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L3_082_090G1_scaffold_484

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_082_090G1_scaffold_484_1
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(576..1460)
DNA (885bp) protein (295aa)
adenine-specific DNA-methyltransferase (EC:2.1.1.72)
N-6 DNA Methylase n=1 Tax=Phascolarctobacterium succinatutens YIT 12067 RepID=E8LF93_9FIRM
N-6 DNA Methylase {ECO:0000313|EMBL:EFY04492.1}; TaxID=626939 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens YIT 12067.;"
L3_082_090G1_scaffold_484_2
unknown

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comp(1647..2429)
DNA (783bp) protein (261aa)

This feature has no annotations

L3_082_090G1_scaffold_484_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2433..4229)
DNA (1797bp) protein (599aa)
Uncharacterized conserved protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K3F1_9FIRM
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:CBK98044.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_082_090G1_scaffold_484_4
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(4358..4750)
DNA (393bp) protein (131aa)
Type I site-specific restriction-modification system, R (restriction) subunit and related helicases (EC:3.1.21.3)
Helicase protein n=1 Tax=Phascolarctobacterium succinatutens CAG:287 RepID=R6X1G4_9FIRM
Helicase protein {ECO:0000313|EMBL:CDD10101.1}; TaxID=1263101 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens CAG:287.;"
L3_082_090G1_scaffold_484_5
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(4970..5419)
DNA (450bp) protein (150aa)
YqeY-like protein n=1 Tax=Phascolarctobacterium succinatutens YIT 12067 RepID=E8LF95_9FIRM
YqeY-like protein {ECO:0000313|EMBL:EFY04494.1}; TaxID=626939 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens YIT 12067.;"
hypothetical protein
L3_082_090G1_scaffold_484_6
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(5435..5611)
DNA (177bp) protein (59aa)
30S ribosomal protein S21 n=2 Tax=Phascolarctobacterium succinatutens RepID=E8LF96_9FIRM
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=626939 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens YIT 12067.;"
30S ribosomal protein S21
L3_082_090G1_scaffold_484_7
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(5730..6068)
DNA (339bp) protein (113aa)
Histidine triad domain protein n=2 Tax=Phascolarctobacterium succinatutens RepID=E8LF97_9FIRM
Histidine triad domain protein {ECO:0000313|EMBL:EFY04496.1}; TaxID=626939 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens YIT 12067.;"
histidine triad (HIT) protein
L3_082_090G1_scaffold_484_8
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(6155..7468)
DNA (1314bp) protein (438aa)
tRNA methylthiotransferase YqeV n=1 Tax=Phascolarctobacterium succinatutens CAG:287 RepID=R6X1F8_9FIRM
tRNA methylthiotransferase YqeV {ECO:0000313|EMBL:CDD10096.1}; TaxID=1263101 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens CAG:287.;"
RNA modification enzyme
L3_082_090G1_scaffold_484_9
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(7475..8218)
DNA (744bp) protein (248aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=626939 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens YIT 12067.;"
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Phascolarctobacterium succinatutens YIT 12067 RepID=E8LF99_9FIRM
hypothetical protein
L3_082_090G1_scaffold_484_10
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(8578..9510)
DNA (933bp) protein (311aa)
Ribosomal protein L11 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189466}; Short=L11 Mtase {ECO:0000256|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189468};; TaxID=1263101 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens CAG:287.;"
Ribosomal protein L11 methyltransferase n=1 Tax=Phascolarctobacterium succinatutens CAG:287 RepID=R6XV07_9FIRM
50S ribosomal protein L11 methyltransferase
L3_082_090G1_scaffold_484_11
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

9686..11002
DNA (1317bp) protein (439aa)
Membrane protein putative n=1 Tax=Phascolarctobacterium succinatutens CAG:287 RepID=R6X7H8_9FIRM
Membrane protein putative {ECO:0000313|EMBL:CDD12291.1}; TaxID=1263101 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens CAG:287.;"
hypothetical protein
L3_082_090G1_scaffold_484_12
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

11105..12322
DNA (1218bp) protein (406aa)
L-threonine ammonia-lyase (EC:4.3.1.19)
Threonine ammonia-lyase n=1 Tax=Phascolarctobacterium succinatutens CAG:287 RepID=R6WM93_9FIRM
Threonine ammonia-lyase {ECO:0000313|EMBL:CDD12293.1}; TaxID=1263101 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens CAG:287.;"
L3_082_090G1_scaffold_484_13
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(12396..14234)
DNA (1839bp) protein (613aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; TaxID=1263101 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens CAG:287.;"
glutamine--fructose-6-phosphate transaminase (EC:2.6.1.16)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Phascolarctobacterium succinatutens CAG:287 RepID=R6WSE0_9FIRM
L3_082_090G1_scaffold_484_14
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(14276..15292)
DNA (1017bp) protein (339aa)
UDP-glucose 4-epimerase {ECO:0000313|EMBL:EFY04503.1}; EC=5.1.3.2 {ECO:0000313|EMBL:EFY04503.1};; TaxID=626939 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens YIT 12067.;"
UDP-glucose 4-epimerase n=1 Tax=Phascolarctobacterium succinatutens YIT 12067 RepID=E8LFA4_9FIRM
UDP-glucose 4-epimerase
L3_082_090G1_scaffold_484_15
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(15411..15995)
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium succinatutens YIT 12067 RepID=E8LFA5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFY04504.1}; TaxID=626939 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens YIT 12067.;"
hypothetical protein
L3_082_090G1_scaffold_484_16
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(16012..16812)
DNA (801bp) protein (267aa)
Putative uridine phosphorylase n=1 Tax=Phascolarctobacterium succinatutens YIT 12067 RepID=E8LFA6_9FIRM
Putative uridine phosphorylase {ECO:0000313|EMBL:EFY04505.1}; TaxID=626939 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens YIT 12067.;"
purine or other phosphorylase family 1
L3_082_090G1_scaffold_484_17
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(16827..18050)
DNA (1224bp) protein (408aa)
Phosphopentomutase {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00010015}; EC=5.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00009998};; Phosphodeoxyribomutase {ECO:0000256|HAMAP-Rule:MF_00740}; TaxID=1263101 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens CAG:287.;"
phosphopentomutase (EC:5.4.2.7)
Phosphopentomutase n=1 Tax=Phascolarctobacterium succinatutens CAG:287 RepID=R6Y1C8_9FIRM
L3_082_090G1_scaffold_484_18
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(18116..18754)
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium succinatutens YIT 12067 RepID=E8LFA8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFY04507.1}; TaxID=626939 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens YIT 12067.;"
hypothetical protein
L3_082_090G1_scaffold_484_19
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(18792..19343)
DNA (552bp) protein (184aa)
uracil phosphoribosyltransferase (EC:2.4.2.9)
Bifunctional protein PyrR n=1 Tax=Phascolarctobacterium succinatutens CAG:287 RepID=R6WZG0_9FIRM
Bifunctional protein PyrR {ECO:0000256|HAMAP-Rule:MF_01219}; TaxID=1263101 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens CAG:287.;"
L3_082_090G1_scaffold_484_20
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(19413..20357)
DNA (945bp) protein (315aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=626939 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens YIT 12067.;"
Pseudouridine synthase n=1 Tax=Phascolarctobacterium succinatutens YIT 12067 RepID=E8LFB0_9FIRM
RluA family pseudouridine synthase
L3_082_090G1_scaffold_484_21
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(20315..20764)
DNA (450bp) protein (150aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112541}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112508};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=1263101 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens CAG:287.;"
lspA; signal peptidase II (EC:3.4.23.36)
Lipoprotein signal peptidase n=1 Tax=Phascolarctobacterium succinatutens CAG:287 RepID=R6X7I9_9FIRM
L3_082_090G1_scaffold_484_22
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(20889..22283)
DNA (1395bp) protein (465aa)
Amino acid carrier protein n=1 Tax=Phascolarctobacterium succinatutens CAG:287 RepID=R6Y1D5_9FIRM
Amino acid carrier protein {ECO:0000313|EMBL:CDD12307.1}; TaxID=1263101 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens CAG:287.;"
amino acid carrier protein
L3_082_090G1_scaffold_484_23
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(22443..23105)
DNA (663bp) protein (221aa)
Predicted membrane protein n=1 Tax=Phascolarctobacterium succinatutens CAG:287 RepID=R6WQR0_9FIRM
Predicted membrane protein {ECO:0000313|EMBL:CDD11710.1}; TaxID=1263101 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens CAG:287.;"
hypothetical protein
L3_082_090G1_scaffold_484_24
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(23289..23801)
DNA (513bp) protein (171aa)
ATP/cobalamin adenosyltransferase (EC:2.5.1.17)
ATP:cob(I)alamin adenosyltransferase n=1 Tax=Phascolarctobacterium succinatutens CAG:287 RepID=R6WZG6_9FIRM
ATP:cob(I)alamin adenosyltransferase {ECO:0000313|EMBL:CDD12309.1}; TaxID=1263101 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens CAG:287.;"
L3_082_090G1_scaffold_484_25
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(23874..24287)
DNA (414bp) protein (138aa)
Nucleoside diphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00451, ECO:0000256|RuleBase:RU004013}; Short=NDK {ECO:0000256|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000256|HAMAP-Rule:MF_00451};; EC=2.7.4.6 {ECO:0000256|HAMAP-Rule:MF_00451, ECO:0000256|RuleBase:RU004013};; Nucleoside-2-P kinase {ECO:0000256|HAMAP-Rule:MF_00451}; TaxID=1263101 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens CAG:287.;"
ndk; nucleoside diphosphate kinase (EC:2.7.4.6)
Nucleoside diphosphate kinase n=2 Tax=Phascolarctobacterium succinatutens RepID=E8LFB4_9FIRM
L3_082_090G1_scaffold_484_26
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(24369..25211)
DNA (843bp) protein (281aa)
Protease HtpX homolog {ECO:0000256|HAMAP-Rule:MF_00188}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_00188};; TaxID=1263101 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens CAG:287.;"
Protease HtpX homolog n=1 Tax=Phascolarctobacterium succinatutens CAG:287 RepID=R6X7J4_9FIRM
peptidase
L3_082_090G1_scaffold_484_27
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(25308..25742)
DNA (435bp) protein (145aa)
Polyketide cyclase/dehydrase n=2 Tax=Phascolarctobacterium succinatutens RepID=E8LFB6_9FIRM
Polyketide cyclase/dehydrase {ECO:0000313|EMBL:CDD12312.1}; TaxID=1263101 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens CAG:287.;"
cyclase/dehydrase
L3_082_090G1_scaffold_484_28
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(25757..27004)
DNA (1248bp) protein (416aa)
Acetylornithine/succinyldiaminopimelate aminotransferase (EC:2.6.1.82)
Putrescine aminotransferase n=1 Tax=Phascolarctobacterium succinatutens CAG:287 RepID=R6WMB2_9FIRM
Putrescine aminotransferase {ECO:0000313|EMBL:CDD12313.1}; TaxID=1263101 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens CAG:287.;"
L3_082_090G1_scaffold_484_29
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(27384..28655)
DNA (1272bp) protein (424aa)
Divergent polysaccharide deacetylase n=1 Tax=Phascolarctobacterium succinatutens YIT 12067 RepID=E8LFB8_9FIRM
Divergent polysaccharide deacetylase {ECO:0000313|EMBL:EFY04517.1}; TaxID=626939 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens YIT 12067.;"
protein of unknown function DUF610 YibQ
L3_082_090G1_scaffold_484_30
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(28670..29563)
DNA (894bp) protein (298aa)
Tyrosine recombinase XerC n=1 Tax=Phascolarctobacterium succinatutens YIT 12067 RepID=E8LFB9_9FIRM
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=626939 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens YIT 12067.;"
recombinase
Displaying items 1-30 of 34 in total

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