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L3_082_090G1_scaffold_465

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_082_090G1_scaffold_465_1
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2..214
DNA (213bp) protein (71aa)
50S ribosomal protein L27 n=14 Tax=Bacteroides RepID=RL27_BACFN
rpmA; putative 50S ribosomal protein L27
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=1339329 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S23L17.;"
L3_082_090G1_scaffold_465_2
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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371..1645
DNA (1275bp) protein (425aa)
serS; putative seryl-tRNA synthetase (EC:6.1.1.11)
Serine--tRNA ligase {ECO:0000313|EMBL:EXZ54921.1}; EC=6.1.1.11 {ECO:0000313|EMBL:EXZ54921.1};; TaxID=1339299 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3397 T14.;"
Seryl-tRNA synthetase n=12 Tax=Bacteroides RepID=Q64XL9_BACFR
L3_082_090G1_scaffold_465_3
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1845..3056
DNA (1212bp) protein (404aa)
Glucose/galactose transporter WARNING n=4 Tax=Bacteroides RepID=E4VV70_BACFG
putative sugar transporter
Glucose/galactose transporter WARNING family protein {ECO:0000313|EMBL:EYE47010.1}; TaxID=1339329 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S23L17.;"
L3_082_090G1_scaffold_465_4
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3199..5487
DNA (2289bp) protein (763aa)
Glutamate synthase (NADPH), homotetrameric {ECO:0000313|EMBL:EXY85822.1}; EC=1.4.1.13 {ECO:0000313|EMBL:EXY85822.1};; TaxID=1339283 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3996 N(B) 6.;"
Glutamate synthase (NADPH), homotetrameric n=2 Tax=Bacteroides RepID=C6I577_9BACE
putative NADPH-dependent glutamate synthase
L3_082_090G1_scaffold_465_5
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(5670..6023)
DNA (354bp) protein (118aa)
Aspartate 1-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097809}; EC=4.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097718};; Aspartate alpha-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446}; TaxID=1339335 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3-F-2 #6.;"
Aspartate 1-decarboxylase n=15 Tax=Bacteroides RepID=PAND_BACFN
aspartate 1-decarboxylase precursor
L3_082_090G1_scaffold_465_6
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(6046..6894)
DNA (849bp) protein (283aa)
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158};; Pantoate--beta-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00158}; Pantoate-activating enzyme {ECO:0000256|HAMAP-Rule:MF_00158}; TaxID=1339276 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. DS-208.;"
Pantothenate synthetase n=4 Tax=Bacteroides RepID=D1JJA3_9BACE
panC; putative pantoate--beta-alanine ligase
L3_082_090G1_scaffold_465_7
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6982..7965
DNA (984bp) protein (328aa)
glycogen synthase (UDP-glucose) (EC:2.4.1.21)
Uncharacterized protein n=4 Tax=Bacteroides RepID=I9B798_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EKA87540.1}; TaxID=1073387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 615.;"
L3_082_090G1_scaffold_465_8
Bacteroides sp. 2_1_16, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7989..9479
DNA (1491bp) protein (497aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=D1JJA1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEZ26438.1}; TaxID=469587 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_16.;"
hypothetical protein
L3_082_090G1_scaffold_465_9
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(9865..11253)
DNA (1389bp) protein (463aa)
Uncharacterized protein n=8 Tax=Bacteroides RepID=I8WUY5_BACFG
putative glycosyl hydrolase
Uncharacterized protein {ECO:0000313|EMBL:EIY50142.1}; TaxID=997878 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL03T00C08.;"
L3_082_090G1_scaffold_465_10
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(11266..12528)
DNA (1263bp) protein (421aa)
Glycosyltransferase, group 1 family protein n=14 Tax=Bacteroides RepID=D1JJ99_9BACE
putative glycosyl transferase
Glycosyl transferases group 1 family protein {ECO:0000313|EMBL:EXZ29785.1}; TaxID=1339327 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S36L11.;"
L3_082_090G1_scaffold_465_11
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12555..14495)
DNA (1941bp) protein (647aa)
Uncharacterized protein n=12 Tax=Bacteroides RepID=E1WMC4_BACF6
hypothetical protein
Glycogen debranching enzyme N terminal family protein {ECO:0000313|EMBL:EXZ06626.1}; TaxID=1339276 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. DS-208.;"
L3_082_090G1_scaffold_465_12
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14666..15343
DNA (678bp) protein (226aa)
Peptidase, S54 family n=1 Tax=Bacteroides sp. 2_1_16 RepID=D1JJ97_9BACE
Rhomboid family protein {ECO:0000313|EMBL:EXY91816.1}; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
putative transmembrane protein
L3_082_090G1_scaffold_465_13
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(15381..15977)
DNA (597bp) protein (199aa)
Uncharacterized protein n=18 Tax=Bacteroides RepID=Q64XN0_BACFR
putative transmembrane protein
UPF0056 membrane protein {ECO:0000256|RuleBase:RU362048}; TaxID=1339283 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3996 N(B) 6.;"
L3_082_090G1_scaffold_465_14
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16093..16836
DNA (744bp) protein (248aa)
CRP family transcription regulator n=6 Tax=Bacteroides RepID=Q64XN1_BACFR
putative FNR-like protein
Uncharacterized protein {ECO:0000313|EMBL:EKA87547.1}; TaxID=1073387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 615.;"
L3_082_090G1_scaffold_465_15
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16849..17283)
DNA (435bp) protein (145aa)
Uncharacterized protein n=14 Tax=Bacteroides RepID=Q64XN2_BACFR
putative outer membrane protein
Secretin and TonB N terminus short domain protein {ECO:0000313|EMBL:EYE56143.1}; TaxID=1339318 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S6L5.;"
L3_082_090G1_scaffold_465_16
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17475..18581)
DNA (1107bp) protein (369aa)
Uncharacterized protein n=11 Tax=Bacteroides RepID=C6I589_9BACE
putative anti-sigma factor
FecR family protein {ECO:0000313|EMBL:EYE46997.1}; TaxID=1339329 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S23L17.;"
L3_082_090G1_scaffold_465_17
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18691..19272)
DNA (582bp) protein (194aa)
RNA polymerase ECF-type sigma factor n=11 Tax=Bacteroides RepID=Q64XN4_BACFR
putative RNA polymerase ECF-type sigma factor
RNA polymerase sigma factor, sigma-70 family protein {ECO:0000313|EMBL:EXY91780.1}; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
L3_082_090G1_scaffold_465_18
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19298..20533)
DNA (1236bp) protein (412aa)
Cys/Met metabolism PLP-dependent enzyme n=4 Tax=Bacteroides RepID=D1JJ91_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDD38301.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
putative O-acetylhomoserine synthase
L3_082_090G1_scaffold_465_19
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20565..21749)
DNA (1185bp) protein (395aa)
Cystathionine beta-lyase PatB {ECO:0000313|EMBL:EXZ45878.1}; EC=4.4.1.8 {ECO:0000313|EMBL:EXZ45878.1};; TaxID=1339280 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 2-F-2 #4.;"
Cystathionine beta-lyase PatB n=10 Tax=Bacteroides RepID=D1JJ90_9BACE
patB; putative aminotransferase
L3_082_090G1_scaffold_465_20
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21921..22706
DNA (786bp) protein (262aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=Q64XN7_BACFR
putative haloacid dehalogenase-like hydrolase
Putative haloacid dehalogenase-like hydrolase {ECO:0000313|EMBL:EYE46993.1}; TaxID=1339329 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S23L17.;"
L3_082_090G1_scaffold_465_21
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22708..24708
DNA (2001bp) protein (667aa)
Uncharacterized protein n=12 Tax=Bacteroides RepID=C6I594_9BACE
putative helicase protein
TPR repeat family protein {ECO:0000313|EMBL:EYE56137.1}; TaxID=1339318 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S6L5.;"
L3_082_090G1_scaffold_465_22
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25008..26138
DNA (1131bp) protein (377aa)
Site-specific recombinase, phage integrase family n=9 Tax=Bacteroides RepID=C6Z0P7_9BACE
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EFR51991.1}; TaxID=457424 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis 3_1_12.;"
recombinase
L3_082_090G1_scaffold_465_23
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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26396..27040
DNA (645bp) protein (215aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=E4VQR1_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EFR51992.1}; TaxID=457424 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis 3_1_12.;"
hypothetical protein
L3_082_090G1_scaffold_465_24
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27239..27613
DNA (375bp) protein (125aa)
DNA binding domain, excisionase family n=13 Tax=root RepID=B3JIJ1_9BACE
DNA binding domain, excisionase family {ECO:0000313|EMBL:EFR51993.1}; TaxID=457424 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis 3_1_12.;"
excisionase
L3_082_090G1_scaffold_465_25
Bacteroides eggerthii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27591..28715
DNA (1125bp) protein (375aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=C6Z0Q0_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EEC54498.1}; TaxID=483216 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides eggerthii DSM 20697.;"
hypothetical protein
L3_082_090G1_scaffold_465_26
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28797..29684
DNA (888bp) protein (296aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=E4VQR4_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EFR51995.1}; TaxID=457424 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis 3_1_12.;"
DNA primase
L3_082_090G1_scaffold_465_27
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29925..30371
DNA (447bp) protein (149aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=C6Z0Q2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EXY91785.1}; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
hypothetical protein
L3_082_090G1_scaffold_465_28
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30424..30750)
DNA (327bp) protein (109aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=G1ULX9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY30672.1}; TaxID=997876 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei CL02T12C06.;"
L3_082_090G1_scaffold_465_29
Bacteroides cellulosilyticus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30798..31052
DNA (255bp) protein (85aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=I8V326_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY19538.1}; TaxID=997874 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides cellulosilyticus CL02T12C19.;"
conjugate transposon protein TraE
L3_082_090G1_scaffold_465_30
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31594..33405
DNA (1812bp) protein (604aa)
Group II intron-encoded protein LtrA n=4 Tax=Bacteroides RepID=E4W3C6_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EPH17204.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
RNA-directed DNA polymerase (Reverse transcriptase)
Displaying items 1-30 of 32 in total

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