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L3_082_090G1_scaffold_488

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_082_090G1_scaffold_488_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(237..653)
DNA (417bp) protein (139aa)
Uncharacterized protein n=14 Tax=Bifidobacterium RepID=Q8G7Y9_BIFLO
hypothetical protein
PF11253 family protein {ECO:0000313|EMBL:EIJ26324.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L3_082_090G1_scaffold_488_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(769..1650)
DNA (882bp) protein (294aa)
Lon protease (S16) C-terminal proteolytic domain protein {ECO:0000313|EMBL:CCK35310.1}; EC=3.4.21.53 {ECO:0000313|EMBL:CCK35310.1};; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
Lon protease (S16) C-terminal proteolytic domain protein n=1 Tax=Bifidobacterium longum subsp. longum CECT 7347 RepID=T2I2A2_BIFLN
hypothetical protein
L3_082_090G1_scaffold_488_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1871..3616
DNA (1746bp) protein (582aa)
Hydrolase domain protein n=7 Tax=Bifidobacterium RepID=I3AWI6_BIFLN
Hydrolase domain protein {ECO:0000313|EMBL:EIJ26357.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
hypothetical protein
L3_082_090G1_scaffold_488_4
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3689..5263)
DNA (1575bp) protein (525aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
DNA-helicase-II-like protein n=6 Tax=Bifidobacterium RepID=V6Y203_BIFLN
DNA helicase
L3_082_090G1_scaffold_488_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5409..7064
DNA (1656bp) protein (552aa)
Putative aminoglycoside phosphotransferase n=2 Tax=Bifidobacterium longum RepID=B3DQ56_BIFLD
Putative aminoglycoside phosphotransferase {ECO:0000313|EMBL:ACD97555.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
aminoglycoside phosphotransferase
L3_082_090G1_scaffold_488_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7213..7437
DNA (225bp) protein (75aa)
Uncharacterized protein n=9 Tax=Bifidobacterium RepID=B3DQ55_BIFLD
Protein of unknown function (DUF3107).
Putative ATP-binding protein {ECO:0000313|EMBL:CCK35314.1}; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
L3_082_090G1_scaffold_488_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7498..8391)
DNA (894bp) protein (298aa)
Predicted metal-dependent phosphoesterases (PHP family) n=8 Tax=Bifidobacterium RepID=D6DBA0_BIFLN
hypothetical protein
Predicted metal-dependent phosphoesterases (PHP family) {ECO:0000313|EMBL:CBK69771.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L3_082_090G1_scaffold_488_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8399..8647)
DNA (249bp) protein (83aa)
Uncharacterized protein {ECO:0000313|EMBL:BAP83936.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
L3_082_090G1_scaffold_488_9
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8649..9266
DNA (618bp) protein (206aa)
Vitamin K epoxide reductase n=3 Tax=Bifidobacterium RepID=V6XXI9_BIFLN
Predicted membrane protein {ECO:0000313|EMBL:CCY95098.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
hypothetical protein
L3_082_090G1_scaffold_488_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9272..10165)
DNA (894bp) protein (298aa)
Diaminopimelate epimerase {ECO:0000256|SAAS:SAAS00028055, ECO:0000313|EMBL:CBK69773.1}; EC=5.1.1.7 {ECO:0000256|SAAS:SAAS00028063, ECO:0000313|EMBL:CBK69773.1};; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
Diaminopimelate epimerase n=8 Tax=Bifidobacterium RepID=B3DQ52_BIFLD
diaminopimelate epimerase
L3_082_090G1_scaffold_488_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10273..11067
DNA (795bp) protein (265aa)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
Glutamate racemase n=15 Tax=Bifidobacterium RepID=MURI_BIFLD
murI; glutamate racemase
L3_082_090G1_scaffold_488_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11196..12041
DNA (846bp) protein (282aa)
Putative esterase-like protein n=2 Tax=Bifidobacterium longum RepID=B3DQ50_BIFLD
esterase-like protein
Putative esterase-like protein {ECO:0000313|EMBL:ACD97549.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L3_082_090G1_scaffold_488_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12108..13007)
DNA (900bp) protein (300aa)
Membrane protease-like protein n=15 Tax=Bifidobacterium RepID=B3DQ49_BIFLD
hypothetical protein
Membrane protease-like protein {ECO:0000313|EMBL:ACD97548.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L3_082_090G1_scaffold_488_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13167..13436)
DNA (270bp) protein (90aa)
O-acetylhomoserine sulfhydrylase / O-succinylhomoserine sulfhydrylase n=3 Tax=Bifidobacterium longum RepID=S3DIU5_BIFLN
hypothetical protein
Cystathionine beta-lyase {ECO:0000313|EMBL:KEY31249.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L3_082_090G1_scaffold_488_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13500..13856)
DNA (357bp) protein (119aa)
NIL domain protein n=5 Tax=Bifidobacterium longum RepID=C2GW55_BIFLN
ABC transporter
ABC transporter {ECO:0000313|EMBL:KEY21741.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L3_082_090G1_scaffold_488_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13915..14139)
DNA (225bp) protein (75aa)
NADPH-quinone reductase n=14 Tax=Bifidobacterium longum RepID=B3DQ45_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEQ56237.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
L3_082_090G1_scaffold_488_17
unknown

Not on your lists

comp(14139..14495)
DNA (357bp) protein (119aa)

This feature has no annotations

L3_082_090G1_scaffold_488_18
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14544..14795)
DNA (252bp) protein (84aa)
Glutaredoxin n=8 Tax=Bifidobacterium RepID=B3DQ43_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCY95105.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L3_082_090G1_scaffold_488_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15039..16277)
DNA (1239bp) protein (413aa)
Cystathionine beta-lyases/cystathionine gamma-synthases (EC:4.4.1.8)
Cystathionine beta-lyases/cystathionine gamma-synthases n=9 Tax=Bifidobacterium RepID=D6DBB0_BIFLN
Putative cystathionine beta-lyase {ECO:0000313|EMBL:EIJ29858.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
L3_082_090G1_scaffold_488_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16513..17415)
DNA (903bp) protein (301aa)
ABC-type amino acid transport system periplasmic component n=11 Tax=Bifidobacterium RepID=B3DQ41_BIFLD
amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-)
ABC transporter, substrate-binding protein, family 3 {ECO:0000313|EMBL:EIJ26298.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L3_082_090G1_scaffold_488_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17481..18272)
DNA (792bp) protein (264aa)
amino acid ABC transporter ATP-binding protein, PAAT family (TC 3.A.1.3.-) (EC:3.6.3.21)
ABC-type amino acid transport system ATPase component n=7 Tax=Bifidobacterium longum RepID=B3DQ40_BIFLD
ABC-type amino acid transport system ATPase component {ECO:0000313|EMBL:ACD97539.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L3_082_090G1_scaffold_488_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18265..18939)
DNA (675bp) protein (225aa)
ABC transporter, permease protein n=1 Tax=Bifidobacterium longum subsp. longum 44B RepID=I3BEJ4_BIFLN
ABC transporter, permease protein {ECO:0000313|EMBL:EIJ29787.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
amino acid ABC transporter permease
L3_082_090G1_scaffold_488_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18926..19585)
DNA (660bp) protein (220aa)
Permease protein of ABC transporter system n=16 Tax=Bifidobacterium RepID=Q8G809_BIFLO
amino acid ABC transporter permease
Amino acid ABC transporter permease component {ECO:0000313|EMBL:BAJ67039.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L3_082_090G1_scaffold_488_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19813..20463
DNA (651bp) protein (217aa)
Predicted esterase n=6 Tax=Bifidobacterium longum RepID=D6DBB5_BIFLN
esterase
Putative esterase {ECO:0000313|EMBL:BAJ71557.1}; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
L3_082_090G1_scaffold_488_25
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20472..22727)
DNA (2256bp) protein (752aa)
Elongation factor Tu GTP binding domain-containing protein n=1 Tax=Bifidobacterium sp. 12_1_47BFAA RepID=E5XVQ1_9BIFI
Elongation factor Tu GTP binding domain-containing protein {ECO:0000313|EMBL:EFV38310.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
hypothetical protein
L3_082_090G1_scaffold_488_26
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22874..23581
DNA (708bp) protein (236aa)
Exonuclease n=5 Tax=Bifidobacterium RepID=F8AUB1_BIFLN
exonuclease
Putative exonuclease {ECO:0000313|EMBL:BAJ67042.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L3_082_090G1_scaffold_488_27
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23583..24173)
DNA (591bp) protein (197aa)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_00328}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
Guanylate kinase n=17 Tax=Bifidobacterium RepID=KGUA_BIFLO
guanylate kinase
L3_082_090G1_scaffold_488_28
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24353..25273)
DNA (921bp) protein (307aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000313|EMBL:EEQ56225.1}; EC=4.1.1.23 {ECO:0000313|EMBL:EEQ56225.1};; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
Orotidine 5'-phosphate decarboxylase n=17 Tax=Bifidobacterium RepID=F8AUA9_BIFLN
orotidine 5'-phosphate decarboxylase
L3_082_090G1_scaffold_488_29
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25273..28656)
DNA (3384bp) protein (1128aa)
Carbamoyl-phosphate synthase large chain {ECO:0000256|HAMAP-Rule:MF_01210}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01210, ECO:0000313|EMBL:CBK69790.1};; Carbamoyl-phosphate synthetase ammonia chain {ECO:0000256|HAMAP-Rule:MF_01210}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
carbamoyl-phosphate synthase large subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase large chain n=2 Tax=Bifidobacterium longum subsp. longum RepID=D6DBB9_BIFLN
L3_082_090G1_scaffold_488_30
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28658..29881)
DNA (1224bp) protein (408aa)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_01209}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
Carbamoyl-phosphate synthase small chain n=7 Tax=Bifidobacterium RepID=E4R1E9_BIFLM
carbamoyl-phosphate synthase small subunit
Displaying items 1-30 of 33 in total

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