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L3_082_090G1_scaffold_953

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_082_090G1_scaffold_953_1
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(71..481)
DNA (411bp) protein (137aa)
50S ribosomal protein L22 n=28 Tax=Bacteroides RepID=RL22_BACFN
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=1339308 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3774 T13.;"
50S ribosomal protein L22
L3_082_090G1_scaffold_953_2
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(517..786)
DNA (270bp) protein (90aa)
30S ribosomal protein S19 n=16 Tax=Bacteroides RepID=RS19_BACFN
30S ribosomal protein S19
30S ribosomal protein S19 {ECO:0000313|EMBL:KER56875.1}; TaxID=817 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis.;"
L3_082_090G1_scaffold_953_3
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(794..1525)
DNA (732bp) protein (244aa)
50S ribosomal protein L2 n=13 Tax=Bacteroides RepID=RL2_BACFN
rplB; putative 50S ribosomal protein L2
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=997881 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL05T12C13.;"
L3_082_090G1_scaffold_953_4
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1550..1711)
DNA (162bp) protein (54aa)
50S ribosomal protein L23 n=3 Tax=Bacteroides fragilis RepID=E4W106_BACFG
rplW; putative 50S ribosomal protein L23
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369}; TaxID=1339335 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3-F-2 #6.;"
L3_082_090G1_scaffold_953_5
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1728..2354)
DNA (627bp) protein (209aa)
50S ribosomal protein L4 n=16 Tax=Bacteroides RepID=RL4_BACFN
rplD; putative 50S ribosomal protein L4
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=457424 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis 3_1_12.;"
L3_082_090G1_scaffold_953_6
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2354..2971)
DNA (618bp) protein (206aa)
50S ribosomal protein L3 n=16 Tax=Bacteroides RepID=RL3_BACFN
rplC; putative 50S ribosomal protein L3
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=457424 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis 3_1_12.;"
L3_082_090G1_scaffold_953_7
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(2990..3295)
DNA (306bp) protein (102aa)
30S ribosomal protein S10 n=16 Tax=Bacteroides RepID=RS10_BACFN
rpsJ; putative 30S ribosomal protein S10
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=997881 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL05T12C13.;"
L3_082_090G1_scaffold_953_8
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3377..5473)
DNA (2097bp) protein (699aa)
Elongation factor G n=12 Tax=Bacteroides RepID=EFG_BACFN
fusA; putative translation elongation factor G
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=1339280 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 2-F-2 #4.;"
L3_082_090G1_scaffold_953_9
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(5508..5984)
DNA (477bp) protein (159aa)
30S ribosomal protein S7 n=15 Tax=Bacteroides RepID=RS7_BACFN
rpsG; putative 30S ribosomal protein S7
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=997878 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL03T00C08.;"
L3_082_090G1_scaffold_953_10
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(6144..6545)
DNA (402bp) protein (134aa)
30S ribosomal protein S12 n=26 Tax=root RepID=RS12_BACFN
rpsL; putative 30S ribosomal protein S12
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=457424 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis 3_1_12.;"
L3_082_090G1_scaffold_953_11
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(6793..7104)
DNA (312bp) protein (104aa)
Uncharacterized protein n=14 Tax=Bacteroides RepID=E1WPD8_BACF6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EXY72641.1}; TaxID=1339315 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3988T(B)14.;"
L3_082_090G1_scaffold_953_12
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7418..7678)
DNA (261bp) protein (87aa)
Uncharacterized protein n=9 Tax=Bacteroides RepID=E1WPD9_BACF6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EXZ42603.1}; TaxID=1339280 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 2-F-2 #4.;"
L3_082_090G1_scaffold_953_13
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(7741..7986)
DNA (246bp) protein (82aa)
Uncharacterized protein n=17 Tax=Bacteroides RepID=Q64NK1_BACFR
putative transmembrane protein, transglycosylase associated
Uncharacterized protein {ECO:0000313|EMBL:BAD50931.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
L3_082_090G1_scaffold_953_14
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8178..8687
DNA (510bp) protein (170aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=Q64NK0_BACFR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EXZ26666.1}; TaxID=1339327 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S36L11.;"
L3_082_090G1_scaffold_953_15
Bacteroides sp. 2_1_16, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8817..9953
DNA (1137bp) protein (379aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=C6IBK7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEZ24355.1}; TaxID=469587 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_16.;"
putative transmembrane protein
L3_082_090G1_scaffold_953_16
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10030..14313)
DNA (4284bp) protein (1428aa)
rpoC; putative DNA-directed RNA polymerase beta' chain (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1339327 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S36L11.;"
DNA-directed RNA polymerase subunit beta' n=4 Tax=Bacteroides RepID=RPOC_BACFN
L3_082_090G1_scaffold_953_17
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14460..18272)
DNA (3813bp) protein (1271aa)
rpoB; putative DNA-directed RNA polymerase beta chain (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=1339310 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3783N1-6.;"
DNA-directed RNA polymerase subunit beta n=28 Tax=root RepID=RPOB_BACFN
L3_082_090G1_scaffold_953_18
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(18377..18760)
DNA (384bp) protein (128aa)
50S ribosomal protein L7/L12 n=16 Tax=Bacteroides RepID=RL7_BACFN
rplL; putative 50S ribosomal protein L7/L12
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=457424 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis 3_1_12.;"
Displaying 18 items

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