0000313|EMBL:KDS16709.1};; TaxID=1339286 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3725 D9 ii.;"
RecQ family ATP-dependent DNA helicase n=2 Tax=Bacteroides RepID=E5C7A4_9BACE
ATP-dependent DNA helicase RecQ
L3_082_090G1_scaffold_426_9
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14232..15194
DNA (963bp) protein (321aa)
Tetratricopeptide repeat protein n=4 Tax=Bacteroides RepID=A7LTL7_BACOV
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EDO13164.1}; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
Tetratricopeptide repeat.
L3_082_090G1_scaffold_426_10
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15495..16343
DNA (849bp) protein (283aa)
Prephenate dehydratase {ECO:0000313|EMBL:EDO13163.1}; EC=4.2.1.51 {ECO:0000313|EMBL:EDO13163.1};; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
prephenate dehydratase (EC:4.2.1.51)
Prephenate dehydratase n=7 Tax=Bacteroides RepID=A7LTL6_BACOV
L3_082_090G1_scaffold_426_11
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16318..17496
DNA (1179bp) protein (393aa)
Aminotransferase, class I/II {ECO:0000313|EMBL:EDO13162.1}; EC=2.6.1.- {ECO:0000313|EMBL:EDO13162.1};; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
Aminotransferase, class I/II n=2 Tax=Bacteroides RepID=A7LTL5_BACOV
Aspartate/tyrosine/aromatic aminotransferase
L3_082_090G1_scaffold_426_12
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17584..18645
DNA (1062bp) protein (354aa)
chorismate mutase (EC:2.5.1.54 5.4.99.5)
Phospho-2-dehydro-3-deoxyheptonate aldolase/chorismate mutase n=11 Tax=Bacteroides RepID=D7K7Y5_9BACE
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000313|EMBL:EIY55262.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
L3_082_090G1_scaffold_426_13
Bacteroides sp. D1, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18703..19476
DNA (774bp) protein (258aa)
prephenate dehydrogenase (EC:1.3.1.12 5.4.99.5)
Prephenate dehydrogenase n=10 Tax=Bacteroides RepID=D4VHL0_9BACE
Putative prephenate dehydrogenase {ECO:0000313|EMBL:EEO51351.1}; TaxID=556258 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D1.;"
L3_082_090G1_scaffold_426_14
Bacteroides sp. 2_1_22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19583..21664
DNA (2082bp) protein (694aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|SAAS:SAAS00051044}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|SAAS:SAAS00051045};; TaxID=469588 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_22.;"
DNA primase n=6 Tax=Bacteroides RepID=C3QZD5_9BACE
DNA primase
L3_082_090G1_scaffold_426_15
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21694..22284)
DNA (591bp) protein (197aa)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|HAMAP-Rule:MF_00223}; TaxID=1339286 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3725 D9 ii.;"
GTP cyclohydrolase I (EC:3.5.4.16)
GTP cyclohydrolase 1 n=10 Tax=Bacteroides RepID=A7LTL1_BACOV
L3_082_090G1_scaffold_426_16
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22292..22735)
DNA (444bp) protein (148aa)
Sporulation and cell division repeat protein n=10 Tax=Bacteroides RepID=A7LTL0_BACOV
Putative uncharacterized protein {ECO:0000313|EMBL:EFI36867.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
Sporulation related domain.
L3_082_090G1_scaffold_426_17
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22876..23631)
DNA (756bp) protein (252aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=702447 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens SD CC 1b.;"
triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase n=10 Tax=Bacteroides RepID=A7LTK9_BACOV
L3_082_090G1_scaffold_426_18
Bacteroides sp. D1, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23739..25097)
DNA (1359bp) protein (453aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=C3QHB2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEO51346.2}; TaxID=556258 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D1.;"
hypothetical protein
L3_082_090G1_scaffold_426_19
Bacteroides sp. D2, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25087..25650)
DNA (564bp) protein (188aa)
Uncharacterized protein n=10 Tax=Bacteroides RepID=C3QHB1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFS30950.2}; TaxID=556259 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D2.;"
Domain of Unknown Function (DUF1599).
L3_082_090G1_scaffold_426_20
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25752..26624)
DNA (873bp) protein (291aa)
Peptidase, M23 family n=11 Tax=Bacteroides RepID=A7LTK6_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EGN02433.1}; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
peptidase
L3_082_090G1_scaffold_426_21
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26645..27109)
DNA (465bp) protein (155aa)
Nucleoside diphosphate kinase {ECO:0000256|RuleBase:RU004013}; EC=2.7.4.6 {ECO:0000256|RuleBase:RU004013};; TaxID=1339286 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3725 D9 ii.;"
nucleoside diphosphate kinase (EC:2.7.4.6)
Nucleoside diphosphate kinase n=9 Tax=Bacteroides RepID=C3QHA9_9BACE
L3_082_090G1_scaffold_426_22
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27333..29429)
DNA (2097bp) protein (699aa)
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:CDM07518.1}; EC=3.6.1.- {ECO:0000313|EMBL:CDM07518.1};; TaxID=702447 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens SD CC 1b.;"
ATP-dependent DNA helicase RecG (EC:3.6.1.-)
ATP-dependent DNA helicase RecG n=4 Tax=Bacteroides RepID=C3QHA8_9BACE
L3_082_090G1_scaffold_426_23
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29430..30089)
DNA (660bp) protein (220aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108};; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000256|HAMAP-Rule:MF_00108}; MEP cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC:2.7.7.60)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=8 Tax=Bacteroides RepID=A7LTK2_BACOV
L3_082_090G1_scaffold_426_24
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30097..30648)
DNA (552bp) protein (184aa)
DJ-1 family protein n=10 Tax=Bacteroides RepID=A7LTK1_BACOV
DJ-1 family protein {ECO:0000313|EMBL:EIY69261.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
DJ-1 family protein
L3_082_090G1_scaffold_426_25
Bacteroides sp. D1, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30676..31551)
DNA (876bp) protein (292aa)
TonB family domain protein n=4 Tax=Bacteroides RepID=C3QHA5_9BACE
TonB family domain protein {ECO:0000313|EMBL:EEO51339.1}; TaxID=556258 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D1.;"
TonB family C-terminal domain
L3_082_090G1_scaffold_426_26
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31558..31974)
DNA (417bp) protein (139aa)
Transport energizing protein, ExbD/TolR family n=1 Tax=Bacteroides sp. 2_2_4 RepID=C3QZC3_9BACE
Biopolymer transport ExbD/TolR family protein {ECO:0000313|EMBL:EXY33443.1}; TaxID=1339284 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3397 T10.;"
putative tansport related protein
L3_082_090G1_scaffold_426_27
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31982..32698)
DNA (717bp) protein (239aa)
Transporter, MotA/TolQ/ExbB proton channel family protein n=6 Tax=Bacteroides RepID=A7LTJ8_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EGN02440.1}; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
outer membrane transport energization protein ExbB (TC 2.C.1.1.1)
L3_082_090G1_scaffold_426_28
Bacteroides sp. 2_1_22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32695..33411)
DNA (717bp) protein (239aa)
Pyridoxine 5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00279, ECO:0000256|SAAS:SAAS00088558}; Short=PNP synthase {ECO:0000256|HAMAP-Rule:MF_00279};; EC=2.6.99.2 {ECO:0000256|HAMAP-Rule:MF_00279, ECO:0000256|SAAS:SAAS00088588};; TaxID=469588 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_22.;"
pyridoxine 5'-phosphate synthase (EC:2.6.99.2)
Pyridoxine 5'-phosphate synthase n=10 Tax=Bacteroides RepID=A7LTJ7_BACOV
L3_082_090G1_scaffold_426_29
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33560..34429
DNA (870bp) protein (290aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; TaxID=1339346 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus str. 3725 D1 iv.;"
Predicted sugar kinase (EC:2.7.1.23)
Probable inorganic polyphosphate/ATP-NAD kinase n=8 Tax=Bacteroides RepID=D7K7W8_9BACE
L3_082_090G1_scaffold_426_30
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34882..35016
DNA (135bp) protein (45aa)
Uncharacterized protein {ECO:0000313|EMBL:CDM07510.1}; TaxID=702447 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens SD CC 1b.;"
Displaying items 1-30 of 34 in total

View Taxonomy