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L3_082_090G1_scaffold_505

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_082_090G1_scaffold_505_1
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(255..461)
DNA (207bp) protein (69aa)
Uncharacterized protein n=8 Tax=Bacteroides RepID=A7LUM0_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY56268.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
hypothetical protein
L3_082_090G1_scaffold_505_2
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(514..999)
DNA (486bp) protein (162aa)
Cold-shock DNA-binding domain protein n=9 Tax=Bacteroides RepID=A7LUM1_BACOV
Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:EFF51837.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
cold-shock DNA-binding protein family
L3_082_090G1_scaffold_505_3
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1053..2177)
DNA (1125bp) protein (375aa)
Superfamily II DNA and RNA helicases (EC:3.6.1.-)
DEAD/DEAH box helicase n=7 Tax=Bacteroides RepID=A7LUM2_BACOV
DEAD/DEAH box helicase {ECO:0000313|EMBL:EDO12707.1}; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
L3_082_090G1_scaffold_505_4
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2267..3340)
DNA (1074bp) protein (358aa)
Oxidoreductase, 2-nitropropane dioxygenase family protein n=3 Tax=Bacteroides RepID=A7LUM3_BACOV
Oxidoreductase, 2-nitropropane dioxygenase family protein {ECO:0000313|EMBL:EDO12708.1}; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
Dioxygenases related to 2-nitropropane dioxygenase
L3_082_090G1_scaffold_505_5
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3712..4011)
DNA (300bp) protein (100aa)
Uncharacterized protein n=9 Tax=Bacteroides RepID=A7LUM4_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY56272.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
RNA-binding proteins (RRM domain)
L3_082_090G1_scaffold_505_6
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4327..4989
DNA (663bp) protein (221aa)
Uracil-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780}; Short=UDG {ECO:0000256|HAMAP-Rule:MF_00148};; EC=3.2.2.27 {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780};; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
Uracil-DNA glycosylase n=5 Tax=Bacteroides RepID=C3QMC7_9BACE
putative uracil-DNA glycosylase
L3_082_090G1_scaffold_505_7
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5037..5810
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Bacteroides ovatus CL03T12C18 RepID=I9SM25_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY56873.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
L3_082_090G1_scaffold_505_8
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5848..6432)
DNA (585bp) protein (195aa)
Putative uncharacterized protein n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WI44_BACOV
Putative uncharacterized protein {ECO:0000313|EMBL:EFF51830.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
Nucleotidyltransferase domain.
L3_082_090G1_scaffold_505_9
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6571..8634
DNA (2064bp) protein (688aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
Superfamily I DNA and RNA helicases (EC:3.6.1.-)
ATP-dependent DNA helicase rep n=1 Tax=Bacteroides sp. D22 RepID=D7J5P6_9BACE
L3_082_090G1_scaffold_505_10
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8722..9018
DNA (297bp) protein (99aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=C3QMD1_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI13176.1}; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
Domain of unknown function (DUF1905).
L3_082_090G1_scaffold_505_11
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9110..10666)
DNA (1557bp) protein (519aa)
Uncharacterized protein n=1 Tax=Bacteroides ovatus ATCC 8483 RepID=A7LUN0_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EDO12715.1}; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
Protein of unknown function (DUF1703)./Predicted AAA-ATPase.
L3_082_090G1_scaffold_505_12
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10814..11434)
DNA (621bp) protein (207aa)
N-acetylmuramoyl-L-alanine amidase n=2 Tax=Bacteroides RepID=C3QMD4_9BACE
N-acetylmuramoyl-L-alanine amidase (T7 lysozyme) {ECO:0000313|EMBL:EFI13174.1}; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
N-acetylmuramoyl-L-alanine amidase.
L3_082_090G1_scaffold_505_13
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11441..11734)
DNA (294bp) protein (98aa)
N-acetylmuramoyl-L-alanine amidase n=2 Tax=Bacteroides RepID=C3QMD4_9BACE
N-acetylmuramoyl-L-alanine amidase (T7 lysozyme) {ECO:0000313|EMBL:EFI13174.1}; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
N-acetylmuramoyl-L-alanine amidase.
L3_082_090G1_scaffold_505_14
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11765..12115)
DNA (351bp) protein (117aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 3_1_23 RepID=D7K570_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KDS22850.1}; TaxID=1339346 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus str. 3725 D1 iv.;"
hypothetical protein
L3_082_090G1_scaffold_505_15
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12201..12719)
DNA (519bp) protein (173aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I8Y3H8_BACOV
DNA-binding family protein {ECO:0000313|EMBL:KDS14969.1}; TaxID=1339286 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3725 D9 ii.;"
DNA-binding protein
L3_082_090G1_scaffold_505_16
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13259..13918)
DNA (660bp) protein (220aa)
Aquaporin Z n=2 Tax=Bacteroides RepID=D7K565_9BACE
MIP channel s family protein {ECO:0000313|EMBL:KDS22855.1}; TaxID=1339346 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus str. 3725 D1 iv.;"
MIP family channel protein
L3_082_090G1_scaffold_505_17
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14025..14366)
DNA (342bp) protein (114aa)
Putative uncharacterized protein n=2 Tax=Bacteroides RepID=D7K564_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFF51821.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
hypothetical protein
L3_082_090G1_scaffold_505_18
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14591..15760)
DNA (1170bp) protein (390aa)
Uncharacterized protein n=1 Tax=Bacteroides ovatus CL02T12C04 RepID=I8XZJ5_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY56285.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
outer membrane protein/peptidoglycan-associated (lipo)protein
L3_082_090G1_scaffold_505_19
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15802..16068)
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Bacteroides ovatus CL02T12C04 RepID=I9SJV7_BACOV
DNA-binding protein HU {ECO:0000313|EMBL:KDS22858.1}; TaxID=1339346 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus str. 3725 D1 iv.;"
putative histone-like DNA-binding protein
L3_082_090G1_scaffold_505_20
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16100..18709)
DNA (2610bp) protein (870aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 3_1_23 RepID=D7K561_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI38296.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
L3_082_090G1_scaffold_505_21
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18739..21270)
DNA (2532bp) protein (844aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 3_1_23 RepID=D7K560_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI38295.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
L3_082_090G1_scaffold_505_22
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21298..23325)
DNA (2028bp) protein (676aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 3_1_23 RepID=D7K559_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI38294.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
hypothetical protein
L3_082_090G1_scaffold_505_23
Bacteroides ovatus CAG:22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23353..24327)
DNA (975bp) protein (325aa)
Putative lipoprotein n=3 Tax=Bacteroides RepID=D4WI29_BACOV
Putative lipoprotein {ECO:0000313|EMBL:CDB59422.1}; TaxID=1263050 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides ovatus CAG:22.;"
hypothetical protein
L3_082_090G1_scaffold_505_24
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24614..26194)
DNA (1581bp) protein (527aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 3_1_23 RepID=D7K557_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI38292.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
hypothetical protein
L3_082_090G1_scaffold_505_25
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26254..27555)
DNA (1302bp) protein (434aa)
Putative uncharacterized protein n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WI27_BACOV
Putative uncharacterized protein {ECO:0000313|EMBL:EFF51813.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
hypothetical protein
L3_082_090G1_scaffold_505_26
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27563..28132)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Bacteroides ovatus CL02T12C04 RepID=I9SKK9_BACOV
Uncharacterized protein {ECO:0000313|EMBL:KDS22866.1}; TaxID=1339346 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus str. 3725 D1 iv.;"
hypothetical protein
L3_082_090G1_scaffold_505_27
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28416..29315
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Bacteroides ovatus CL02T12C04 RepID=I9H9E4_BACOV
Bacterial regulatory helix-turn-helix s, AraC family protein {ECO:0000313|EMBL:KDS14986.1}; TaxID=1339286 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3725 D9 ii.;"
transcriptional regulator, AraC family
L3_082_090G1_scaffold_505_28
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29503..29841)
DNA (339bp) protein (113aa)
Tyrosine type site-specific recombinase n=1 Tax=Bacteroides sp. 4_1_36 RepID=E5V990_9BACE
Tyrosine type site-specific recombinase {ECO:0000313|EMBL:EFV26535.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
hypothetical protein
L3_082_090G1_scaffold_505_29
Bacteroides finegoldii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29963..30127
DNA (165bp) protein (55aa)
Site-specific recombinase, phage integrase family n=1 Tax=Bacteroides finegoldii DSM 17565 RepID=C9L373_9BACE
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EEX43255.1}; TaxID=483215 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides finegoldii DSM 17565.;"
hypothetical protein
Displaying 29 items

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