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L3_082_090G1_scaffold_478

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_082_090G1_scaffold_478_1
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2..478
DNA (477bp) protein (159aa)
30S ribosomal protein S16 n=4 Tax=Bacteroides RepID=C3QYC2_9BACE
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
SSU ribosomal protein S16P
L3_082_090G1_scaffold_478_2
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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656..1651
DNA (996bp) protein (332aa)
Transcriptional regulator, GntR family n=5 Tax=Bacteroides RepID=A7M168_BACOV
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EDO10403.1}; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
FucR
L3_082_090G1_scaffold_478_3
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1720..3495
DNA (1776bp) protein (592aa)
L-fucose isomerase {ECO:0000256|HAMAP-Rule:MF_01254, ECO:0000256|SAAS:SAAS00040911}; Short=FucIase {ECO:0000256|HAMAP-Rule:MF_01254};; EC=5.3.1.25 {ECO:0000256|HAMAP-Rule:MF_01254, ECO:0000256|SAAS:SAAS00040955};; 6-deoxy-L-galactose isomerase {ECO:0000256|HAMAP-Rule:MF_01254}; TaxID=1339286 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3725 D9 ii.;"
L-fucose isomerase (EC:5.3.1.25)
L-fucose isomerase n=4 Tax=Bacteroides RepID=C3QYC0_9BACE
L3_082_090G1_scaffold_478_4
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3625..4263
DNA (639bp) protein (213aa)
Class II Aldolase and Adducin domain protein n=2 Tax=Bacteroides RepID=A7M170_BACOV
L-fuculose-1-phosphate aldolase {ECO:0000313|EMBL:KDS13002.1}; TaxID=1339346 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus str. 3725 D1 iv.;"
Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases
L3_082_090G1_scaffold_478_5
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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4281..5711
DNA (1431bp) protein (477aa)
Sugar (pentulose and hexulose) kinases (EC:2.7.1.5 2.7.1.51)
Carbohydrate kinase, FGGY family protein n=2 Tax=Bacteroides RepID=D4WAJ0_BACOV
Rhamnulokinase {ECO:0000313|EMBL:EIY68263.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
L3_082_090G1_scaffold_478_6
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5718..6110
DNA (393bp) protein (131aa)
hypothetical protein (EC:5.1.3.-)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A7M172_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY64045.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
L3_082_090G1_scaffold_478_7
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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6129..7439
DNA (1311bp) protein (437aa)
L-fucose:H+ symporter permease n=6 Tax=Bacteroides RepID=A7M173_BACOV
H+ symporter permease {ECO:0000313|EMBL:KDS13005.1}; TaxID=1339346 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus str. 3725 D1 iv.;"
L-fucose:H+ symporter permease
L3_082_090G1_scaffold_478_8
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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7682..8233
DNA (552bp) protein (184aa)
RNA polymerase sigma-70 factor, expansion family 1 n=2 Tax=Bacteroides RepID=I8YYM9_BACOV
RNA polymerase sigma-70 factor, expansion family 1 {ECO:0000313|EMBL:EIY68260.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
RNA polymerase ECF-type sigma factor
L3_082_090G1_scaffold_478_9
Bacteroides sp. 2_2_4, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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8290..9276
DNA (987bp) protein (329aa)
Sigma factor regulatory protein, FecR/PupR family n=1 Tax=Bacteroides sp. 2_2_4 RepID=C3QYB4_9BACE
Sigma factor regulatory protein, FecR/PupR family {ECO:0000313|EMBL:EEO56948.1}; TaxID=469590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_2_4.;"
anti-sigma factor
L3_082_090G1_scaffold_478_10
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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9421..12759
DNA (3339bp) protein (1113aa)
Putative outer membrane protein n=1 Tax=Bacteroides sp. 3_1_23 RepID=D7K9Y6_9BACE
Putative outer membrane protein {ECO:0000313|EMBL:EFI36626.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
hypothetical protein
L3_082_090G1_scaffold_478_11
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12764..14359
DNA (1596bp) protein (532aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I9TG86_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY68256.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
hypothetical protein
L3_082_090G1_scaffold_478_12
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14384..15418
DNA (1035bp) protein (345aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=I8YYM4_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY68255.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
hypothetical protein
L3_082_090G1_scaffold_478_13
Bacteroides ovatus CAG:22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15433..16668
DNA (1236bp) protein (412aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=C3QYB0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDB57228.1}; TaxID=1263050 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides ovatus CAG:22.;"
hypothetical protein
L3_082_090G1_scaffold_478_14
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16696..18249
DNA (1554bp) protein (518aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A7M181_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EDO10416.1}; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
Glycosyl hydrolases family 18.
L3_082_090G1_scaffold_478_15
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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18935..20632
DNA (1698bp) protein (566aa)
Transcriptional regulator, AraC family n=8 Tax=Bacteroides RepID=A7M182_BACOV
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EDO10417.1}; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
AraC-type DNA-binding domain-containing proteins
L3_082_090G1_scaffold_478_16
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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20805..21464
DNA (660bp) protein (220aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=A7M183_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY68251.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
hypothetical protein
L3_082_090G1_scaffold_478_17
Bacteroides sp. 2_2_4, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21583..22281
DNA (699bp) protein (233aa)
Uncharacterized protein n=8 Tax=Bacteroides RepID=A7M184_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EEO56940.1}; TaxID=469590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_2_4.;"
Predicted DNA alkylation repair enzyme
L3_082_090G1_scaffold_478_18
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(22403..23755)
DNA (1353bp) protein (451aa)
Bacterial extracellular solute-binding protein n=7 Tax=Bacteroides RepID=D4WAK4_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EGM96531.1}; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
Spermidine/putrescine-binding periplasmic protein
L3_082_090G1_scaffold_478_19
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(23767..24561)
DNA (795bp) protein (265aa)
ABC transporter, permease protein n=9 Tax=Bacteroides RepID=A7LQL4_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY68248.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
putrescine transport system permease potI
L3_082_090G1_scaffold_478_20
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(24555..25355)
DNA (801bp) protein (267aa)
ABC transporter, permease protein n=6 Tax=Bacteroides RepID=C3QYA3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY68247.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
putrescine transport system permease potH
L3_082_090G1_scaffold_478_21
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25367..26758)
DNA (1392bp) protein (464aa)
Polyamine-transporting ATPase {ECO:0000256|SAAS:SAAS00035095}; EC=3.6.3.31 {ECO:0000256|SAAS:SAAS00035095};; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
spermidine/putrescine ABC transporter ATP-binding subunit (EC:3.6.3.31)
Polyamine ABC transporter, ATP-binding protein n=7 Tax=Bacteroides RepID=A7LQL2_BACOV
L3_082_090G1_scaffold_478_22
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26897..28000
DNA (1104bp) protein (368aa)
Antioxidant, AhpC/TSA family n=5 Tax=Bacteroides RepID=C3QYA1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY64028.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
Peroxiredoxin
L3_082_090G1_scaffold_478_23
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28211..30775)
DNA (2565bp) protein (855aa)
alpha-glucan phosphorylases (EC:2.4.1.1)
Alpha-glucan phosphorylase n=9 Tax=Bacteroides RepID=A7LQL0_BACOV
Maltodextrin phosphorylase {ECO:0000313|EMBL:EFI36639.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
L3_082_090G1_scaffold_478_24
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30813..32495)
DNA (1683bp) protein (561aa)
Glycogen synthase n=1 Tax=Bacteroides sp. D22 RepID=D7JA26_9BACE
Putative glycogen synthase {ECO:0000313|EMBL:EFI36640.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
Glycosyltransferase
Displaying 24 items

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