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L3_082_090G1_scaffold_580

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_082_090G1_scaffold_580_1
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(148..687)
DNA (540bp) protein (180aa)
RNA polymerase sigma-70 factor n=7 Tax=Bacteroidales RepID=C7XFM3_9PORP
ECF-type sigma factor
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:EFI06876.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L3_082_090G1_scaffold_580_2
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

945..3200
DNA (2256bp) protein (752aa)
Phosphate sodium symporter n=4 Tax=Bacteroidales RepID=D7IWX9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EKN19161.1}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
phosphate/sulfate permease
L3_082_090G1_scaffold_580_3
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3257..4129)
DNA (873bp) protein (291aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=E1YQV8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EFK64033.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
hypothetical protein
L3_082_090G1_scaffold_580_4
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4281..5669
DNA (1389bp) protein (463aa)
Uncharacterized protein n=4 Tax=Bacteroidales RepID=K5ZRL3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN25501.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
hypothetical protein
L3_082_090G1_scaffold_580_5
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5704..6492
DNA (789bp) protein (263aa)
Phosphonoacetaldehyde hydrolase {ECO:0000256|HAMAP-Rule:MF_01375}; Short=Phosphonatase {ECO:0000256|HAMAP-Rule:MF_01375};; EC=3.11.1.1 {ECO:0000256|HAMAP-Rule:MF_01375};; Phosphonoacetaldehyde phosphonohydrolase {ECO:0000256|HAMAP-Rule:MF_01375}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
Phosphonoacetaldehyde hydrolase n=2 Tax=Parabacteroides RepID=E1YQV6_9PORP
phosphonoacetaldehyde hydrolase
L3_082_090G1_scaffold_580_6
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6524..7609
DNA (1086bp) protein (362aa)
2-aminoethylphosphonate--pyruvate transaminase {ECO:0000256|HAMAP-Rule:MF_01376, ECO:0000256|SAAS:SAAS00009569}; EC=2.6.1.37 {ECO:0000256|HAMAP-Rule:MF_01376, ECO:0000256|SAAS:SAAS00009569};; 2-aminoethylphosphonate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01376}; AEP transaminase {ECO:0000256|HAMAP-Rule:MF_01376}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
2-aminoethylphosphonate--pyruvate transaminase n=3 Tax=Parabacteroides RepID=A6LFV0_PARD8
2-aminoethylphosphonate--pyruvate transaminase
L3_082_090G1_scaffold_580_7
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7593..8222)
DNA (630bp) protein (210aa)
WbqC-like protein n=4 Tax=Bacteroidales RepID=C7XFL7_9PORP
Putative uncharacterized protein {ECO:0000313|EMBL:EFI06882.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
hypothetical protein
L3_082_090G1_scaffold_580_8
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8225..9085)
DNA (861bp) protein (287aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
Signal peptidase I n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6ILN8_9PORP
signal peptidase I
L3_082_090G1_scaffold_580_9
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9105..10502)
DNA (1398bp) protein (466aa)
Signal peptidase I {ECO:0000313|EMBL:EEU49387.1}; EC=3.4.21.89 {ECO:0000313|EMBL:EEU49387.1};; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
Signal peptidase I n=1 Tax=Parabacteroides sp. D13 RepID=C7XFL5_9PORP
signal peptidase I
L3_082_090G1_scaffold_580_10
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10519..11235)
DNA (717bp) protein (239aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|SAAS:SAAS00018107}; EC=1.17.1.8 {ECO:0000256|SAAS:SAAS00018107};; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
Dihydrodipicolinate reductase n=1 Tax=Parabacteroides sp. D13 RepID=C7XFL4_9PORP
dihydrodipicolinate reductase
L3_082_090G1_scaffold_580_11
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11312..12592
DNA (1281bp) protein (427aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IWY8_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI06886.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
hypothetical protein
L3_082_090G1_scaffold_580_12
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12576..12944)
DNA (369bp) protein (123aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IWY9_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI06887.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L3_082_090G1_scaffold_580_13
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12928..13173)
DNA (246bp) protein (82aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IWZ0_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI06888.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
hypothetical protein
L3_082_090G1_scaffold_580_14
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13240..13992)
DNA (753bp) protein (251aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IWZ1_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI06889.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
hypothetical protein
L3_082_090G1_scaffold_580_15
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14840..16753
DNA (1914bp) protein (638aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6ILN3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDB50195.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
hypothetical protein
L3_082_090G1_scaffold_580_16
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16695..17561
DNA (867bp) protein (289aa)
Uncharacterized protein n=7 Tax=Bacteroidales RepID=A6LFT8_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFK64021.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
L3_082_090G1_scaffold_580_17
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17642..18049)
DNA (408bp) protein (136aa)
Phenylacetic acid degradation protein PaaD n=5 Tax=Parabacteroides RepID=K5ZSV0_9PORP
phenylacetic acid degradation protein
Putative phenylacetic acid degradation protein PaaD {ECO:0000313|EMBL:EEU49376.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_082_090G1_scaffold_580_18
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18075..19550)
DNA (1476bp) protein (492aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase n=2 Tax=Parabacteroides RepID=C7XFK3_9PORP
L3_082_090G1_scaffold_580_19
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19641..22007)
DNA (2367bp) protein (789aa)
Efflux ABC transporter, permease protein n=1 Tax=Parabacteroides sp. D13 RepID=C7XFK2_9PORP
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EEU49374.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
ABC transporter membrane protein
L3_082_090G1_scaffold_580_20
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22161..23570
DNA (1410bp) protein (470aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis CL03T12C09 RepID=K5YWY5_9PORP
Sigma-54 interaction domain protein {ECO:0000313|EMBL:EEU49373.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
two-component system response regulator
L3_082_090G1_scaffold_580_21
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23567..24835
DNA (1269bp) protein (423aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Parabacteroides sp. D13 RepID=C7XFK0_9PORP
two-component system sensor histidine kinase
L3_082_090G1_scaffold_580_22
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25087..26853
DNA (1767bp) protein (589aa)
Alpha-1,3-galactosidase B {ECO:0000313|EMBL:EEU49371.1}; EC=3.2.1.22 {ECO:0000313|EMBL:EEU49371.1};; EC=3.2.1.n1 {ECO:0000313|EMBL:EEU49371.1};; EC=3.2.1.n2 {ECO:0000313|EMBL:EEU49371.1};; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
Alpha-1,3-galactosidase B n=1 Tax=Parabacteroides sp. D13 RepID=C7XFJ9_9PORP
ATP/GTP-binding site
L3_082_090G1_scaffold_580_23
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26843..27628
DNA (786bp) protein (262aa)
PAP2 family protein n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IX00_9BACE
PAP2 family protein {ECO:0000313|EMBL:EFI06898.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
hypothetical protein
L3_082_090G1_scaffold_580_24
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27658..29175)
DNA (1518bp) protein (506aa)
GH3 auxin-responsive promoter n=3 Tax=Parabacteroides RepID=C7XFJ7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN29643.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
auxin-regulated protein
L3_082_090G1_scaffold_580_25
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29256..30269
DNA (1014bp) protein (338aa)
6-phosphofructokinase (EC:2.7.1.11)
6-phosphofructokinase n=7 Tax=Bacteroidales RepID=C7XFJ6_9PORP
6-phosphofructokinase 3 {ECO:0000313|EMBL:EKN29644.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
L3_082_090G1_scaffold_580_26
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30334..32928)
DNA (2595bp) protein (865aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D13 RepID=C7XFJ5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEU49367.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
extracellular protease
L3_082_090G1_scaffold_580_27
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33010..33852)
DNA (843bp) protein (281aa)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
Ribonuclease 3 n=3 Tax=Bacteroidales RepID=C7XFJ4_9PORP
ribonuclease III
L3_082_090G1_scaffold_580_28
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33854..35119)
DNA (1266bp) protein (422aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=5 Tax=Bacteroidales RepID=A6LFS6_PARD8
3-oxoacyl-ACP synthase
L3_082_090G1_scaffold_580_29
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35141..35377)
DNA (237bp) protein (79aa)
Acyl carrier protein n=14 Tax=Bacteroidales RepID=A7AHB2_9PORP
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
acpP; acyl carrier protein
Displaying 29 items

View Taxonomy